RNA–Protein interactions for RNA: ENST00000638154.2

TCF4-290, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 7,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-290ENST00000638154 RNF217Q8TC41 542 aa6.34□□□□□ -1.4
TCF4-290ENST00000638154 NISCHQ9Y2I1 1504 aa6.33□□□□□ -1.4
TCF4-290ENST00000638154 ERC2O15083 957 aa6.33□□□□□ -1.4
TCF4-290ENST00000638154 FERP16591 822 aa6.33□□□□□ -1.4
TCF4-290ENST00000638154 ATP6V1E1P36543 226 aa6.33□□□□□ -1.4
TCF4-290ENST00000638154 ACBD5Q5T8D3 534 aaPredicted RBP6.33□□□□□ -1.4
TCF4-290ENST00000638154 CCDC63Q8NA47 563 aa6.33□□□□□ -1.4
TCF4-290ENST00000638154 SMARCE1Q969G3 411 aa6.33□□□□□ -1.4
TCF4-290ENST00000638154 GFAPP14136 432 aa6.33□□□□□ -1.4
TCF4-290ENST00000638154 TRAIPQ9BWF2 469 aa6.33□□□□□ -1.4
TCF4-290ENST00000638154 CDKL5O76039 1030 aa6.33□□□□□ -1.4
TCF4-290ENST00000638154 ZFXP17010 805 aaPredicted RBP6.33□□□□□ -1.4
TCF4-290ENST00000638154 KIF5AQ12840 1032 aa6.33□□□□□ -1.4
TCF4-290ENST00000638154 SLC4A8Q2Y0W8 1093 aa6.33□□□□□ -1.4
TCF4-290ENST00000638154 RABL2AQ9UBK7 228 aaPredicted RBP6.33□□□□□ -1.4
TCF4-290ENST00000638154 IPO5O00410 1097 aaKnown RBP6.33□□□□□ -1.4
TCF4-290ENST00000638154 CREB3O43889 395 aa6.33□□□□□ -1.4
TCF4-290ENST00000638154 EPSTI1Q96J88 318 aa6.33□□□□□ -1.4
TCF4-290ENST00000638154 TMEM51Q9NW97 253 aa6.33□□□□□ -1.4
TCF4-290ENST00000638154 STK24Q9Y6E0 443 aa6.33□□□□□ -1.4
TCF4-290ENST00000638154 USH1CQ9Y6N9 552 aa6.33□□□□□ -1.4
TCF4-290ENST00000638154 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.33□□□□□ -1.44e-7■■■■■ 58.1
TCF4-290ENST00000638154 ATP2C2O75185 946 aa6.33□□□□□ -1.4
TCF4-290ENST00000638154 OLFML1Q6UWY5 402 aa6.33□□□□□ -1.4
TCF4-290ENST00000638154 ZNF280CQ8ND82 737 aa6.33□□□□□ -1.4
TCF4-290ENST00000638154 GBP3Q9H0R5 595 aa6.33□□□□□ -1.4
TCF4-290ENST00000638154 EBAG9O00559 213 aa6.32□□□□□ -1.4
TCF4-290ENST00000638154 EGFL6Q8IUX8 553 aa6.32□□□□□ -1.4
TCF4-290ENST00000638154 TRIM5Q9C035 493 aa6.32□□□□□ -1.4
TCF4-290ENST00000638154 MACROD2A1Z1Q3 448 aa6.32□□□□□ -1.4
TCF4-290ENST00000638154 GMNNO75496 209 aa6.32□□□□□ -1.4
TCF4-290ENST00000638154 MCM5P33992 734 aa6.32□□□□□ -1.4
TCF4-290ENST00000638154 TRAF1Q13077 416 aa6.32□□□□□ -1.4
TCF4-290ENST00000638154 TMED1Q13445 227 aa6.32□□□□□ -1.4
TCF4-290ENST00000638154 TTC19Q6DKK2 380 aaPredicted RBP6.32□□□□□ -1.4
TCF4-290ENST00000638154 CCDC174Q6PII3 467 aa6.32□□□□□ -1.4
TCF4-290ENST00000638154 USP33Q8TEY7 942 aa6.32□□□□□ -1.4
TCF4-290ENST00000638154 TONSLQ96HA7 1378 aa6.32□□□□□ -1.4
TCF4-290ENST00000638154 PSMD7P51665 324 aa6.32□□□□□ -1.4
TCF4-290ENST00000638154 LMNTD2Q8IXW0 634 aa6.32□□□□□ -1.4
TCF4-290ENST00000638154 KLHDC4Q8TBB5 520 aa6.32□□□□□ -1.4
TCF4-290ENST00000638154 SMARCC1Q92922 1105 aaPredicted RBP6.32□□□□□ -1.4
TCF4-290ENST00000638154 GFM2Q969S9 779 aaKnown RBP6.32□□□□□ -1.4
TCF4-290ENST00000638154 NUB1Q9Y5A7 615 aa6.32□□□□□ -1.4
TCF4-290ENST00000638154 ZNF131P52739 623 aa6.32□□□□□ -1.4
TCF4-290ENST00000638154 HYPKQ9NX55 129 aa6.32□□□□□ -1.4
TCF4-290ENST00000638154 SEPT10Q9P0V9 454 aa6.32□□□□□ -1.4
TCF4-290ENST00000638154 ROCK1Q13464 1354 aa6.32□□□□□ -1.4
TCF4-290ENST00000638154 CC2D2BQ6DHV5 1058 aa6.32□□□□□ -1.4
TCF4-290ENST00000638154 SHQ1Q6PI26 577 aaKnown RBP6.32□□□□□ -1.4
TCF4-290ENST00000638154 VPS37CA5D8V6 355 aaPredicted RBP6.32□□□□□ -1.4
TCF4-290ENST00000638154 PLCB4Q15147 1175 aa6.32□□□□□ -1.4
TCF4-290ENST00000638154 MIER3Q7Z3K6 550 aa6.32□□□□□ -1.4
TCF4-290ENST00000638154 CCDC50Q8IVM0 306 aa6.32□□□□□ -1.4
TCF4-290ENST00000638154 CEP112Q8N8E3 955 aa6.32□□□□□ -1.4
TCF4-290ENST00000638154 CCDC144CPQ8IYA2 1237 aa6.31□□□□□ -1.4
TCF4-290ENST00000638154 C17orf50Q8WW18 174 aa6.31□□□□□ -1.4
TCF4-290ENST00000638154 PCK1P35558 622 aa6.31□□□□□ -1.4
TCF4-290ENST00000638154 C16orf87Q6PH81 154 aa6.31□□□□□ -1.4
TCF4-290ENST00000638154 CDK5RAP3Q96JB5 506 aa6.31□□□□□ -1.4
TCF4-290ENST00000638154 TCEAL9Q9UHQ7 104 aa6.31□□□□□ -1.4
TCF4-290ENST00000638154 KDM2AQ9Y2K7 1162 aa6.31□□□□□ -1.4
TCF4-290ENST00000638154 ZNF189O75820 626 aaPredicted RBP6.31□□□□□ -1.4
TCF4-290ENST00000638154 FOXD4Q12950 439 aaPredicted RBP6.31□□□□□ -1.4
TCF4-290ENST00000638154 GRM1Q13255 1194 aa6.31□□□□□ -1.4
TCF4-290ENST00000638154 FBXO9Q9UK97 447 aaPredicted RBP6.31□□□□□ -1.4
TCF4-290ENST00000638154 TPP2P29144 1249 aaPredicted RBP6.31□□□□□ -1.4
TCF4-290ENST00000638154 KIF11P52732 1056 aa6.31□□□□□ -1.4
TCF4-290ENST00000638154 NEDD9Q14511 834 aa6.31□□□□□ -1.4
TCF4-290ENST00000638154 GTF3C6Q969F1 213 aa6.31□□□□□ -1.4
TCF4-290ENST00000638154 FBXO2Q9UK22 296 aaPredicted RBP6.31□□□□□ -1.4
TCF4-290ENST00000638154 NEMFO60524 1076 aa6.31□□□□□ -1.4
TCF4-290ENST00000638154 CAVIN2O95810 425 aa6.31□□□□□ -1.4
TCF4-290ENST00000638154 MCTP2Q6DN12 878 aa6.31□□□□□ -1.4
TCF4-290ENST00000638154 KLHL23Q8NBE8 558 aa6.31□□□□□ -1.4
TCF4-290ENST00000638154 LUC7L2Q9Y383 392 aaKnown RBP6.31□□□□□ -1.4
TCF4-290ENST00000638154 WASHC2CQ9Y4E1 1318 aa6.31□□□□□ -1.4
TCF4-290ENST00000638154 TRHP20396 242 aaPredicted RBP6.31□□□□□ -1.4
TCF4-290ENST00000638154 FAPQ12884 760 aa6.31□□□□□ -1.4
TCF4-290ENST00000638154 SAAL1Q96ER3 474 aa6.31□□□□□ -1.4
TCF4-290ENST00000638154 TTC14Q96N46 770 aa6.31□□□□□ -1.4
TCF4-290ENST00000638154 PPP1R12CQ9BZL4 782 aa6.31□□□□□ -1.4
TCF4-290ENST00000638154 IKQ13123 557 aaPredicted RBP6.3□□□□□ -1.4
TCF4-290ENST00000638154 E2F5Q15329 346 aa6.3□□□□□ -1.4
TCF4-290ENST00000638154 GPR101Q96P66 508 aaPredicted RBP6.3□□□□□ -1.4
TCF4-290ENST00000638154 DRC3Q9H069 523 aa6.3□□□□□ -1.4
TCF4-290ENST00000638154 NINLQ9Y2I6 1382 aa6.3□□□□□ -1.4
TCF4-290ENST00000638154 BRD3Q15059 726 aa6.3□□□□□ -1.4
TCF4-290ENST00000638154 CFAP58Q5T655 872 aa6.3□□□□□ -1.4
TCF4-290ENST00000638154 POTEDQ86YR6 584 aa6.3□□□□□ -1.4
TCF4-290ENST00000638154 SELENOSQ9BQE4 189 aa6.3□□□□□ -1.4
TCF4-290ENST00000638154 ODF2LQ9ULJ1 636 aa6.3□□□□□ -1.4
TCF4-290ENST00000638154 IQSEC3Q9UPP2 1182 aaPredicted RBP6.3□□□□□ -1.4
TCF4-290ENST00000638154 ZSCAN26Q16670 478 aa6.3□□□□□ -1.4
TCF4-290ENST00000638154 JPH2Q9BR39 696 aaPredicted RBP6.3□□□□□ -1.4
TCF4-290ENST00000638154 PANK2Q9BZ23 570 aa6.3□□□□□ -1.4
TCF4-290ENST00000638154 HOOK1Q9UJC3 728 aaKnown RBP6.3□□□□□ -1.4
TCF4-290ENST00000638154 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.3□□□□□ -1.4
TCF4-290ENST00000638154 SH3BP1Q9Y3L3 701 aa6.3□□□□□ -1.4
TCF4-290ENST00000638154 INPP5BP32019 993 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms