RNA–Protein interactions for RNA: ENST00000637628.1

CHRNA4-220, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-220ENST00000637628 SCYL1Q96KG9 808 aa4.47□□□□□ -1.69
CHRNA4-220ENST00000637628 C8orf48Q96LL4 319 aa4.47□□□□□ -1.69
CHRNA4-220ENST00000637628 NAP1L4Q99733 375 aaKnown RBP4.47□□□□□ -1.69
CHRNA4-220ENST00000637628 PCGF6Q9BYE7 350 aa4.47□□□□□ -1.69
CHRNA4-220ENST00000637628 DDX41Q9UJV9 622 aaKnown RBP4.47□□□□□ -1.69
CHRNA4-220ENST00000637628 BOLA1Q9Y3E2 137 aa4.47□□□□□ -1.69
CHRNA4-220ENST00000637628 CCER2I3L3R5 266 aa4.46□□□□□ -1.7
CHRNA4-220ENST00000637628 PTCD1O75127 700 aaKnown RBP4.46□□□□□ -1.7
CHRNA4-220ENST00000637628 CDC45O75419 566 aa4.46□□□□□ -1.7
CHRNA4-220ENST00000637628 LGR5O75473 907 aa4.46□□□□□ -1.7
CHRNA4-220ENST00000637628 FAM13AO94988 1023 aa4.46□□□□□ -1.7
CHRNA4-220ENST00000637628 LIG1P18858 919 aa4.46□□□□□ -1.7
CHRNA4-220ENST00000637628 PRSS12P56730 875 aa4.46□□□□□ -1.7
CHRNA4-220ENST00000637628 RACK1P63244 317 aaKnown RBP4.46□□□□□ -1.7
CHRNA4-220ENST00000637628 EHHADHQ08426 723 aa4.46□□□□□ -1.7
CHRNA4-220ENST00000637628 LMOD3Q0VAK6 560 aa4.46□□□□□ -1.7
CHRNA4-220ENST00000637628 UBE4AQ14139 1066 aa4.46□□□□□ -1.7
CHRNA4-220ENST00000637628 C6orf132Q5T0Z8 1188 aa4.46□□□□□ -1.7
CHRNA4-220ENST00000637628 CCSAPQ6IQ19 270 aaPredicted RBP4.46□□□□□ -1.7
CHRNA4-220ENST00000637628 HLA-CQ95604 372 aa4.46□□□□□ -1.7
CHRNA4-220ENST00000637628 MKL1Q969V6 931 aa4.46□□□□□ -1.7
CHRNA4-220ENST00000637628 RNPC3Q96LT9 517 aaKnown RBP4.46□□□□□ -1.7
CHRNA4-220ENST00000637628 HINFPQ9BQA5 517 aa4.46□□□□□ -1.7
CHRNA4-220ENST00000637628 PRKD2Q9BZL6 878 aa4.46□□□□□ -1.7
CHRNA4-220ENST00000637628 TMX1Q9H3N1 280 aa4.46□□□□□ -1.7
CHRNA4-220ENST00000637628 FBXO9Q9UK97 447 aaPredicted RBP4.46□□□□□ -1.7
CHRNA4-220ENST00000637628 TRPC6Q9Y210 931 aa4.46□□□□□ -1.7
CHRNA4-220ENST00000637628 NOD1Q9Y239 953 aa4.46□□□□□ -1.7
CHRNA4-220ENST00000637628 RPS6KL1Q9Y6S9 549 aa4.46□□□□□ -1.7
CHRNA4-220ENST00000637628 SSBP05455 408 aaKnown RBP eCLIP4.45□□□□□ -1.7
CHRNA4-220ENST00000637628 EVA1CP58658 441 aa4.45□□□□□ -1.7
CHRNA4-220ENST00000637628 CACNB1Q02641 598 aaPredicted RBP4.45□□□□□ -1.7
CHRNA4-220ENST00000637628 SERINC3Q13530 473 aa4.45□□□□□ -1.7
CHRNA4-220ENST00000637628 BRD3Q15059 726 aa4.45□□□□□ -1.7
CHRNA4-220ENST00000637628 MAP9Q49MG5 647 aa4.45□□□□□ -1.7
CHRNA4-220ENST00000637628 NBPF6Q5VWK0 638 aa4.45□□□□□ -1.7
CHRNA4-220ENST00000637628 FAM43BQ6ZT52 329 aaPredicted RBP4.45□□□□□ -1.7
CHRNA4-220ENST00000637628 SIX5Q8N196 739 aa4.45□□□□□ -1.7
CHRNA4-220ENST00000637628 HELQQ8TDG4 1101 aa4.45□□□□□ -1.7
CHRNA4-220ENST00000637628 CDCA7LQ96GN5 454 aa4.45□□□□□ -1.7
CHRNA4-220ENST00000637628 NBPF4Q96M43 638 aa4.45□□□□□ -1.7
CHRNA4-220ENST00000637628 PHF12Q96QT6 1004 aa4.45□□□□□ -1.7
CHRNA4-220ENST00000637628 MPHOSPH6Q99547 160 aaKnown RBP4.45□□□□□ -1.7
CHRNA4-220ENST00000637628 SENP7Q9BQF6 1050 aa4.45□□□□□ -1.7
CHRNA4-220ENST00000637628 IER2Q9BTL4 223 aa4.45□□□□□ -1.7
CHRNA4-220ENST00000637628 HOMER2Q9NSB8 354 aa4.45□□□□□ -1.7
CHRNA4-220ENST00000637628 CEP126Q9P2H0 1117 aa4.45□□□□□ -1.7
CHRNA4-220ENST00000637628 SFMBT1Q9UHJ3 866 aa4.45□□□□□ -1.7
CHRNA4-220ENST00000637628 SFI1A8K8P3 1242 aa4.44□□□□□ -1.7
CHRNA4-220ENST00000637628 PER1O15534 1290 aaPredicted RBP4.44□□□□□ -1.7
CHRNA4-220ENST00000637628 LDHAP00338 332 aaKnown RBP4.44□□□□□ -1.7
CHRNA4-220ENST00000637628 HSP90AA1P07900 732 aaKnown RBP4.44□□□□□ -1.7
CHRNA4-220ENST00000637628 ATF4P18848 351 aaPredicted RBP4.44□□□□□ -1.7
CHRNA4-220ENST00000637628 GYS2P54840 703 aa4.44□□□□□ -1.7
CHRNA4-220ENST00000637628 HDAC1Q13547 482 aaPredicted RBP4.44□□□□□ -1.7
CHRNA4-220ENST00000637628 AAMPQ13685 434 aa4.44□□□□□ -1.7
CHRNA4-220ENST00000637628 NAA30Q147X3 362 aaPredicted RBP4.44□□□□□ -1.7
CHRNA4-220ENST00000637628 ZRSR2Q15696 482 aaKnown RBP4.44□□□□□ -1.7
CHRNA4-220ENST00000637628 MAP7D1Q3KQU3 841 aa4.44□□□□□ -1.7
CHRNA4-220ENST00000637628 GRIPAP1Q4V328 841 aa4.44□□□□□ -1.7
CHRNA4-220ENST00000637628 PPP4R4Q6NUP7 873 aa4.44□□□□□ -1.7
CHRNA4-220ENST00000637628 CAPN12Q6ZSI9 719 aa4.44□□□□□ -1.7
CHRNA4-220ENST00000637628 AMOTL1Q8IY63 956 aa4.44□□□□□ -1.7
CHRNA4-220ENST00000637628 PTCD2Q8WV60 388 aaKnown RBP4.44□□□□□ -1.7
CHRNA4-220ENST00000637628 CRELD1Q96HD1 420 aa4.44□□□□□ -1.7
CHRNA4-220ENST00000637628 DMRTB1Q96MA1 342 aa4.44□□□□□ -1.7
CHRNA4-220ENST00000637628 SETDB2Q96T68 719 aa4.44□□□□□ -1.7
CHRNA4-220ENST00000637628 EYA1Q99502 592 aa4.44□□□□□ -1.7
CHRNA4-220ENST00000637628 TMEM121BQ9BXQ6 578 aaPredicted RBP4.44□□□□□ -1.7
CHRNA4-220ENST00000637628 TRIM55Q9BYV6 548 aa4.44□□□□□ -1.7
CHRNA4-220ENST00000637628 NEUROD4Q9HD90 331 aa4.44□□□□□ -1.7
CHRNA4-220ENST00000637628 JADE2Q9NQC1 790 aa4.44□□□□□ -1.7
CHRNA4-220ENST00000637628 FANCLQ9NW38 375 aa4.44□□□□□ -1.7
CHRNA4-220ENST00000637628 SIRPGQ9P1W8 387 aa4.44□□□□□ -1.7
CHRNA4-220ENST00000637628 ZRANB1Q9UGI0 708 aa4.44□□□□□ -1.7
CHRNA4-220ENST00000637628 SWAP70Q9UH65 585 aa4.44□□□□□ -1.7
CHRNA4-220ENST00000637628 KIAA1024Q9UPX6 916 aa4.44□□□□□ -1.7
CHRNA4-220ENST00000637628 EID1Q9Y6B2 187 aa4.44□□□□□ -1.7
CHRNA4-220ENST00000637628 KIF3BO15066 747 aa4.43□□□□□ -1.7
CHRNA4-220ENST00000637628 ZNF500O60304 480 aaPredicted RBP4.43□□□□□ -1.7
CHRNA4-220ENST00000637628 NR1I2O75469 434 aa4.43□□□□□ -1.7
CHRNA4-220ENST00000637628 BDNFP23560 247 aa4.43□□□□□ -1.7
CHRNA4-220ENST00000637628 MPSTP25325 297 aa4.43□□□□□ -1.7
CHRNA4-220ENST00000637628 GNALP38405 381 aa4.43□□□□□ -1.7
CHRNA4-220ENST00000637628 GCGRP47871 477 aa4.43□□□□□ -1.7
CHRNA4-220ENST00000637628 GTF2IP78347 998 aa4.43□□□□□ -1.7
CHRNA4-220ENST00000637628 DHX8Q14562 1220 aaKnown RBP4.43□□□□□ -1.7
CHRNA4-220ENST00000637628 DSC3Q14574 896 aa4.43□□□□□ -1.7
CHRNA4-220ENST00000637628 CCDC102BQ68D86 513 aa4.43□□□□□ -1.7
CHRNA4-220ENST00000637628 HS2ST1Q7LGA3 356 aa4.43□□□□□ -1.7
CHRNA4-220ENST00000637628 PAF1Q8N7H5 531 aa4.43□□□□□ -1.7
CHRNA4-220ENST00000637628 TPCN2Q8NHX9 752 aa4.43□□□□□ -1.7
CHRNA4-220ENST00000637628 APPBP2Q92624 585 aa4.43□□□□□ -1.7
CHRNA4-220ENST00000637628 RELTQ969Z4 430 aa4.43□□□□□ -1.7
CHRNA4-220ENST00000637628 IL17RAQ96F46 866 aa4.43□□□□□ -1.7
CHRNA4-220ENST00000637628 JPH4Q96JJ6 628 aa4.43□□□□□ -1.7
CHRNA4-220ENST00000637628 CCDC85AQ96PX6 553 aaPredicted RBP4.43□□□□□ -1.7
CHRNA4-220ENST00000637628 CITED4Q96RK1 184 aa4.43□□□□□ -1.7
CHRNA4-220ENST00000637628 TMEM134Q9H6X4 195 aa4.43□□□□□ -1.7
CHRNA4-220ENST00000637628 PNMA6FA0A0J9YX94 578 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms