RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 AXDND1Q5T1B0 1012 aaPredicted RBP14.39□□□□□ -0.11
CAPN3-221ENST00000638141 MPNDQ8N594 471 aa14.39□□□□□ -0.11
CAPN3-221ENST00000638141 PLEKHF1Q96S99 279 aa14.39□□□□□ -0.11
CAPN3-221ENST00000638141 TRIM35Q9UPQ4 493 aa14.39□□□□□ -0.11
CAPN3-221ENST00000638141 VWDEQ8N2E2 1590 aa14.38□□□□□ -0.11
CAPN3-221ENST00000638141 FER1L4A9Z1Z3 1794 aa14.38□□□□□ -0.11
CAPN3-221ENST00000638141 PLEKHM2Q8IWE5 1019 aa14.38□□□□□ -0.11
CAPN3-221ENST00000638141 NOL10Q9BSC4 688 aaKnown RBP14.38□□□□□ -0.11
CAPN3-221ENST00000638141 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.38□□□□□ -0.11
CAPN3-221ENST00000638141 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.38□□□□□ -0.11
CAPN3-221ENST00000638141 CLGNO14967 610 aa14.38□□□□□ -0.11
CAPN3-221ENST00000638141 U2AF1L5P0DN76 240 aaPredicted RBP14.38□□□□□ -0.11
CAPN3-221ENST00000638141 TNNT1P13805 278 aa14.38□□□□□ -0.11
CAPN3-221ENST00000638141 NOP2P46087 812 aaKnown RBP14.38□□□□□ -0.11
CAPN3-221ENST00000638141 RBM6P78332 1123 aaKnown RBP14.38□□□□□ -0.11
CAPN3-221ENST00000638141 U2AF1Q01081 240 aaKnown RBP eCLIP14.38□□□□□ -0.11
CAPN3-221ENST00000638141 TMX3Q96JJ7 454 aa14.38□□□□□ -0.11
CAPN3-221ENST00000638141 ESF1Q9H501 851 aaKnown RBP14.38□□□□□ -0.11
CAPN3-221ENST00000638141 RPAP1Q9BWH6 1393 aaPredicted RBP14.38□□□□□ -0.11
CAPN3-221ENST00000638141 CDC42BPGQ6DT37 1551 aa14.38□□□□□ -0.11
CAPN3-221ENST00000638141 CLTCQ00610 1675 aaKnown RBP14.37□□□□□ -0.11
CAPN3-221ENST00000638141 WDR33Q9C0J8 1336 aaKnown RBP14.37□□□□□ -0.11
CAPN3-221ENST00000638141 ERICH4A6NGS2 130 aa14.37□□□□□ -0.11
CAPN3-221ENST00000638141 PSEN1P49768 467 aa14.37□□□□□ -0.11
CAPN3-221ENST00000638141 PLCB2Q00722 1185 aa14.37□□□□□ -0.11
CAPN3-221ENST00000638141 USP48Q86UV5 1035 aa14.37□□□□□ -0.11
CAPN3-221ENST00000638141 IL17RAQ96F46 866 aa14.37□□□□□ -0.11
CAPN3-221ENST00000638141 CHAMP1Q96JM3 812 aa14.37□□□□□ -0.11
CAPN3-221ENST00000638141 KIF1BO60333 1816 aa14.37□□□□□ -0.11
CAPN3-221ENST00000638141 RTL1A6NKG5 1358 aa14.37□□□□□ -0.11
CAPN3-221ENST00000638141 ABCC4O15439 1325 aa14.37□□□□□ -0.11
CAPN3-221ENST00000638141 GADD45BO75293 160 aaPredicted RBP14.37□□□□□ -0.11
CAPN3-221ENST00000638141 BMS1Q14692 1282 aaKnown RBP14.37□□□□□ -0.11
CAPN3-221ENST00000638141 ERO1AQ96HE7 468 aa14.37□□□□□ -0.11
CAPN3-221ENST00000638141 RASSF4Q9H2L5 321 aa14.37□□□□□ -0.11
CAPN3-221ENST00000638141 RIMS1Q86UR5 1692 aaKnown RBP14.36□□□□□ -0.11
CAPN3-221ENST00000638141 UBE2HP62256 183 aa14.36□□□□□ -0.11
CAPN3-221ENST00000638141 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.36□□□□□ -0.11
CAPN3-221ENST00000638141 BRMS1Q9HCU9 246 aa14.36□□□□□ -0.11
CAPN3-221ENST00000638141 ANKRD26Q9UPS8 1709 aa14.36□□□□□ -0.11
CAPN3-221ENST00000638141 TXLNBQ8N3L3 684 aa14.36□□□□□ -0.11
CAPN3-221ENST00000638141 AP5Z1O43299 807 aa14.35□□□□□ -0.11
CAPN3-221ENST00000638141 CEBPAP49715 358 aaPredicted RBP14.35□□□□□ -0.11
CAPN3-221ENST00000638141 FBXO3Q9UK99 471 aa14.35□□□□□ -0.11
CAPN3-221ENST00000638141 PPP6R1Q9UPN7 881 aa14.35□□□□□ -0.11
CAPN3-221ENST00000638141 CCDC171Q6TFL3 1326 aa14.35□□□□□ -0.11
CAPN3-221ENST00000638141 ABCC3O15438 1527 aa14.34□□□□□ -0.11
CAPN3-221ENST00000638141 SOX12O15370 315 aa14.34□□□□□ -0.11
CAPN3-221ENST00000638141 DCTPP1Q9H773 170 aa14.34□□□□□ -0.11
CAPN3-221ENST00000638141 TNNT3P45378 269 aaPredicted RBP14.33□□□□□ -0.11
CAPN3-221ENST00000638141 ANAPC15P60006 121 aa14.33□□□□□ -0.11
CAPN3-221ENST00000638141 MAPK8IP2Q13387 824 aaPredicted RBP14.33□□□□□ -0.11
CAPN3-221ENST00000638141 FBXO38Q6PIJ6 1188 aa14.33□□□□□ -0.11
CAPN3-221ENST00000638141 SIRT2Q8IXJ6 389 aa14.33□□□□□ -0.11
CAPN3-221ENST00000638141 RGS12O14924 1447 aa14.33□□□□□ -0.12
CAPN3-221ENST00000638141 ERC2O15083 957 aa14.33□□□□□ -0.12
CAPN3-221ENST00000638141 KNDC1Q76NI1 1749 aa14.33□□□□□ -0.12
CAPN3-221ENST00000638141 C16orf45Q96MC5 204 aaPredicted RBP14.33□□□□□ -0.12
CAPN3-221ENST00000638141 DHX16O60231 1041 aaKnown RBP14.32□□□□□ -0.12
CAPN3-221ENST00000638141 PTGS1P23219 599 aa14.32□□□□□ -0.12
CAPN3-221ENST00000638141 TEX35Q5T0J7 233 aa14.32□□□□□ -0.12
CAPN3-221ENST00000638141 RSPH14Q9UHP6 348 aa14.32□□□□□ -0.12
CAPN3-221ENST00000638141 TUBGCP6Q96RT7 1819 aa14.32□□□□□ -0.12
CAPN3-221ENST00000638141 SSH2Q76I76 1423 aa14.32□□□□□ -0.12
CAPN3-221ENST00000638141 EPB41L2O43491 1005 aaKnown RBP14.32□□□□□ -0.12
CAPN3-221ENST00000638141 HTATSF1O43719 755 aaKnown RBP14.32□□□□□ -0.12
CAPN3-221ENST00000638141 H2AFXP16104 143 aaPredicted RBP14.32□□□□□ -0.12
CAPN3-221ENST00000638141 CERS3Q8IU89 383 aa14.32□□□□□ -0.12
CAPN3-221ENST00000638141 MRPL50Q8N5N7 158 aaKnown RBP14.32□□□□□ -0.12
CAPN3-221ENST00000638141 NAA30Q147X3 362 aaPredicted RBP14.31□□□□□ -0.12
CAPN3-221ENST00000638141 TMEM132AQ24JP5 1023 aa14.31□□□□□ -0.12
CAPN3-221ENST00000638141 ICE2Q659A1 982 aa14.31□□□□□ -0.12
CAPN3-221ENST00000638141 CEP135Q66GS9 1140 aa14.31□□□□□ -0.12
CAPN3-221ENST00000638141 AEBP1Q8IUX7 1158 aa14.31□□□□□ -0.12
CAPN3-221ENST00000638141 API5Q9BZZ5 524 aaKnown RBP14.31□□□□□ -0.12
CAPN3-221ENST00000638141 KCND1Q9NSA2 647 aa14.31□□□□□ -0.12
CAPN3-221ENST00000638141 FAM200AQ8TCP9 573 aa14.31□□□□□ -0.12
CAPN3-221ENST00000638141 ZNF622Q969S3 477 aaKnown RBP eCLIP14.31□□□□□ -0.12
CAPN3-221ENST00000638141 IFT57Q9NWB7 429 aa14.31□□□□□ -0.12
CAPN3-221ENST00000638141 PTPRMP28827 1452 aa14.31□□□□□ -0.12
CAPN3-221ENST00000638141 PTPRCP08575 1304 aa14.3□□□□□ -0.12
CAPN3-221ENST00000638141 SMARCA5O60264 1052 aaPredicted RBP14.3□□□□□ -0.12
CAPN3-221ENST00000638141 CASQ1P31415 396 aa14.3□□□□□ -0.12
CAPN3-221ENST00000638141 CFAP70Q5T0N1 1121 aa14.3□□□□□ -0.12
CAPN3-221ENST00000638141 MYCBPQ99417 103 aaPredicted RBP14.3□□□□□ -0.12
CAPN3-221ENST00000638141 NCAPGQ9BPX3 1015 aa14.3□□□□□ -0.12
CAPN3-221ENST00000638141 CAMSAP1Q5T5Y3 1602 aa14.3□□□□□ -0.12
CAPN3-221ENST00000638141 C3P01024 1663 aa14.3□□□□□ -0.12
CAPN3-221ENST00000638141 KIF2AO00139 706 aaPredicted RBP14.3□□□□□ -0.12
CAPN3-221ENST00000638141 NEMFO60524 1076 aa14.3□□□□□ -0.12
CAPN3-221ENST00000638141 CCDC192P0DO97 292 aa14.3□□□□□ -0.12
CAPN3-221ENST00000638141 MCCP23508 829 aa14.3□□□□□ -0.12
CAPN3-221ENST00000638141 FBXO31Q5XUX0 539 aaPredicted RBP14.3□□□□□ -0.12
CAPN3-221ENST00000638141 ZSCAN25Q6NSZ9 544 aa14.3□□□□□ -0.12
CAPN3-221ENST00000638141 NYAP1Q6ZVC0 841 aa14.3□□□□□ -0.12
CAPN3-221ENST00000638141 ZNF446Q9NWS9 450 aa14.3□□□□□ -0.12
CAPN3-221ENST00000638141 ZNF215Q9UL58 517 aaPredicted RBP14.3□□□□□ -0.12
CAPN3-221ENST00000638141 HDAC5Q9UQL6 1122 aa14.3□□□□□ -0.12
CAPN3-221ENST00000638141 FAM135BQ49AJ0 1406 aa14.29□□□□□ -0.12
CAPN3-221ENST00000638141 TPM4P67936 248 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms