RNA–Protein interactions for RNA: ENST00000637616.1

CACNA1A-243, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-243ENST00000637616 PNMA6EA0A0J9YXQ4 647 aa24.52■■□□□ 1.52
CACNA1A-243ENST00000637616 FAM177BA6PVY3 158 aa24.52■■□□□ 1.52
CACNA1A-243ENST00000637616 USP25Q9UHP3 1055 aa24.52■■□□□ 1.52
CACNA1A-243ENST00000637616 CDK12Q9NYV4 1490 aaPredicted RBP24.52■■□□□ 1.52
CACNA1A-243ENST00000637616 PTPRCP08575 1304 aa24.51■■□□□ 1.51
CACNA1A-243ENST00000637616 MAP4K4O95819 1239 aaPredicted RBP24.51■■□□□ 1.51
CACNA1A-243ENST00000637616 HSP90AB2PQ58FF8 381 aa24.51■■□□□ 1.51
CACNA1A-243ENST00000637616 MCM5P33992 734 aa24.51■■□□□ 1.51
CACNA1A-243ENST00000637616 CHMLP26374 656 aa24.5■■□□□ 1.51
CACNA1A-243ENST00000637616 CUL4AQ13619 759 aa24.5■■□□□ 1.51
CACNA1A-243ENST00000637616 OSBPL3Q9H4L5 887 aa24.5■■□□□ 1.51
CACNA1A-243ENST00000637616 TMEM131LA2VDJ0 1609 aa24.5■■□□□ 1.51
CACNA1A-243ENST00000637616 MX1P20591 662 aa24.5■■□□□ 1.51
CACNA1A-243ENST00000637616 KIAA2012Q0VF49 1180 aa24.5■■□□□ 1.51
CACNA1A-243ENST00000637616 TTC12Q9H892 705 aaPredicted RBP24.5■■□□□ 1.51
CACNA1A-243ENST00000637616 CPS1P31327 1500 aa24.5■■□□□ 1.51
CACNA1A-243ENST00000637616 ATP7BP35670 1465 aa24.49■■□□□ 1.51
CACNA1A-243ENST00000637616 EDC4Q6P2E9 1401 aaKnown RBP24.49■■□□□ 1.51
CACNA1A-243ENST00000637616 DYNC1I1O14576 645 aa24.49■■□□□ 1.51
CACNA1A-243ENST00000637616 MCCP23508 829 aa24.48■■□□□ 1.51
CACNA1A-243ENST00000637616 PLCB2Q00722 1185 aa24.48■■□□□ 1.51
CACNA1A-243ENST00000637616 LRRCC1Q9C099 1032 aa24.48■■□□□ 1.51
CACNA1A-243ENST00000637616 IL1RAPL2Q9NP60 686 aa24.48■■□□□ 1.51
CACNA1A-243ENST00000637616 CPSF1Q10570 1443 aaKnown RBP24.48■■□□□ 1.51
CACNA1A-243ENST00000637616 GNAI2P04899 355 aa24.47■■□□□ 1.51
CACNA1A-243ENST00000637616 MAP7D2Q96T17 732 aa24.47■■□□□ 1.51
CACNA1A-243ENST00000637616 TSPYL4Q9UJ04 414 aa24.47■■□□□ 1.51
CACNA1A-243ENST00000637616 CNPY2Q9Y2B0 182 aa24.47■■□□□ 1.51
CACNA1A-243ENST00000637616 MCM2P49736 904 aa24.46■■□□□ 1.51
CACNA1A-243ENST00000637616 SYAP1Q96A49 352 aaPredicted RBP24.46■■□□□ 1.51
CACNA1A-243ENST00000637616 AATKQ6ZMQ8 1374 aa24.46■■□□□ 1.51
CACNA1A-243ENST00000637616 PLEKHG5O94827 1062 aa24.46■■□□□ 1.51
CACNA1A-243ENST00000637616 HAP1P54257 671 aaPredicted RBP24.46■■□□□ 1.51
CACNA1A-243ENST00000637616 HCLS1P14317 486 aaPredicted RBP24.45■■□□□ 1.5
CACNA1A-243ENST00000637616 SRCIN1Q9C0H9 1055 aa24.45■■□□□ 1.5
CACNA1A-243ENST00000637616 PRDM4Q9UKN5 801 aa24.45■■□□□ 1.5
CACNA1A-243ENST00000637616 NUTM1Q86Y26 1132 aa24.44■■□□□ 1.5
CACNA1A-243ENST00000637616 CCDC61Q9Y6R9 512 aa24.44■■□□□ 1.5
CACNA1A-243ENST00000637616 DIP2CQ9Y2E4 1556 aa24.44■■□□□ 1.5
CACNA1A-243ENST00000637616 SALL3Q9BXA9 1300 aa24.43■■□□□ 1.5
CACNA1A-243ENST00000637616 INTS4Q96HW7 963 aaKnown RBP24.43■■□□□ 1.5
CACNA1A-243ENST00000637616 ADCY5O95622 1261 aa24.43■■□□□ 1.5
CACNA1A-243ENST00000637616 CCT4P50991 539 aaKnown RBP24.43■■□□□ 1.5
CACNA1A-243ENST00000637616 FKBP5Q13451 457 aaPredicted RBP24.43■■□□□ 1.5
CACNA1A-243ENST00000637616 KIAA0232Q92628 1395 aa24.41■■□□□ 1.5
CACNA1A-243ENST00000637616 LRRFIP2Q9Y608 721 aaKnown RBP24.41■■□□□ 1.5
CACNA1A-243ENST00000637616 MTHFSDQ2M296 383 aaKnown RBP24.41■■□□□ 1.5
CACNA1A-243ENST00000637616 CPA1P15085 419 aa24.4■■□□□ 1.5
CACNA1A-243ENST00000637616 NOLC1Q14978 699 aaKnown RBP eCLIP24.4■■□□□ 1.5
CACNA1A-243ENST00000637616 WDR33Q9C0J8 1336 aaKnown RBP24.39■■□□□ 1.5
CACNA1A-243ENST00000637616 FIBPO43427 364 aa24.39■■□□□ 1.5
CACNA1A-243ENST00000637616 MLECQ14165 292 aa24.39■■□□□ 1.5
CACNA1A-243ENST00000637616 RTF1Q92541 710 aaKnown RBP24.39■■□□□ 1.49
CACNA1A-243ENST00000637616 PREX1Q8TCU6 1659 aa24.38■■□□□ 1.49
CACNA1A-243ENST00000637616 METP08581 1390 aa24.38■■□□□ 1.49
CACNA1A-243ENST00000637616 PHF14O94880 888 aa24.38■■□□□ 1.49
CACNA1A-243ENST00000637616 ANAPC15P60006 121 aa24.38■■□□□ 1.49
CACNA1A-243ENST00000637616 PRR36Q9H6K5 1346 aa24.38■■□□□ 1.49
CACNA1A-243ENST00000637616 MYRIPQ8NFW9 859 aa24.37■■□□□ 1.49
CACNA1A-243ENST00000637616 CRB1P82279 1406 aa24.37■■□□□ 1.49
CACNA1A-243ENST00000637616 GIMAP6Q6P9H5 292 aa24.37■■□□□ 1.49
CACNA1A-243ENST00000637616 STK31Q9BXU1 1019 aa24.37■■□□□ 1.49
CACNA1A-243ENST00000637616 ATP8B2P98198 1209 aa24.36■■□□□ 1.49
CACNA1A-243ENST00000637616 FLIIQ13045 1269 aa24.36■■□□□ 1.49
CACNA1A-243ENST00000637616 TCHHQ07283 1943 aa24.36■■□□□ 1.49
CACNA1A-243ENST00000637616 RPAP1Q9BWH6 1393 aaPredicted RBP24.36■■□□□ 1.49
CACNA1A-243ENST00000637616 PIBF1Q8WXW3 757 aa24.36■■□□□ 1.49
CACNA1A-243ENST00000637616 ZNF710Q8N1W2 664 aa24.36■■□□□ 1.49
CACNA1A-243ENST00000637616 MAP3K19Q56UN5 1328 aa24.35■■□□□ 1.49
CACNA1A-243ENST00000637616 CCDC183Q5T5S1 534 aa24.35■■□□□ 1.49
CACNA1A-243ENST00000637616 RASEFQ8IZ41 740 aa24.35■■□□□ 1.49
CACNA1A-243ENST00000637616 DDX54Q8TDD1 881 aaKnown RBP24.34■■□□□ 1.49
CACNA1A-243ENST00000637616 ZHX1Q9UKY1 873 aaPredicted RBP24.34■■□□□ 1.49
CACNA1A-243ENST00000637616 HSPA4P34932 840 aa24.33■■□□□ 1.49
CACNA1A-243ENST00000637616 AK2P54819 239 aa24.33■■□□□ 1.49
CACNA1A-243ENST00000637616 SYT1P21579 422 aa24.33■■□□□ 1.49
CACNA1A-243ENST00000637616 AP5Z1O43299 807 aa24.33■■□□□ 1.48
CACNA1A-243ENST00000637616 SPC24Q8NBT2 197 aa24.33■■□□□ 1.48
CACNA1A-243ENST00000637616 SPG7Q9UQ90 795 aa24.33■■□□□ 1.48
CACNA1A-243ENST00000637616 CYB5RLQ6IPT4 315 aa24.32■■□□□ 1.48
CACNA1A-243ENST00000637616 MTERF4Q7Z6M4 381 aaKnown RBP24.32■■□□□ 1.48
CACNA1A-243ENST00000637616 ZSCAN22P10073 491 aaPredicted RBP24.32■■□□□ 1.48
CACNA1A-243ENST00000637616 CHMP3Q9Y3E7 222 aa24.32■■□□□ 1.48
CACNA1A-243ENST00000637616 SNX14Q9Y5W7 946 aa24.32■■□□□ 1.48
CACNA1A-243ENST00000637616 TTC21BQ7Z4L5 1316 aa24.31■■□□□ 1.48
CACNA1A-243ENST00000637616 GNAI3P08754 354 aa24.31■■□□□ 1.48
CACNA1A-243ENST00000637616 CBX1P83916 185 aa24.31■■□□□ 1.48
CACNA1A-243ENST00000637616 LARGE1O95461 756 aa24.31■■□□□ 1.48
CACNA1A-243ENST00000637616 STX6O43752 255 aa24.31■■□□□ 1.48
CACNA1A-243ENST00000637616 SURF6O75683 361 aaKnown RBP24.31■■□□□ 1.48
CACNA1A-243ENST00000637616 RUFY3Q7L099 469 aa24.31■■□□□ 1.48
CACNA1A-243ENST00000637616 FAM184AQ8NB25 1140 aa24.31■■□□□ 1.48
CACNA1A-243ENST00000637616 CCDC94Q9BW85 323 aaPredicted RBP24.31■■□□□ 1.48
CACNA1A-243ENST00000637616 STAP2Q9UGK3 403 aa24.31■■□□□ 1.48
CACNA1A-243ENST00000637616 CWC27Q6UX04 472 aaKnown RBP24.3■■□□□ 1.48
CACNA1A-243ENST00000637616 USP44Q9H0E7 712 aa24.29■■□□□ 1.48
CACNA1A-243ENST00000637616 ACEP12821 1306 aa24.29■■□□□ 1.48
CACNA1A-243ENST00000637616 KDM4AO75164 1064 aa24.29■■□□□ 1.48
CACNA1A-243ENST00000637616 DNM1Q05193 864 aaKnown RBP24.29■■□□□ 1.48
CACNA1A-243ENST00000637616 UVSSAQ2YD98 709 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms