RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 REC8O95072 547 aa6.78□□□□□ -1.32
CHD2-227ENST00000637572 EIF4A2Q14240 407 aaKnown RBP6.78□□□□□ -1.32
CHD2-227ENST00000637572 HSP90AB2PQ58FF8 381 aa6.78□□□□□ -1.32
CHD2-227ENST00000637572 DUSP27Q5VZP5 1158 aa6.78□□□□□ -1.32
CHD2-227ENST00000637572 CCDC82Q8N4S0 544 aa6.78□□□□□ -1.32
CHD2-227ENST00000637572 FAM117AQ9C073 453 aa6.78□□□□□ -1.32
CHD2-227ENST00000637572 HYPKQ9NX55 129 aa6.78□□□□□ -1.32
CHD2-227ENST00000637572 NOB1Q9ULX3 412 aaKnown RBP6.78□□□□□ -1.32
CHD2-227ENST00000637572 SETBP1Q9Y6X0 1596 aa6.77□□□□□ -1.33
CHD2-227ENST00000637572 AATKQ6ZMQ8 1374 aa6.77□□□□□ -1.33
CHD2-227ENST00000637572 LAMC1P11047 1609 aa6.77□□□□□ -1.33
CHD2-227ENST00000637572 AIMP1Q12904 312 aaKnown RBP6.77□□□□□ -1.33
CHD2-227ENST00000637572 MVPQ14764 893 aaKnown RBP6.77□□□□□ -1.33
CHD2-227ENST00000637572 RPAP2Q8IXW5 612 aaPredicted RBP6.77□□□□□ -1.33
CHD2-227ENST00000637572 DBF4Q9UBU7 674 aaPredicted RBP6.77□□□□□ -1.33
CHD2-227ENST00000637572 ZNF652Q9Y2D9 606 aa6.77□□□□□ -1.33
CHD2-227ENST00000637572 RBM6P78332 1123 aaKnown RBP6.77□□□□□ -1.33
CHD2-227ENST00000637572 EFCAB3Q8N7B9 438 aa6.77□□□□□ -1.33
CHD2-227ENST00000637572 CFAP65Q6ZU64 1925 aaKnown RBP6.77□□□□□ -1.33
CHD2-227ENST00000637572 TMEM94Q12767 1356 aa6.77□□□□□ -1.33
CHD2-227ENST00000637572 PTMSP20962 102 aa6.77□□□□□ -1.33
CHD2-227ENST00000637572 HOXC9P31274 260 aa6.77□□□□□ -1.33
CHD2-227ENST00000637572 PDAP1Q13442 181 aaKnown RBP6.77□□□□□ -1.33
CHD2-227ENST00000637572 LARP1Q6PKG0 1096 aaKnown RBP6.77□□□□□ -1.33
CHD2-227ENST00000637572 CLASRPQ8N2M8 674 aaKnown RBP6.77□□□□□ -1.33
CHD2-227ENST00000637572 ZCRB1Q8TBF4 217 aaKnown RBP6.77□□□□□ -1.33
CHD2-227ENST00000637572 AFF2P51816 1311 aa6.77□□□□□ -1.33
CHD2-227ENST00000637572 MAP3K19Q56UN5 1328 aa6.77□□□□□ -1.33
CHD2-227ENST00000637572 NEURL4Q96JN8 1562 aa6.76□□□□□ -1.33
CHD2-227ENST00000637572 PANK1Q8TE04 598 aa6.76□□□□□ -1.33
CHD2-227ENST00000637572 ARHGAP45Q92619 1136 aa6.76□□□□□ -1.33
CHD2-227ENST00000637572 MFRPQ9BY79 579 aa6.76□□□□□ -1.33
CHD2-227ENST00000637572 FANCIQ9NVI1 1328 aa6.76□□□□□ -1.33
CHD2-227ENST00000637572 ZNF526Q8TF50 670 aaPredicted RBP6.76□□□□□ -1.33
CHD2-227ENST00000637572 UPF1Q92900 1129 aaKnown RBP eCLIP6.76□□□□□ -1.33
CHD2-227ENST00000637572 SMARCC1Q92922 1105 aaPredicted RBP6.76□□□□□ -1.33
CHD2-227ENST00000637572 AK7Q96M32 723 aa6.76□□□□□ -1.33
CHD2-227ENST00000637572 REREQ9P2R6 1566 aa6.76□□□□□ -1.33
CHD2-227ENST00000637572 IL2RBP14784 551 aa6.76□□□□□ -1.33
CHD2-227ENST00000637572 PSEN1P49768 467 aa6.76□□□□□ -1.33
CHD2-227ENST00000637572 MCM10Q7L590 875 aa6.76□□□□□ -1.33
CHD2-227ENST00000637572 ZNF467Q7Z7K2 595 aaPredicted RBP6.76□□□□□ -1.33
CHD2-227ENST00000637572 KCTD17Q8N5Z5 321 aa6.76□□□□□ -1.33
CHD2-227ENST00000637572 TRPC5Q9UL62 973 aaPredicted RBP6.76□□□□□ -1.33
CHD2-227ENST00000637572 KIF3AQ9Y496 699 aa6.76□□□□□ -1.33
CHD2-227ENST00000637572 E9PCH4 1651 aa6.76□□□□□ -1.33
CHD2-227ENST00000637572 GRXCR2A6NFK2 248 aa6.76□□□□□ -1.33
CHD2-227ENST00000637572 RARSP54136 660 aaKnown RBP6.76□□□□□ -1.33
CHD2-227ENST00000637572 DIAPH3Q9NSV4 1193 aa6.76□□□□□ -1.33
CHD2-227ENST00000637572 ROBO2Q9HCK4 1378 aa6.75□□□□□ -1.33
CHD2-227ENST00000637572 ST18O60284 1047 aa6.75□□□□□ -1.33
CHD2-227ENST00000637572 NOL10Q9BSC4 688 aaKnown RBP6.75□□□□□ -1.33
CHD2-227ENST00000637572 RTL1A6NKG5 1358 aa6.75□□□□□ -1.33
CHD2-227ENST00000637572 PLEKHH1Q9ULM0 1364 aa6.75□□□□□ -1.33
CHD2-227ENST00000637572 HIP1O00291 1037 aa6.75□□□□□ -1.33
CHD2-227ENST00000637572 PPRC1Q5VV67 1664 aaKnown RBP6.75□□□□□ -1.33
CHD2-227ENST00000637572 SNRPA1P09661 255 aaKnown RBP6.75□□□□□ -1.33
CHD2-227ENST00000637572 MFAP1P55081 439 aaKnown RBP6.75□□□□□ -1.33
CHD2-227ENST00000637572 DCAF5Q96JK2 942 aa6.75□□□□□ -1.33
CHD2-227ENST00000637572 ORAI2Q96SN7 254 aa6.75□□□□□ -1.33
CHD2-227ENST00000637572 A0A087WZG4 1122 aa6.74□□□□□ -1.33
CHD2-227ENST00000637572 TESPA1A2RU30 521 aaPredicted RBP6.74□□□□□ -1.33
CHD2-227ENST00000637572 RAD21O60216 631 aa6.74□□□□□ -1.33
CHD2-227ENST00000637572 AMOTL1Q8IY63 956 aa6.74□□□□□ -1.33
CHD2-227ENST00000637572 PCDH11XQ9BZA7 1347 aa6.74□□□□□ -1.33
CHD2-227ENST00000637572 PCDH11YQ9BZA8 1340 aa6.74□□□□□ -1.33
CHD2-227ENST00000637572 R3HDM1Q15032 1099 aaKnown RBP6.74□□□□□ -1.33
CHD2-227ENST00000637572 ZRSR1Q15695 479 aaKnown RBP6.74□□□□□ -1.33
CHD2-227ENST00000637572 INTS3Q68E01 1043 aaKnown RBP6.74□□□□□ -1.33
CHD2-227ENST00000637572 VPS37DQ86XT2 251 aa6.74□□□□□ -1.33
CHD2-227ENST00000637572 USHBP1Q8N6Y0 703 aa6.74□□□□□ -1.33
CHD2-227ENST00000637572 MAP3K5Q99683 1374 aa6.74□□□□□ -1.33
CHD2-227ENST00000637572 DLC1Q96QB1 1528 aa6.74□□□□□ -1.33
CHD2-227ENST00000637572 BCAR3O75815 825 aa6.74□□□□□ -1.33
CHD2-227ENST00000637572 PDE4DQ08499 809 aa6.74□□□□□ -1.33
CHD2-227ENST00000637572 RNF20Q5VTR2 975 aa6.74□□□□□ -1.33
CHD2-227ENST00000637572 MPRIPQ6WCQ1 1025 aa6.74□□□□□ -1.33
CHD2-227ENST00000637572 DEFB132Q7Z7B7 95 aa6.74□□□□□ -1.33
CHD2-227ENST00000637572 ALKQ9UM73 1620 aa6.74□□□□□ -1.33
CHD2-227ENST00000637572 PTCH1Q13635 1447 aa6.74□□□□□ -1.33
CHD2-227ENST00000637572 CEP152O94986 1710 aa6.74□□□□□ -1.33
CHD2-227ENST00000637572 HOXB7P09629 217 aa6.74□□□□□ -1.33
CHD2-227ENST00000637572 IL13P35225 146 aa6.74□□□□□ -1.33
CHD2-227ENST00000637572 CHRNA2Q15822 529 aa6.74□□□□□ -1.33
CHD2-227ENST00000637572 EYA1Q99502 592 aa6.74□□□□□ -1.33
CHD2-227ENST00000637572 SURF6O75683 361 aaKnown RBP6.73□□□□□ -1.33
CHD2-227ENST00000637572 ZKSCAN1P17029 563 aaPredicted RBP6.73□□□□□ -1.33
CHD2-227ENST00000637572 C16orf71Q8IYS4 520 aaPredicted RBP6.73□□□□□ -1.33
CHD2-227ENST00000637572 ANO8Q9HCE9 1232 aaPredicted RBP6.73□□□□□ -1.33
CHD2-227ENST00000637572 TRPM1Q7Z4N2 1603 aa6.73□□□□□ -1.33
CHD2-227ENST00000637572 VWDEQ8N2E2 1590 aa6.73□□□□□ -1.33
CHD2-227ENST00000637572 USP6P35125 1406 aa6.73□□□□□ -1.33
CHD2-227ENST00000637572 ADGRL3Q9HAR2 1447 aa6.73□□□□□ -1.33
CHD2-227ENST00000637572 ZMYND10O75800 440 aa6.73□□□□□ -1.33
CHD2-227ENST00000637572 DDB1Q16531 1140 aa6.73□□□□□ -1.33
CHD2-227ENST00000637572 SSH1Q8WYL5 1049 aa6.73□□□□□ -1.33
CHD2-227ENST00000637572 RILPL2Q969X0 211 aa6.73□□□□□ -1.33
CHD2-227ENST00000637572 NOP58Q9Y2X3 529 aaKnown RBP6.73□□□□□ -1.33
CHD2-227ENST00000637572 CLTCQ00610 1675 aaKnown RBP6.73□□□□□ -1.33
CHD2-227ENST00000637572 DDX27Q96GQ7 796 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms