RNA–Protein interactions for RNA: ENST00000637340.1

EFHC1-232, Transcript of EF-hand domain containing 1, humanhuman

TSL 1 (best)

Gene EFHC1, Length 4,004 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFHC1-232ENST00000637340 UVSSAQ2YD98 709 aa13.17□□□□□ -0.3
EFHC1-232ENST00000637340 CEP135Q66GS9 1140 aa13.17□□□□□ -0.3
EFHC1-232ENST00000637340 NME9Q86XW9 330 aa13.17□□□□□ -0.3
EFHC1-232ENST00000637340 STAC3Q96MF2 364 aa13.17□□□□□ -0.3
EFHC1-232ENST00000637340 ABCC2Q92887 1545 aa13.16□□□□□ -0.3
EFHC1-232ENST00000637340 PDRG1Q9NUG6 133 aa13.16□□□□□ -0.3
EFHC1-232ENST00000637340 SYCP2Q9BX26 1530 aa13.16□□□□□ -0.3
EFHC1-232ENST00000637340 SYNJ2O15056 1496 aa13.16□□□□□ -0.3
EFHC1-232ENST00000637340 RTEL1-TNFRSF6BF6WH68 1400 aa13.16□□□□□ -0.3
EFHC1-232ENST00000637340 SDF4Q9BRK5 362 aa13.16□□□□□ -0.3
EFHC1-232ENST00000637340 TRIM34Q9BYJ4 488 aa13.16□□□□□ -0.3
EFHC1-232ENST00000637340 A0A087WWV3 80 aa13.16□□□□□ -0.3
EFHC1-232ENST00000637340 STK11IPQ8N1F8 1099 aa13.16□□□□□ -0.3
EFHC1-232ENST00000637340 NPM1P06748 294 aaKnown RBP eCLIP13.15□□□□□ -0.3
EFHC1-232ENST00000637340 KRT222Q8N1A0 295 aa13.15□□□□□ -0.3
EFHC1-232ENST00000637340 LRRFIP2Q9Y608 721 aaKnown RBP13.15□□□□□ -0.3
EFHC1-232ENST00000637340 DISP1Q96F81 1524 aa13.15□□□□□ -0.3
EFHC1-232ENST00000637340 AK2P54819 239 aa13.15□□□□□ -0.3
EFHC1-232ENST00000637340 CREBRFQ8IUR6 639 aa13.15□□□□□ -0.3
EFHC1-232ENST00000637340 WAPLQ7Z5K2 1190 aa13.15□□□□□ -0.3
EFHC1-232ENST00000637340 TIGD1Q96MW7 591 aa13.15□□□□□ -0.3
EFHC1-232ENST00000637340 OGFRQ9NZT2 677 aa13.15□□□□□ -0.3
EFHC1-232ENST00000637340 IBTKQ9P2D0 1353 aaPredicted RBP13.14□□□□□ -0.31
EFHC1-232ENST00000637340 ELF2Q15723 593 aa13.14□□□□□ -0.31
EFHC1-232ENST00000637340 ERCC4Q92889 916 aaPredicted RBP13.14□□□□□ -0.31
EFHC1-232ENST00000637340 NPC1L1Q9UHC9 1359 aa13.14□□□□□ -0.31
EFHC1-232ENST00000637340 F13A1P00488 732 aa13.14□□□□□ -0.31
EFHC1-232ENST00000637340 NUP160Q12769 1436 aa13.14□□□□□ -0.31
EFHC1-232ENST00000637340 ISM2Q6H9L7 571 aa13.14□□□□□ -0.31
EFHC1-232ENST00000637340 G2E3Q7L622 706 aa13.14□□□□□ -0.31
EFHC1-232ENST00000637340 LIMCH1Q9UPQ0 1083 aa13.14□□□□□ -0.31
EFHC1-232ENST00000637340 CYP46A1Q9Y6A2 500 aa13.14□□□□□ -0.31
EFHC1-232ENST00000637340 GUCY1B3Q02153 619 aa13.14□□□□□ -0.31
EFHC1-232ENST00000637340 TYRO3Q06418 890 aa13.14□□□□□ -0.31
EFHC1-232ENST00000637340 TEX35Q5T0J7 233 aa13.14□□□□□ -0.31
EFHC1-232ENST00000637340 UTP14CQ5TAP6 766 aaKnown RBP13.14□□□□□ -0.31
EFHC1-232ENST00000637340 IFIT2P09913 472 aaKnown RBP13.13□□□□□ -0.31
EFHC1-232ENST00000637340 SRGAP3O43295 1099 aa13.13□□□□□ -0.31
EFHC1-232ENST00000637340 TTLL5Q6EMB2 1281 aa13.13□□□□□ -0.31
EFHC1-232ENST00000637340 ITSN2Q9NZM3 1697 aa13.13□□□□□ -0.31
EFHC1-232ENST00000637340 CEP170Q5SW79 1584 aa13.12□□□□□ -0.31
EFHC1-232ENST00000637340 NUTM2GQ5VZR2 741 aa13.12□□□□□ -0.31
EFHC1-232ENST00000637340 CCDC73Q6ZRK6 1079 aa13.12□□□□□ -0.31
EFHC1-232ENST00000637340 CNTROBQ8N137 903 aa13.12□□□□□ -0.31
EFHC1-232ENST00000637340 TRPM1Q7Z4N2 1603 aa13.12□□□□□ -0.31
EFHC1-232ENST00000637340 SKILP12757 684 aa13.12□□□□□ -0.31
EFHC1-232ENST00000637340 CHMLP26374 656 aa13.12□□□□□ -0.31
EFHC1-232ENST00000637340 UNC5CLQ8IV45 518 aa13.12□□□□□ -0.31
EFHC1-232ENST00000637340 FAM200AQ8TCP9 573 aa13.12□□□□□ -0.31
EFHC1-232ENST00000637340 NOL10Q9BSC4 688 aaKnown RBP13.12□□□□□ -0.31
EFHC1-232ENST00000637340 BIN1O00499 593 aa13.12□□□□□ -0.31
EFHC1-232ENST00000637340 ZSWIM4Q9H7M6 989 aa13.12□□□□□ -0.31
EFHC1-232ENST00000637340 IL16Q14005 1332 aa13.12□□□□□ -0.31
EFHC1-232ENST00000637340 PRDM15P57071 1507 aaPredicted RBP13.11□□□□□ -0.31
EFHC1-232ENST00000637340 ST7Q9NRC1 585 aa13.11□□□□□ -0.31
EFHC1-232ENST00000637340 ZNF215Q9UL58 517 aaPredicted RBP13.11□□□□□ -0.31
EFHC1-232ENST00000637340 USP16Q9Y5T5 823 aa13.11□□□□□ -0.31
EFHC1-232ENST00000637340 ZMYM3Q14202 1370 aa13.11□□□□□ -0.31
EFHC1-232ENST00000637340 PTPRTO14522 1441 aa13.11□□□□□ -0.31
EFHC1-232ENST00000637340 PDILTQ8N807 584 aa13.11□□□□□ -0.31
EFHC1-232ENST00000637340 KIAA1524Q8TCG1 905 aa13.11□□□□□ -0.31
EFHC1-232ENST00000637340 SIL1Q9H173 461 aa13.11□□□□□ -0.31
EFHC1-232ENST00000637340 CFAP65Q6ZU64 1925 aaKnown RBP13.11□□□□□ -0.31
EFHC1-232ENST00000637340 MSH6P52701 1360 aa13.11□□□□□ -0.31
EFHC1-232ENST00000637340 KIAA0556O60303 1618 aa13.11□□□□□ -0.31
EFHC1-232ENST00000637340 PLEKHF1Q96S99 279 aa13.11□□□□□ -0.31
EFHC1-232ENST00000637340 RAB11FIP3O75154 756 aa13.1□□□□□ -0.31
EFHC1-232ENST00000637340 CYP2E1P05181 493 aaPredicted RBP13.1□□□□□ -0.31
EFHC1-232ENST00000637340 LIG1P18858 919 aa13.1□□□□□ -0.31
EFHC1-232ENST00000637340 AMPHP49418 695 aa13.1□□□□□ -0.31
EFHC1-232ENST00000637340 KIF18AQ8NI77 898 aa13.1□□□□□ -0.31
EFHC1-232ENST00000637340 SYNMO15061 1565 aa13.1□□□□□ -0.31
EFHC1-232ENST00000637340 URI1O94763 535 aaPredicted RBP13.1□□□□□ -0.31
EFHC1-232ENST00000637340 TAF3Q5VWG9 929 aa13.1□□□□□ -0.31
EFHC1-232ENST00000637340 RUFY2Q8WXA3 655 aa13.1□□□□□ -0.31
EFHC1-232ENST00000637340 ARHGAP45Q92619 1136 aa13.1□□□□□ -0.31
EFHC1-232ENST00000637340 NCOA3Q9Y6Q9 1424 aa13.1□□□□□ -0.31
EFHC1-232ENST00000637340 GRIN2AQ12879 1464 aa13.1□□□□□ -0.31
EFHC1-232ENST00000637340 KINO60870 393 aaKnown RBP13.1□□□□□ -0.31
EFHC1-232ENST00000637340 GNAI3P08754 354 aa13.1□□□□□ -0.31
EFHC1-232ENST00000637340 POLKQ9UBT6 870 aa13.1□□□□□ -0.31
EFHC1-232ENST00000637340 ARID5BQ14865 1188 aa13.1□□□□□ -0.31
EFHC1-232ENST00000637340 HSP90AA4PQ58FG1 418 aa13.1□□□□□ -0.31
EFHC1-232ENST00000637340 ERVK-7P63135 1459 aa13.09□□□□□ -0.31
EFHC1-232ENST00000637340 SMTNL1A8MU46 457 aa13.09□□□□□ -0.31
EFHC1-232ENST00000637340 ANXA1P04083 346 aa13.09□□□□□ -0.31
EFHC1-232ENST00000637340 ME1P48163 572 aa13.09□□□□□ -0.31
EFHC1-232ENST00000637340 UBXN4Q92575 508 aa13.09□□□□□ -0.31
EFHC1-232ENST00000637340 FEZ1Q99689 392 aa13.09□□□□□ -0.31
EFHC1-232ENST00000637340 PHF23Q9BUL5 403 aaPredicted RBP13.09□□□□□ -0.31
EFHC1-232ENST00000637340 LRRC2Q9BYS8 371 aa13.09□□□□□ -0.31
EFHC1-232ENST00000637340 C9orf78Q9NZ63 289 aaPredicted RBP13.09□□□□□ -0.31
EFHC1-232ENST00000637340 ADGBQ8N7X0 1667 aa13.09□□□□□ -0.31
EFHC1-232ENST00000637340 NCBP1Q09161 790 aaKnown RBP13.09□□□□□ -0.31
EFHC1-232ENST00000637340 LMOD2Q6P5Q4 547 aa13.09□□□□□ -0.31
EFHC1-232ENST00000637340 CALCOCO1Q9P1Z2 691 aa13.09□□□□□ -0.31
EFHC1-232ENST00000637340 EIF4G3O43432 1585 aaKnown RBP13.09□□□□□ -0.31
EFHC1-232ENST00000637340 FSD1Q9BTV5 496 aa13.09□□□□□ -0.31
EFHC1-232ENST00000637340 CBX8Q9HC52 389 aa13.09□□□□□ -0.31
EFHC1-232ENST00000637340 ARGLU1Q9NWB6 273 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms