RNA–Protein interactions for RNA: ENST00000637555.1

CNTNAP2-220, Transcript of contactin associated protein like 2, humanhuman

TSL 5

Gene CNTNAP2, Length 2,341 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP2-220ENST00000637555 IPO9Q96P70 1041 aaKnown RBP16.44■□□□□ 0.22
CNTNAP2-220ENST00000637555 TRPC5Q9UL62 973 aaPredicted RBP16.44■□□□□ 0.22
CNTNAP2-220ENST00000637555 TCERG1O14776 1098 aaKnown RBP16.43■□□□□ 0.22
CNTNAP2-220ENST00000637555 MPRIPQ6WCQ1 1025 aa16.43■□□□□ 0.22
CNTNAP2-220ENST00000637555 GJD4Q96KN9 370 aaPredicted RBP16.43■□□□□ 0.22
CNTNAP2-220ENST00000637555 IFT57Q9NWB7 429 aa16.43■□□□□ 0.22
CNTNAP2-220ENST00000637555 PDE4AP27815 886 aa16.42■□□□□ 0.22
CNTNAP2-220ENST00000637555 NKX1-1Q15270 411 aaPredicted RBP16.42■□□□□ 0.22
CNTNAP2-220ENST00000637555 FAM98CQ17RN3 349 aaKnown RBP16.42■□□□□ 0.22
CNTNAP2-220ENST00000637555 ANP32AP39687 249 aaKnown RBP16.41■□□□□ 0.22
CNTNAP2-220ENST00000637555 UBR2Q8IWV8 1755 aa16.41■□□□□ 0.22
CNTNAP2-220ENST00000637555 CFAP44Q96MT7 982 aa16.41■□□□□ 0.22
CNTNAP2-220ENST00000637555 SBF2Q86WG5 1849 aa16.41■□□□□ 0.22
CNTNAP2-220ENST00000637555 GNAI1P63096 354 aa16.4■□□□□ 0.22
CNTNAP2-220ENST00000637555 NPM2Q86SE8 214 aaKnown RBP16.4■□□□□ 0.22
CNTNAP2-220ENST00000637555 TSR2Q969E8 191 aaKnown RBP16.4■□□□□ 0.22
CNTNAP2-220ENST00000637555 QTRT2Q9H974 415 aaKnown RBP16.4■□□□□ 0.22
CNTNAP2-220ENST00000637555 EXOC5O00471 708 aa16.4■□□□□ 0.22
CNTNAP2-220ENST00000637555 CHL1O00533 1208 aa16.4■□□□□ 0.22
CNTNAP2-220ENST00000637555 HSP90AB1P08238 724 aaKnown RBP16.4■□□□□ 0.22
CNTNAP2-220ENST00000637555 DCAF5Q96JK2 942 aa16.4■□□□□ 0.22
CNTNAP2-220ENST00000637555 BACH2Q9BYV9 841 aa16.4■□□□□ 0.22
CNTNAP2-220ENST00000637555 MYH16Q9H6N6 1097 aa16.4■□□□□ 0.22
CNTNAP2-220ENST00000637555 ONECUT3O60422 494 aaPredicted RBP16.39■□□□□ 0.21
CNTNAP2-220ENST00000637555 DDB1Q16531 1140 aa16.39■□□□□ 0.21
CNTNAP2-220ENST00000637555 DDX54Q8TDD1 881 aaKnown RBP16.39■□□□□ 0.21
CNTNAP2-220ENST00000637555 MBIPQ9NS73 344 aa16.39■□□□□ 0.21
CNTNAP2-220ENST00000637555 ZNF772Q68DY9 489 aaPredicted RBP16.38■□□□□ 0.21
CNTNAP2-220ENST00000637555 LAS1LQ9Y4W2 734 aaKnown RBP16.37■□□□□ 0.21
CNTNAP2-220ENST00000637555 TAF7Q15545 349 aaPredicted RBP16.37■□□□□ 0.21
CNTNAP2-220ENST00000637555 BCAR3O75815 825 aa16.36■□□□□ 0.21
CNTNAP2-220ENST00000637555 NBR1Q14596 966 aa16.36■□□□□ 0.21
CNTNAP2-220ENST00000637555 BABAM1Q9NWV8 329 aa16.36■□□□□ 0.21
CNTNAP2-220ENST00000637555 RGS17Q9UGC6 210 aaPredicted RBP16.36■□□□□ 0.21
CNTNAP2-220ENST00000637555 KDM2BQ8NHM5 1336 aa16.36■□□□□ 0.21
CNTNAP2-220ENST00000637555 C5P01031 1676 aa16.36■□□□□ 0.21
CNTNAP2-220ENST00000637555 NHSQ6T4R5 1651 aa16.36■□□□□ 0.21
CNTNAP2-220ENST00000637555 MARCH10Q8NA82 808 aaPredicted RBP16.36■□□□□ 0.21
CNTNAP2-220ENST00000637555 SLC52A2Q9HAB3 445 aa16.36■□□□□ 0.21
CNTNAP2-220ENST00000637555 MS4A1P11836 297 aa16.35■□□□□ 0.21
CNTNAP2-220ENST00000637555 TEFQ10587 303 aa16.35■□□□□ 0.21
CNTNAP2-220ENST00000637555 MIS18AQ9NYP9 233 aa16.35■□□□□ 0.21
CNTNAP2-220ENST00000637555 ERVV-2B6SEH9 535 aa16.34■□□□□ 0.21
CNTNAP2-220ENST00000637555 EXOSC9Q06265 439 aaKnown RBP16.34■□□□□ 0.21
CNTNAP2-220ENST00000637555 ZBTB47Q9UFB7 747 aaPredicted RBP16.34■□□□□ 0.21
CNTNAP2-220ENST00000637555 ILDR1Q86SU0 546 aaPredicted RBP16.34■□□□□ 0.21
CNTNAP2-220ENST00000637555 TSPYL4Q9UJ04 414 aa16.34■□□□□ 0.21
CNTNAP2-220ENST00000637555 LAMB4A4D0S4 1761 aa16.34■□□□□ 0.21
CNTNAP2-220ENST00000637555 KAT6BQ8WYB5 2073 aa16.33■□□□□ 0.21
CNTNAP2-220ENST00000637555 RBM6P78332 1123 aaKnown RBP16.32■□□□□ 0.2
CNTNAP2-220ENST00000637555 NFATC2IPQ8NCF5 419 aa16.32■□□□□ 0.2
CNTNAP2-220ENST00000637555 KCPQ6ZWJ8 1503 aa16.32■□□□□ 0.2
CNTNAP2-220ENST00000637555 BCL9O00512 1426 aa16.31■□□□□ 0.2
CNTNAP2-220ENST00000637555 SEPT12Q8IYM1 358 aa16.31■□□□□ 0.2
CNTNAP2-220ENST00000637555 CACNA1FO60840 1977 aa16.31■□□□□ 0.2
CNTNAP2-220ENST00000637555 BTAF1O14981 1849 aa16.31■□□□□ 0.2
CNTNAP2-220ENST00000637555 BTBD11A6QL63 1104 aa16.31■□□□□ 0.2
CNTNAP2-220ENST00000637555 CABP4P57796 275 aa16.31■□□□□ 0.2
CNTNAP2-220ENST00000637555 KCNQ3O43525 872 aa16.3■□□□□ 0.2
CNTNAP2-220ENST00000637555 C8orf58Q8NAV2 365 aa16.3■□□□□ 0.2
CNTNAP2-220ENST00000637555 KRT24Q2M2I5 525 aa16.3■□□□□ 0.2
CNTNAP2-220ENST00000637555 TSPYL6Q8N831 410 aa16.3■□□□□ 0.2
CNTNAP2-220ENST00000637555 HEG1Q9ULI3 1381 aa16.3■□□□□ 0.2
CNTNAP2-220ENST00000637555 A0A0G2JS52 829 aa16.29■□□□□ 0.2
CNTNAP2-220ENST00000637555 CT47B1P0C2W7 299 aaPredicted RBP16.29■□□□□ 0.2
CNTNAP2-220ENST00000637555 POTEAQ6S8J7 498 aa16.29■□□□□ 0.2
CNTNAP2-220ENST00000637555 RGS12O14924 1447 aa16.29■□□□□ 0.2
CNTNAP2-220ENST00000637555 CICQ96RK0 1608 aaPredicted RBP16.29■□□□□ 0.2
CNTNAP2-220ENST00000637555 EIF4A1P60842 406 aaKnown RBP16.28■□□□□ 0.2
CNTNAP2-220ENST00000637555 TJP1Q07157 1748 aa16.28■□□□□ 0.2
CNTNAP2-220ENST00000637555 VAMP4O75379 141 aa16.27■□□□□ 0.2
CNTNAP2-220ENST00000637555 SLC39A6Q13433 755 aa16.27■□□□□ 0.2
CNTNAP2-220ENST00000637555 ZNF790Q6PG37 636 aa16.27■□□□□ 0.2
CNTNAP2-220ENST00000637555 CENPQQ7L2Z9 268 aaPredicted RBP16.27■□□□□ 0.2
CNTNAP2-220ENST00000637555 ZNF831Q5JPB2 1677 aa16.27■□□□□ 0.19
CNTNAP2-220ENST00000637555 TWISTNBQ3B726 338 aaPredicted RBP16.27■□□□□ 0.19
CNTNAP2-220ENST00000637555 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.27■□□□□ 0.19
CNTNAP2-220ENST00000637555 PIGBQ92521 554 aa16.27■□□□□ 0.19
CNTNAP2-220ENST00000637555 TMOD3Q9NYL9 352 aa16.27■□□□□ 0.19
CNTNAP2-220ENST00000637555 LY75O60449 1722 aa16.26■□□□□ 0.19
CNTNAP2-220ENST00000637555 RXRBP28702 533 aa16.25■□□□□ 0.19
CNTNAP2-220ENST00000637555 RARSP54136 660 aaKnown RBP16.25■□□□□ 0.19
CNTNAP2-220ENST00000637555 PRIM1P49642 420 aaKnown RBP16.25■□□□□ 0.19
CNTNAP2-220ENST00000637555 ELL2O00472 640 aaPredicted RBP16.24■□□□□ 0.19
CNTNAP2-220ENST00000637555 SOS1Q07889 1333 aaPredicted RBP16.24■□□□□ 0.19
CNTNAP2-220ENST00000637555 FAM182BQ5T319 152 aa16.24■□□□□ 0.19
CNTNAP2-220ENST00000637555 ACSBG1Q96GR2 724 aa16.24■□□□□ 0.19
CNTNAP2-220ENST00000637555 IGHDP01880 384 aa16.23■□□□□ 0.19
CNTNAP2-220ENST00000637555 DEKP35659 375 aaKnown RBP16.23■□□□□ 0.19
CNTNAP2-220ENST00000637555 ZNF428Q96B54 188 aa16.23■□□□□ 0.19
CNTNAP2-220ENST00000637555 COL5A3P25940 1745 aaPredicted RBP16.23■□□□□ 0.19
CNTNAP2-220ENST00000637555 PANK1Q8TE04 598 aa16.23■□□□□ 0.19
CNTNAP2-220ENST00000637555 ZNF496Q96IT1 587 aaPredicted RBP16.23■□□□□ 0.19
CNTNAP2-220ENST00000637555 BCL11AQ9H165 835 aa16.23■□□□□ 0.19
CNTNAP2-220ENST00000637555 ATG3Q9NT62 314 aa16.23■□□□□ 0.19
CNTNAP2-220ENST00000637555 KRT27Q7Z3Y8 459 aa16.22■□□□□ 0.19
CNTNAP2-220ENST00000637555 TNS1Q9HBL0 1735 aaKnown RBP16.22■□□□□ 0.19
CNTNAP2-220ENST00000637555 KCNQ2O43526 872 aa16.22■□□□□ 0.19
CNTNAP2-220ENST00000637555 HOXB7P09629 217 aa16.22■□□□□ 0.19
CNTNAP2-220ENST00000637555 RGS3P49796 1198 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms