RNA–Protein interactions for RNA: ENST00000637786.1

CHRNA7-231, Transcript of cholinergic receptor nicotinic alpha 7 subunit, human

TSL 1 (best)

Gene CHRNA7, Length 383 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNA7-231	ENST00000637786	PIGB	Q92521	554 aa		29.38	■■■□□ 2.29
CHRNA7-231	ENST00000637786	UPF1	Q92900	1129 aa	Known RBP eCLIP	29.36	■■■□□ 2.29
CHRNA7-231	ENST00000637786	RGPD3	A6NKT7	1758 aa	Predicted RBP	29.36	■■■□□ 2.29
CHRNA7-231	ENST00000637786	RGPD4	Q7Z3J3	1758 aa		29.36	■■■□□ 2.29
CHRNA7-231	ENST00000637786	SF3B2	Q13435	895 aa	Known RBP	29.35	■■■□□ 2.29
CHRNA7-231	ENST00000637786	PAPPA	Q13219	1627 aa		29.33	■■■□□ 2.29
CHRNA7-231	ENST00000637786	APBA3	O96018	575 aa		29.32	■■■□□ 2.28
CHRNA7-231	ENST00000637786	CALD1	Q05682	793 aa	Known RBP	29.32	■■■□□ 2.28
CHRNA7-231	ENST00000637786	SMARCC1	Q92922	1105 aa	Predicted RBP	29.32	■■■□□ 2.28
CHRNA7-231	ENST00000637786	THUMPD2	Q9BTF0	503 aa	Known RBP	29.32	■■■□□ 2.28
CHRNA7-231	ENST00000637786	PLSCR1	O15162	318 aa		29.31	■■■□□ 2.28
CHRNA7-231	ENST00000637786	TAF7	Q15545	349 aa	Predicted RBP	29.31	■■■□□ 2.28
CHRNA7-231	ENST00000637786	WWC1	Q8IX03	1113 aa		29.31	■■■□□ 2.28
CHRNA7-231	ENST00000637786	ATG3	Q9NT62	314 aa		29.29	■■■□□ 2.28
CHRNA7-231	ENST00000637786	BABAM1	Q9NWV8	329 aa		29.29	■■■□□ 2.28
CHRNA7-231	ENST00000637786	LY75	O60449	1722 aa		29.28	■■■□□ 2.28
CHRNA7-231	ENST00000637786	BAG6	P46379	1132 aa		29.28	■■■□□ 2.28
CHRNA7-231	ENST00000637786	ASAP1	Q9ULH1	1129 aa		29.28	■■■□□ 2.28
CHRNA7-231	ENST00000637786	SENP3-EIF4A1	A0A087X0R7	540 aa		29.27	■■■□□ 2.28
CHRNA7-231	ENST00000637786	BTBD11	A6QL63	1104 aa		29.27	■■■□□ 2.28
CHRNA7-231	ENST00000637786	PALLD	Q8WX93	1383 aa		29.26	■■■□□ 2.28
CHRNA7-231	ENST00000637786	UBR2	Q8IWV8	1755 aa		29.26	■■■□□ 2.28
CHRNA7-231	ENST00000637786	WDR63	Q8IWG1	891 aa		29.26	■■■□□ 2.27
CHRNA7-231	ENST00000637786	KDM3B	Q7LBC6	1761 aa		29.26	■■■□□ 2.27
CHRNA7-231	ENST00000637786	IL16	Q14005	1332 aa		29.24	■■■□□ 2.27
CHRNA7-231	ENST00000637786	ZNF521	Q96K83	1311 aa		29.24	■■■□□ 2.27
CHRNA7-231	ENST00000637786	SALL2	Q9Y467	1007 aa	Predicted RBP	29.24	■■■□□ 2.27
CHRNA7-231	ENST00000637786	ZNF831	Q5JPB2	1677 aa		29.24	■■■□□ 2.27
CHRNA7-231	ENST00000637786	ZNF790	Q6PG37	636 aa		29.23	■■■□□ 2.27
CHRNA7-231	ENST00000637786	CFAP44	Q96MT7	982 aa		29.23	■■■□□ 2.27
CHRNA7-231	ENST00000637786	CHL1	O00533	1208 aa		29.22	■■■□□ 2.27
CHRNA7-231	ENST00000637786	TTC5	Q8N0Z6	440 aa		29.22	■■■□□ 2.27
CHRNA7-231	ENST00000637786	CAMKK2	Q96RR4	588 aa		29.22	■■■□□ 2.27
CHRNA7-231	ENST00000637786	IFT57	Q9NWB7	429 aa		29.22	■■■□□ 2.27
CHRNA7-231	ENST00000637786	KCP	Q6ZWJ8	1503 aa		29.21	■■■□□ 2.27
CHRNA7-231	ENST00000637786	SLC39A6	Q13433	755 aa		29.21	■■■□□ 2.27
CHRNA7-231	ENST00000637786	SOCS7	O14512	581 aa		29.2	■■■□□ 2.26
CHRNA7-231	ENST00000637786	ZNF853	P0CG23	659 aa		29.2	■■■□□ 2.26
CHRNA7-231	ENST00000637786	GNAI1	P63096	354 aa		29.2	■■■□□ 2.26
CHRNA7-231	ENST00000637786	HNRNPU	Q00839	825 aa	Known RBP eCLIP	29.2	■■■□□ 2.26
CHRNA7-231	ENST00000637786	EN1	Q05925	392 aa	Predicted RBP	29.19	■■■□□ 2.26
CHRNA7-231	ENST00000637786	SLC27A3	Q5K4L6	730 aa		29.19	■■■□□ 2.26
CHRNA7-231	ENST00000637786	DEFB132	Q7Z7B7	95 aa		29.19	■■■□□ 2.26
CHRNA7-231	ENST00000637786	TSPYL4	Q9UJ04	414 aa		29.19	■■■□□ 2.26
CHRNA7-231	ENST00000637786	CIC	Q96RK0	1608 aa	Predicted RBP	29.19	■■■□□ 2.26
CHRNA7-231	ENST00000637786	RREB1	Q92766	1687 aa		29.18	■■■□□ 2.26
CHRNA7-231	ENST00000637786	LOC102724428	A0A0B4J2F2	783 aa		29.17	■■■□□ 2.26
CHRNA7-231	ENST00000637786	HMGB2	P26583	209 aa	Known RBP	29.17	■■■□□ 2.26
CHRNA7-231	ENST00000637786	SIK1	P57059	783 aa		29.17	■■■□□ 2.26
CHRNA7-231	ENST00000637786	TXNRD1	Q16881	649 aa		29.17	■■■□□ 2.26
CHRNA7-231	ENST00000637786	MIS18A	Q9NYP9	233 aa		29.17	■■■□□ 2.26
CHRNA7-231	ENST00000637786	PROM2	Q8N271	834 aa		29.16	■■■□□ 2.26
CHRNA7-231	ENST00000637786	KCNQ3	O43525	872 aa		29.15	■■■□□ 2.26
CHRNA7-231	ENST00000637786	EZH2	Q15910	746 aa	Known RBP	29.15	■■■□□ 2.26
CHRNA7-231	ENST00000637786	VSIG10	Q8N0Z9	540 aa		29.15	■■■□□ 2.26
CHRNA7-231	ENST00000637786	FMNL2	Q96PY5	1086 aa		29.15	■■■□□ 2.26
CHRNA7-231	ENST00000637786	LAS1L	Q9Y4W2	734 aa	Known RBP	29.15	■■■□□ 2.26
CHRNA7-231	ENST00000637786	PTCD1	O75127	700 aa	Known RBP	29.14	■■■□□ 2.26
CHRNA7-231	ENST00000637786	ZNF496	Q96IT1	587 aa	Predicted RBP	29.14	■■■□□ 2.26
CHRNA7-231	ENST00000637786	RBM42	Q9BTD8	480 aa	Known RBP	29.14	■■■□□ 2.26
CHRNA7-231	ENST00000637786	CCNL1	Q9UK58	526 aa	Predicted RBP	29.14	■■■□□ 2.26
CHRNA7-231	ENST00000637786	TAF1L	Q8IZX4	1826 aa		29.13	■■■□□ 2.25
CHRNA7-231	ENST00000637786	MBIP	Q9NS73	344 aa		29.13	■■■□□ 2.25
CHRNA7-231	ENST00000637786	HEG1	Q9ULI3	1381 aa		29.13	■■■□□ 2.25
CHRNA7-231	ENST00000637786	EIF4A1	P60842	406 aa	Known RBP	29.12	■■■□□ 2.25
CHRNA7-231	ENST00000637786	GOLGA2	Q08379	1002 aa		29.12	■■■□□ 2.25
CHRNA7-231	ENST00000637786	SLC4A9	Q96Q91	983 aa		29.12	■■■□□ 2.25
CHRNA7-231	ENST00000637786	ZBED9	Q6R2W3	1325 aa		29.12	■■■□□ 2.25
CHRNA7-231	ENST00000637786	NUP188	Q5SRE5	1749 aa		29.11	■■■□□ 2.25
CHRNA7-231	ENST00000637786	TJP1	Q07157	1748 aa		29.11	■■■□□ 2.25
CHRNA7-231	ENST00000637786	C5	P01031	1676 aa		29.1	■■■□□ 2.25
CHRNA7-231	ENST00000637786	ATP6V1A	P38606	617 aa		29.1	■■■□□ 2.25
CHRNA7-231	ENST00000637786	LRRC4B	Q9NT99	713 aa		29.1	■■■□□ 2.25
CHRNA7-231	ENST00000637786	COL5A3	P25940	1745 aa	Predicted RBP	29.09	■■■□□ 2.25
CHRNA7-231	ENST00000637786	MYH16	Q9H6N6	1097 aa		29.09	■■■□□ 2.25
CHRNA7-231	ENST00000637786	TEX13A	Q9BXU3	409 aa	Predicted RBP	29.08	■■■□□ 2.25
CHRNA7-231	ENST00000637786		E9PSI1	815 aa		29.07	■■■□□ 2.24
CHRNA7-231	ENST00000637786	SNRPA1	P09661	255 aa	Known RBP	29.06	■■■□□ 2.24
CHRNA7-231	ENST00000637786	ITPK1	Q13572	414 aa		29.06	■■■□□ 2.24
CHRNA7-231	ENST00000637786	SPINK5	Q9NQ38	1064 aa	Predicted RBP	29.06	■■■□□ 2.24
CHRNA7-231	ENST00000637786	FANCI	Q9NVI1	1328 aa		29.05	■■■□□ 2.24
CHRNA7-231	ENST00000637786	GIGYF1	O75420	1035 aa	Predicted RBP	29.05	■■■□□ 2.24
CHRNA7-231	ENST00000637786	LAMB4	A4D0S4	1761 aa		29.05	■■■□□ 2.24
CHRNA7-231	ENST00000637786	KCNQ4	P56696	695 aa		29.04	■■■□□ 2.24
CHRNA7-231	ENST00000637786	SLFN5	Q08AF3	891 aa		29.04	■■■□□ 2.24
CHRNA7-231	ENST00000637786	TSR2	Q969E8	191 aa	Known RBP	29.04	■■■□□ 2.24
CHRNA7-231	ENST00000637786	C4B	P0C0L5	1744 aa		29.03	■■■□□ 2.24
CHRNA7-231	ENST00000637786	DNAJC10	Q8IXB1	793 aa		29.03	■■■□□ 2.24
CHRNA7-231	ENST00000637786	HOXB7	P09629	217 aa		29.02	■■■□□ 2.24
CHRNA7-231	ENST00000637786	LINC00116	Q8NCU8	138 aa		29.02	■■■□□ 2.24
CHRNA7-231	ENST00000637786	SOS1	Q07889	1333 aa	Predicted RBP	29.01	■■■□□ 2.23
CHRNA7-231	ENST00000637786	CNTNAP4	Q9C0A0	1308 aa		29	■■■□□ 2.23
CHRNA7-231	ENST00000637786	STARD3NL	O95772	234 aa		29	■■■□□ 2.23
CHRNA7-231	ENST00000637786	TRMT2A	Q8IZ69	625 aa	Known RBP	29	■■■□□ 2.23
CHRNA7-231	ENST00000637786	CYP19A1	P11511	503 aa	Predicted RBP	28.99	■■■□□ 2.23
CHRNA7-231	ENST00000637786	RC3H1	Q5TC82	1133 aa	Known RBP	28.99	■■■□□ 2.23
CHRNA7-231	ENST00000637786	CDCA7L	Q96GN5	454 aa		28.99	■■■□□ 2.23
CHRNA7-231	ENST00000637786	MYH14	Q7Z406	1995 aa	Known RBP	28.99	■■■□□ 2.23
CHRNA7-231	ENST00000637786	DUSP27	Q5VZP5	1158 aa		28.97	■■■□□ 2.23
CHRNA7-231	ENST00000637786	USP16	Q9Y5T5	823 aa		28.97	■■■□□ 2.23

Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms