RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 STRN4Q9NRL3 753 aa27.42■■□□□ 1.98
CHRNA7-228ENST00000637519 PDZRN3Q9UPQ7 1066 aa27.41■■□□□ 1.98
CHRNA7-228ENST00000637519 SPG7Q9UQ90 795 aa27.4■■□□□ 1.98
CHRNA7-228ENST00000637519 OVOS2A0A0G2JMS6 1433 aa27.4■■□□□ 1.98
CHRNA7-228ENST00000637519 EIF2S2P20042 333 aaKnown RBP27.4■■□□□ 1.98
CHRNA7-228ENST00000637519 HDAC1Q13547 482 aaPredicted RBP27.4■■□□□ 1.98
CHRNA7-228ENST00000637519 HDGFL1Q5TGJ6 251 aa27.4■■□□□ 1.98
CHRNA7-228ENST00000637519 ADAMTS7Q9UKP4 1686 aa27.39■■□□□ 1.98
CHRNA7-228ENST00000637519 CYP27B1O15528 508 aa27.39■■□□□ 1.97
CHRNA7-228ENST00000637519 INTS3Q68E01 1043 aaKnown RBP27.39■■□□□ 1.97
CHRNA7-228ENST00000637519 FLIIQ13045 1269 aa27.37■■□□□ 1.97
CHRNA7-228ENST00000637519 LARP1Q6PKG0 1096 aaKnown RBP27.37■■□□□ 1.97
CHRNA7-228ENST00000637519 SLC4A10Q6U841 1118 aa27.37■■□□□ 1.97
CHRNA7-228ENST00000637519 BACH2Q9BYV9 841 aa27.37■■□□□ 1.97
CHRNA7-228ENST00000637519 SIPA1L3O60292 1781 aaPredicted RBP27.37■■□□□ 1.97
CHRNA7-228ENST00000637519 PKD1L3Q7Z443 1732 aa27.36■■□□□ 1.97
CHRNA7-228ENST00000637519 PRAMEF22A3QJZ6 481 aa27.35■■□□□ 1.97
CHRNA7-228ENST00000637519 FKBP5Q13451 457 aaPredicted RBP27.35■■□□□ 1.97
CHRNA7-228ENST00000637519 IFNL2Q8IZJ0 200 aa27.35■■□□□ 1.97
CHRNA7-228ENST00000637519 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.35■■□□□ 1.97
CHRNA7-228ENST00000637519 PHAXQ9H814 394 aaKnown RBP27.34■■□□□ 1.97
CHRNA7-228ENST00000637519 SLC39A6Q13433 755 aa27.34■■□□□ 1.97
CHRNA7-228ENST00000637519 AHDC1Q5TGY3 1603 aaPredicted RBP27.34■■□□□ 1.97
CHRNA7-228ENST00000637519 SOS1Q07889 1333 aaPredicted RBP27.33■■□□□ 1.97
CHRNA7-228ENST00000637519 SCN11AQ9UI33 1791 aa27.33■■□□□ 1.97
CHRNA7-228ENST00000637519 SIRT2Q8IXJ6 389 aa27.33■■□□□ 1.97
CHRNA7-228ENST00000637519 ANXA1P04083 346 aa27.32■■□□□ 1.96
CHRNA7-228ENST00000637519 MEIS3Q99687 375 aa27.32■■□□□ 1.96
CHRNA7-228ENST00000637519 SLC52A2Q9HAB3 445 aa27.32■■□□□ 1.96
CHRNA7-228ENST00000637519 CHPF2Q9P2E5 772 aa27.32■■□□□ 1.96
CHRNA7-228ENST00000637519 EVA1CP58658 441 aa27.32■■□□□ 1.96
CHRNA7-228ENST00000637519 NFATC2IPQ8NCF5 419 aa27.32■■□□□ 1.96
CHRNA7-228ENST00000637519 USP35Q9P2H5 1018 aa27.32■■□□□ 1.96
CHRNA7-228ENST00000637519 CHMP4BQ9H444 224 aaKnown RBP27.31■■□□□ 1.96
CHRNA7-228ENST00000637519 SMC5Q8IY18 1101 aa27.3■■□□□ 1.96
CHRNA7-228ENST00000637519 PARP4Q9UKK3 1724 aaKnown RBP27.3■■□□□ 1.96
CHRNA7-228ENST00000637519 BTG4Q9NY30 223 aa27.29■■□□□ 1.96
CHRNA7-228ENST00000637519 C8orf34Q49A92 452 aa27.29■■□□□ 1.96
CHRNA7-228ENST00000637519 CARD10Q9BWT7 1032 aa27.29■■□□□ 1.96
CHRNA7-228ENST00000637519 GIGYF1O75420 1035 aaPredicted RBP27.28■■□□□ 1.96
CHRNA7-228ENST00000637519 HOXB7P09629 217 aa27.28■■□□□ 1.96
CHRNA7-228ENST00000637519 DCAF5Q96JK2 942 aa27.27■■□□□ 1.96
CHRNA7-228ENST00000637519 PIP4K2BP78356 416 aa27.26■■□□□ 1.95
CHRNA7-228ENST00000637519 ATP10DQ9P241 1426 aa27.26■■□□□ 1.95
CHRNA7-228ENST00000637519 HEG1Q9ULI3 1381 aa27.26■■□□□ 1.95
CHRNA7-228ENST00000637519 FAM161AQ3B820 660 aa27.26■■□□□ 1.95
CHRNA7-228ENST00000637519 ZNF790Q6PG37 636 aa27.26■■□□□ 1.95
CHRNA7-228ENST00000637519 ZCRB1Q8TBF4 217 aaKnown RBP27.26■■□□□ 1.95
CHRNA7-228ENST00000637519 IL2RBP14784 551 aa27.25■■□□□ 1.95
CHRNA7-228ENST00000637519 MRC1P22897 1456 aa27.25■■□□□ 1.95
CHRNA7-228ENST00000637519 PLEKHG2Q9H7P9 1386 aa27.25■■□□□ 1.95
CHRNA7-228ENST00000637519 PROSER3Q2NL68 480 aa27.25■■□□□ 1.95
CHRNA7-228ENST00000637519 COL16A1Q07092 1604 aaPredicted RBP27.24■■□□□ 1.95
CHRNA7-228ENST00000637519 CCT4P50991 539 aaKnown RBP27.24■■□□□ 1.95
CHRNA7-228ENST00000637519 NPM2Q86SE8 214 aaKnown RBP27.24■■□□□ 1.95
CHRNA7-228ENST00000637519 PCDH11XQ9BZA7 1347 aa27.23■■□□□ 1.95
CHRNA7-228ENST00000637519 PCDH11YQ9BZA8 1340 aa27.23■■□□□ 1.95
CHRNA7-228ENST00000637519 DDX54Q8TDD1 881 aaKnown RBP27.23■■□□□ 1.95
CHRNA7-228ENST00000637519 COL22A1Q8NFW1 1626 aaPredicted RBP27.22■■□□□ 1.95
CHRNA7-228ENST00000637519 LNPKQ9C0E8 428 aa27.22■■□□□ 1.95
CHRNA7-228ENST00000637519 PHLPP1O60346 1717 aa27.22■■□□□ 1.95
CHRNA7-228ENST00000637519 C5P01031 1676 aa27.21■■□□□ 1.95
CHRNA7-228ENST00000637519 CACNA1FO60840 1977 aa27.21■■□□□ 1.95
CHRNA7-228ENST00000637519 SHANK3Q9BYB0 1731 aa27.21■■□□□ 1.95
CHRNA7-228ENST00000637519 CABP4P57796 275 aa27.21■■□□□ 1.95
CHRNA7-228ENST00000637519 HSP90AB1P08238 724 aaKnown RBP27.2■■□□□ 1.95
CHRNA7-228ENST00000637519 NUCB1Q02818 461 aa27.2■■□□□ 1.95
CHRNA7-228ENST00000637519 CEP85Q6P2H3 762 aa27.2■■□□□ 1.95
CHRNA7-228ENST00000637519 ZNF496Q96IT1 587 aaPredicted RBP27.2■■□□□ 1.95
CHRNA7-228ENST00000637519 COL14A1Q05707 1796 aaKnown RBP27.18■■□□□ 1.94
CHRNA7-228ENST00000637519 ADAMTS2O95450 1211 aa27.18■■□□□ 1.94
CHRNA7-228ENST00000637519 ANKRD44Q8N8A2 993 aa27.18■■□□□ 1.94
CHRNA7-228ENST00000637519 DBF4Q9UBU7 674 aaPredicted RBP27.18■■□□□ 1.94
CHRNA7-228ENST00000637519 ANKRD45Q5TZF3 282 aa27.17■■□□□ 1.94
CHRNA7-228ENST00000637519 CHD1LQ86WJ1 897 aa27.17■■□□□ 1.94
CHRNA7-228ENST00000637519 PI4KAP2A4QPH2 592 aa27.16■■□□□ 1.94
CHRNA7-228ENST00000637519 MSH5O43196 834 aa27.16■■□□□ 1.94
CHRNA7-228ENST00000637519 TTC5Q8N0Z6 440 aa27.16■■□□□ 1.94
CHRNA7-228ENST00000637519 PI4KAP1Q8N8J0 262 aa27.16■■□□□ 1.94
CHRNA7-228ENST00000637519 PXDNLA1KZ92 1463 aa27.16■■□□□ 1.94
CHRNA7-228ENST00000637519 GCC1Q96CN9 775 aa27.15■■□□□ 1.94
CHRNA7-228ENST00000637519 ADCY9O60503 1353 aa27.15■■□□□ 1.94
CHRNA7-228ENST00000637519 BCL11AQ9H165 835 aa27.15■■□□□ 1.94
CHRNA7-228ENST00000637519 N4BP2Q86UW6 1770 aaPredicted RBP27.14■■□□□ 1.94
CHRNA7-228ENST00000637519 NUTM2BA6NNL0 878 aaPredicted RBP27.13■■□□□ 1.93
CHRNA7-228ENST00000637519 NUTM2EB1AL46 878 aaPredicted RBP27.13■■□□□ 1.93
CHRNA7-228ENST00000637519 PIP4K2AP48426 406 aaPredicted RBP27.13■■□□□ 1.93
CHRNA7-228ENST00000637519 NUTM2AQ8IVF1 878 aaPredicted RBP27.13■■□□□ 1.93
CHRNA7-228ENST00000637519 ANP32AP39687 249 aaKnown RBP27.12■■□□□ 1.93
CHRNA7-228ENST00000637519 PDIA6Q15084 440 aa27.12■■□□□ 1.93
CHRNA7-228ENST00000637519 RPAP2Q8IXW5 612 aaPredicted RBP27.12■■□□□ 1.93
CHRNA7-228ENST00000637519 DNAAF4Q8WXU2 420 aa27.12■■□□□ 1.93
CHRNA7-228ENST00000637519 TOM1O60784 492 aa27.12■■□□□ 1.93
CHRNA7-228ENST00000637519 CHMP4AQ9BY43 222 aa27.11■■□□□ 1.93
CHRNA7-228ENST00000637519 USP44Q9H0E7 712 aa27.11■■□□□ 1.93
CHRNA7-228ENST00000637519 USP16Q9Y5T5 823 aa27.11■■□□□ 1.93
CHRNA7-228ENST00000637519 GLI3P10071 1580 aa27.11■■□□□ 1.93
CHRNA7-228ENST00000637519 GNAI2P04899 355 aa27.1■■□□□ 1.93
CHRNA7-228ENST00000637519 AIMP1Q12904 312 aaKnown RBP27.1■■□□□ 1.93
CHRNA7-228ENST00000637519 MYL6BP14649 208 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms