RNA–Protein interactions for RNA: ENST00000637594.1

CLN8-214, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 406 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-214ENST00000637594 NLGN1Q8N2Q7 840 aa12.13□□□□□ -0.47
CLN8-214ENST00000637594 ADCY9O60503 1353 aa12.13□□□□□ -0.47
CLN8-214ENST00000637594 GNPATO15228 680 aa12.12□□□□□ -0.47
CLN8-214ENST00000637594 ADRA2BP18089 450 aa12.12□□□□□ -0.47
CLN8-214ENST00000637594 TGFB2P61812 414 aa12.12□□□□□ -0.47
CLN8-214ENST00000637594 PLEKHO1Q53GL0 409 aaPredicted RBP12.12□□□□□ -0.47
CLN8-214ENST00000637594 TRAPPC3LQ5T215 181 aa12.12□□□□□ -0.47
CLN8-214ENST00000637594 SLC4A9Q96Q91 983 aa12.12□□□□□ -0.47
CLN8-214ENST00000637594 UBR3Q6ZT12 1888 aa12.12□□□□□ -0.47
CLN8-214ENST00000637594 EIF4G2P78344 907 aaKnown RBP eCLIP12.11□□□□□ -0.47
CLN8-214ENST00000637594 PANK3Q9H999 370 aa12.11□□□□□ -0.47
CLN8-214ENST00000637594 RTCBQ9Y3I0 505 aaKnown RBP12.11□□□□□ -0.47
CLN8-214ENST00000637594 ATP10DQ9P241 1426 aa12.11□□□□□ -0.47
CLN8-214ENST00000637594 KDRP35968 1356 aa12.1□□□□□ -0.47
CLN8-214ENST00000637594 RPS6KA4O75676 772 aa12.1□□□□□ -0.47
CLN8-214ENST00000637594 MMP10P09238 476 aa12.1□□□□□ -0.47
CLN8-214ENST00000637594 TNNT2P45379 298 aaPredicted RBP12.1□□□□□ -0.47
CLN8-214ENST00000637594 ARHGEF1Q92888 912 aaKnown RBP12.1□□□□□ -0.47
CLN8-214ENST00000637594 GPBP1L1Q9HC44 474 aaPredicted RBP12.1□□□□□ -0.47
CLN8-214ENST00000637594 CNTNAP4Q9C0A0 1308 aa12.1□□□□□ -0.47
CLN8-214ENST00000637594 ZNF831Q5JPB2 1677 aa12.09□□□□□ -0.47
CLN8-214ENST00000637594 HSPA5P11021 654 aaKnown RBP12.08□□□□□ -0.48
CLN8-214ENST00000637594 GYS1P13807 737 aa12.07□□□□□ -0.48
CLN8-214ENST00000637594 MTHFSP49914 203 aa12.07□□□□□ -0.48
CLN8-214ENST00000637594 CABP4P57796 275 aa12.07□□□□□ -0.48
CLN8-214ENST00000637594 RBM42Q9BTD8 480 aaKnown RBP12.07□□□□□ -0.48
CLN8-214ENST00000637594 HSPA6P17066 643 aa12.06□□□□□ -0.48
CLN8-214ENST00000637594 IL13P35225 146 aa12.06□□□□□ -0.48
CLN8-214ENST00000637594 RFC4P35249 363 aa12.06□□□□□ -0.48
CLN8-214ENST00000637594 ZNF530Q6P9A1 599 aaPredicted RBP12.06□□□□□ -0.48
CLN8-214ENST00000637594 MORC1Q86VD1 984 aa12.06□□□□□ -0.48
CLN8-214ENST00000637594 NFATC2IPQ8NCF5 419 aa12.06□□□□□ -0.48
CLN8-214ENST00000637594 KDM6AO15550 1401 aaPredicted RBP12.05□□□□□ -0.48
CLN8-214ENST00000637594 A0A0G2JLW4 131 aa12.05□□□□□ -0.48
CLN8-214ENST00000637594 KIF3CO14782 793 aa12.05□□□□□ -0.48
CLN8-214ENST00000637594 KCNA3P22001 575 aa12.05□□□□□ -0.48
CLN8-214ENST00000637594 C1orf141Q5JVX7 400 aa12.05□□□□□ -0.48
CLN8-214ENST00000637594 POLR3GLQ9BT43 218 aa12.05□□□□□ -0.48
CLN8-214ENST00000637594 PCGF6Q9BYE7 350 aa12.05□□□□□ -0.48
CLN8-214ENST00000637594 CCDC87Q9NVE4 849 aa12.05□□□□□ -0.48
CLN8-214ENST00000637594 PXDNLA1KZ92 1463 aa12.04□□□□□ -0.48
CLN8-214ENST00000637594 SULT6B1Q6IMI4 303 aa12.04□□□□□ -0.48
CLN8-214ENST00000637594 AEBP1Q8IUX7 1158 aa12.04□□□□□ -0.48
CLN8-214ENST00000637594 KNSTRNQ9Y448 316 aa12.04□□□□□ -0.48
CLN8-214ENST00000637594 PARP3Q9Y6F1 533 aa12.04□□□□□ -0.48
CLN8-214ENST00000637594 KIF13BQ9NQT8 1826 aa12.04□□□□□ -0.48
CLN8-214ENST00000637594 C10orf71Q711Q0 1435 aa12.03□□□□□ -0.48
CLN8-214ENST00000637594 DPEP1P16444 411 aa12.03□□□□□ -0.48
CLN8-214ENST00000637594 CRKLP46109 303 aaKnown RBP12.03□□□□□ -0.48
CLN8-214ENST00000637594 AKAP4Q5JQC9 854 aa12.03□□□□□ -0.48
CLN8-214ENST00000637594 CICQ96RK0 1608 aaPredicted RBP12.03□□□□□ -0.48
CLN8-214ENST00000637594 PTCD1O75127 700 aaKnown RBP12.02□□□□□ -0.49
CLN8-214ENST00000637594 TM4SF1P30408 202 aa12.02□□□□□ -0.49
CLN8-214ENST00000637594 AMER1Q5JTC6 1135 aaPredicted RBP12.02□□□□□ -0.49
CLN8-214ENST00000637594 INTS5Q6P9B9 1019 aaKnown RBP12.02□□□□□ -0.49
CLN8-214ENST00000637594 ZNF526Q8TF50 670 aaPredicted RBP12.02□□□□□ -0.49
CLN8-214ENST00000637594 WWC3Q9ULE0 1092 aa12.02□□□□□ -0.49
CLN8-214ENST00000637594 BCS1LQ9Y276 419 aa12.02□□□□□ -0.49
CLN8-214ENST00000637594 IFFO2Q5TF58 517 aa12.01□□□□□ -0.49
CLN8-214ENST00000637594 ARHGAP27Q6ZUM4 889 aa12.01□□□□□ -0.49
CLN8-214ENST00000637594 PIM2Q9P1W9 311 aa12.01□□□□□ -0.49
CLN8-214ENST00000637594 USP42Q9H9J4 1324 aaKnown RBP12.01□□□□□ -0.49
CLN8-214ENST00000637594 PER1O15534 1290 aaPredicted RBP12□□□□□ -0.49
CLN8-214ENST00000637594 TOMM70O94826 608 aa12□□□□□ -0.49
CLN8-214ENST00000637594 FKBP8Q14318 412 aa12□□□□□ -0.49
CLN8-214ENST00000637594 SLC52A2Q9HAB3 445 aa12□□□□□ -0.49
CLN8-214ENST00000637594 CEP350Q5VT06 3117 aa12□□□□□ -0.49
CLN8-214ENST00000637594 COL5A3P25940 1745 aaPredicted RBP12□□□□□ -0.49
CLN8-214ENST00000637594 KIAA1551Q9HCM1 1747 aa12□□□□□ -0.49
CLN8-214ENST00000637594 FCHSD2O94868 740 aa11.99□□□□□ -0.49
CLN8-214ENST00000637594 LGR6Q9HBX8 967 aa11.99□□□□□ -0.49
CLN8-214ENST00000637594 MYH14Q7Z406 1995 aaKnown RBP11.99□□□□□ -0.49
CLN8-214ENST00000637594 C4AP0C0L4 1744 aa11.98□□□□□ -0.49
CLN8-214ENST00000637594 POLRMTO00411 1230 aaKnown RBP11.98□□□□□ -0.49
CLN8-214ENST00000637594 RNMTO43148 476 aaKnown RBP11.98□□□□□ -0.49
CLN8-214ENST00000637594 CYP19A1P11511 503 aaPredicted RBP11.98□□□□□ -0.49
CLN8-214ENST00000637594 DDR1Q08345 913 aa11.98□□□□□ -0.49
CLN8-214ENST00000637594 DALRD3Q5D0E6 543 aaKnown RBP11.98□□□□□ -0.49
CLN8-214ENST00000637594 VSIG10Q8N0Z9 540 aa11.98□□□□□ -0.49
CLN8-214ENST00000637594 SRP68Q9UHB9 627 aaKnown RBP11.98□□□□□ -0.49
CLN8-214ENST00000637594 ZPR1O75312 459 aa11.97□□□□□ -0.49
CLN8-214ENST00000637594 APLP1P51693 650 aa11.97□□□□□ -0.49
CLN8-214ENST00000637594 DNAJC5GQ8N7S2 189 aa11.97□□□□□ -0.49
CLN8-214ENST00000637594 SOS1Q07889 1333 aaPredicted RBP11.96□□□□□ -0.49
CLN8-214ENST00000637594 C9orf131Q5VYM1 1079 aa11.96□□□□□ -0.49
CLN8-214ENST00000637594 DNAJC10Q8IXB1 793 aa11.96□□□□□ -0.49
CLN8-214ENST00000637594 NARFQ9UHQ1 456 aa11.96□□□□□ -0.49
CLN8-214ENST00000637594 N4BP2Q86UW6 1770 aaPredicted RBP11.95□□□□□ -0.5
CLN8-214ENST00000637594 MTHFSDQ2M296 383 aaKnown RBP11.95□□□□□ -0.5
CLN8-214ENST00000637594 USPL1Q5W0Q7 1092 aa11.95□□□□□ -0.5
CLN8-214ENST00000637594 RBM46Q8TBY0 533 aaKnown RBP11.95□□□□□ -0.5
CLN8-214ENST00000637594 KIF7Q2M1P5 1343 aa11.94□□□□□ -0.5
CLN8-214ENST00000637594 DIAPH1O60610 1272 aaKnown RBP11.94□□□□□ -0.5
CLN8-214ENST00000637594 SLC39A6Q13433 755 aa11.94□□□□□ -0.5
CLN8-214ENST00000637594 CCER1Q8TC90 406 aaPredicted RBP11.94□□□□□ -0.5
CLN8-214ENST00000637594 NMRK2Q9NPI5 230 aa11.94□□□□□ -0.5
CLN8-214ENST00000637594 MRC1P22897 1456 aa11.94□□□□□ -0.5
CLN8-214ENST00000637594 ADAMTS7Q9UKP4 1686 aa11.94□□□□□ -0.5
CLN8-214ENST00000637594 BRCA1P38398 1863 aaKnown RBP11.93□□□□□ -0.5
CLN8-214ENST00000637594 SCN11AQ9UI33 1791 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms