RNA–Protein interactions for RNA: ENST00000636966.1

CACNA1A-232, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,938 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-232ENST00000636966 PHKG2P15735 406 aa10.6□□□□□ -0.71
CACNA1A-232ENST00000636966 ZNF530Q6P9A1 599 aaPredicted RBP10.6□□□□□ -0.71
CACNA1A-232ENST00000636966 TSPYL6Q8N831 410 aa10.6□□□□□ -0.71
CACNA1A-232ENST00000636966 PLIN1O60240 522 aa10.59□□□□□ -0.71
CACNA1A-232ENST00000636966 GAS2L2Q8NHY3 880 aa10.59□□□□□ -0.71
CACNA1A-232ENST00000636966 EXOC6Q8TAG9 804 aa10.59□□□□□ -0.71
CACNA1A-232ENST00000636966 RAPGEF4Q8WZA2 1011 aa10.59□□□□□ -0.71
CACNA1A-232ENST00000636966 E9PSI1 815 aa10.59□□□□□ -0.71
CACNA1A-232ENST00000636966 IL2RBP14784 551 aa10.59□□□□□ -0.71
CACNA1A-232ENST00000636966 NHSQ6T4R5 1651 aa10.59□□□□□ -0.71
CACNA1A-232ENST00000636966 KCNQ3O43525 872 aa10.59□□□□□ -0.71
CACNA1A-232ENST00000636966 ANP32AP39687 249 aaKnown RBP10.59□□□□□ -0.71
CACNA1A-232ENST00000636966 ITGB4P16144 1822 aa10.58□□□□□ -0.72
CACNA1A-232ENST00000636966 AFF2P51816 1311 aa10.58□□□□□ -0.72
CACNA1A-232ENST00000636966 AKAP4Q5JQC9 854 aa10.58□□□□□ -0.72
CACNA1A-232ENST00000636966 LAS1LQ9Y4W2 734 aaKnown RBP10.58□□□□□ -0.72
CACNA1A-232ENST00000636966 TATP17735 454 aaPredicted RBP10.58□□□□□ -0.72
CACNA1A-232ENST00000636966 SAMD1Q6SPF0 538 aaPredicted RBP10.58□□□□□ -0.72
CACNA1A-232ENST00000636966 NGEFQ8N5V2 710 aa10.58□□□□□ -0.72
CACNA1A-232ENST00000636966 USP21Q9UK80 565 aa10.58□□□□□ -0.72
CACNA1A-232ENST00000636966 CHL1O00533 1208 aa10.58□□□□□ -0.72
CACNA1A-232ENST00000636966 PLEKHO1Q53GL0 409 aaPredicted RBP10.58□□□□□ -0.72
CACNA1A-232ENST00000636966 IBTKQ9P2D0 1353 aaPredicted RBP10.58□□□□□ -0.72
CACNA1A-232ENST00000636966 AMOTQ4VCS5 1084 aa10.57□□□□□ -0.72
CACNA1A-232ENST00000636966 NPM2Q86SE8 214 aaKnown RBP10.57□□□□□ -0.72
CACNA1A-232ENST00000636966 C8orf58Q8NAV2 365 aa10.57□□□□□ -0.72
CACNA1A-232ENST00000636966 CFAP44Q96MT7 982 aa10.57□□□□□ -0.72
CACNA1A-232ENST00000636966 C5P01031 1676 aa10.57□□□□□ -0.72
CACNA1A-232ENST00000636966 EXOSC9Q06265 439 aaKnown RBP10.57□□□□□ -0.72
CACNA1A-232ENST00000636966 FBXO41Q8TF61 875 aa10.57□□□□□ -0.72
CACNA1A-232ENST00000636966 IL16Q14005 1332 aa10.57□□□□□ -0.72
CACNA1A-232ENST00000636966 RNMTO43148 476 aaKnown RBP10.57□□□□□ -0.72
CACNA1A-232ENST00000636966 FAM98CQ17RN3 349 aaKnown RBP10.57□□□□□ -0.72
CACNA1A-232ENST00000636966 ZCRB1Q8TBF4 217 aaKnown RBP10.57□□□□□ -0.72
CACNA1A-232ENST00000636966 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.57□□□□□ -0.72
CACNA1A-232ENST00000636966 BCAR3O75815 825 aa10.56□□□□□ -0.72
CACNA1A-232ENST00000636966 NEFMP07197 916 aa10.56□□□□□ -0.72
CACNA1A-232ENST00000636966 VPS72Q15906 364 aa10.56□□□□□ -0.72
CACNA1A-232ENST00000636966 DDX54Q8TDD1 881 aaKnown RBP10.56□□□□□ -0.72
CACNA1A-232ENST00000636966 RGS17Q9UGC6 210 aaPredicted RBP10.56□□□□□ -0.72
CACNA1A-232ENST00000636966 UBE2Q2Q8WVN8 375 aa10.56□□□□□ -0.72
CACNA1A-232ENST00000636966 IFT57Q9NWB7 429 aa10.56□□□□□ -0.72
CACNA1A-232ENST00000636966 NUP188Q5SRE5 1749 aa10.55□□□□□ -0.72
CACNA1A-232ENST00000636966 ELL2O00472 640 aaPredicted RBP10.55□□□□□ -0.72
CACNA1A-232ENST00000636966 ANP32EQ9BTT0 268 aa10.55□□□□□ -0.72
CACNA1A-232ENST00000636966 ATRNO75882 1429 aa10.55□□□□□ -0.72
CACNA1A-232ENST00000636966 TNS1Q9HBL0 1735 aaKnown RBP10.55□□□□□ -0.72
CACNA1A-232ENST00000636966 RNF123Q5XPI4 1314 aa10.55□□□□□ -0.72
CACNA1A-232ENST00000636966 UTRNP46939 3433 aa10.55□□□□□ -0.72
CACNA1A-232ENST00000636966 CASZ1Q86V15 1759 aa10.55□□□□□ -0.72
CACNA1A-232ENST00000636966 HTATSF1O43719 755 aaKnown RBP10.55□□□□□ -0.72
CACNA1A-232ENST00000636966 NFATC2IPQ8NCF5 419 aa10.55□□□□□ -0.72
CACNA1A-232ENST00000636966 PRAMEF22A3QJZ6 481 aa10.54□□□□□ -0.72
CACNA1A-232ENST00000636966 MARCH10Q8NA82 808 aaPredicted RBP10.54□□□□□ -0.72
CACNA1A-232ENST00000636966 TJP1Q07157 1748 aa10.54□□□□□ -0.72
CACNA1A-232ENST00000636966 NKX1-1Q15270 411 aaPredicted RBP10.54□□□□□ -0.72
CACNA1A-232ENST00000636966 FAM182BQ5T319 152 aa10.54□□□□□ -0.72
CACNA1A-232ENST00000636966 PTF1AQ7RTS3 328 aa10.54□□□□□ -0.72
CACNA1A-232ENST00000636966 BCL2L13Q9BXK5 485 aa10.54□□□□□ -0.72
CACNA1A-232ENST00000636966 SPG7Q9UQ90 795 aa10.54□□□□□ -0.72
CACNA1A-232ENST00000636966 MEX3CQ5U5Q3 659 aaKnown RBP10.54□□□□□ -0.72
CACNA1A-232ENST00000636966 BARGINQ6ZT62 677 aa10.54□□□□□ -0.72
CACNA1A-232ENST00000636966 IFNL2Q8IZJ0 200 aa10.54□□□□□ -0.72
CACNA1A-232ENST00000636966 RTF1Q92541 710 aaKnown RBP10.54□□□□□ -0.72
CACNA1A-232ENST00000636966 TNNQ9UQP3 1299 aa10.53□□□□□ -0.72
CACNA1A-232ENST00000636966 CCDC9Q9Y3X0 531 aaKnown RBP10.53□□□□□ -0.72
CACNA1A-232ENST00000636966 TNS2Q63HR2 1409 aa10.53□□□□□ -0.72
CACNA1A-232ENST00000636966 LMOD3Q0VAK6 560 aa10.53□□□□□ -0.72
CACNA1A-232ENST00000636966 SLC39A6Q13433 755 aa10.53□□□□□ -0.72
CACNA1A-232ENST00000636966 C1orf141Q5JVX7 400 aa10.53□□□□□ -0.72
CACNA1A-232ENST00000636966 C20orf194Q5TEA3 1177 aa10.53□□□□□ -0.72
CACNA1A-232ENST00000636966 GJD4Q96KN9 370 aaPredicted RBP10.53□□□□□ -0.72
CACNA1A-232ENST00000636966 PCDH11XQ9BZA7 1347 aa10.53□□□□□ -0.72
CACNA1A-232ENST00000636966 PCDH11YQ9BZA8 1340 aa10.53□□□□□ -0.72
CACNA1A-232ENST00000636966 VAMP4O75379 141 aa10.53□□□□□ -0.72
CACNA1A-232ENST00000636966 CRBNQ96SW2 442 aa10.53□□□□□ -0.72
CACNA1A-232ENST00000636966 BCORQ6W2J9 1755 aa10.53□□□□□ -0.72
CACNA1A-232ENST00000636966 TCERG1O14776 1098 aaKnown RBP10.52□□□□□ -0.72
CACNA1A-232ENST00000636966 RARSP54136 660 aaKnown RBP10.52□□□□□ -0.72
CACNA1A-232ENST00000636966 THRAP3Q9Y2W1 955 aaKnown RBP10.52□□□□□ -0.72
CACNA1A-232ENST00000636966 TAF1LQ8IZX4 1826 aa10.52□□□□□ -0.72
CACNA1A-232ENST00000636966 RNF39Q9H2S5 420 aa10.52□□□□□ -0.73
CACNA1A-232ENST00000636966 SLC52A2Q9HAB3 445 aa10.52□□□□□ -0.73
CACNA1A-232ENST00000636966 GNAI1P63096 354 aa10.52□□□□□ -0.73
CACNA1A-232ENST00000636966 TAF7Q15545 349 aaPredicted RBP10.52□□□□□ -0.73
CACNA1A-232ENST00000636966 MYH16Q9H6N6 1097 aa10.52□□□□□ -0.73
CACNA1A-232ENST00000636966 FRAT1Q92837 279 aaPredicted RBP10.52□□□□□ -0.73
CACNA1A-232ENST00000636966 DCAF5Q96JK2 942 aa10.52□□□□□ -0.73
CACNA1A-232ENST00000636966 ONECUT3O60422 494 aaPredicted RBP10.51□□□□□ -0.73
CACNA1A-232ENST00000636966 TSPYL4Q9UJ04 414 aa10.51□□□□□ -0.73
CACNA1A-232ENST00000636966 QTRT2Q9H974 415 aaKnown RBP10.51□□□□□ -0.73
CACNA1A-232ENST00000636966 SSH1Q8WYL5 1049 aa10.51□□□□□ -0.73
CACNA1A-232ENST00000636966 HEG1Q9ULI3 1381 aa10.5□□□□□ -0.73
CACNA1A-232ENST00000636966 LAMB2P55268 1798 aa10.5□□□□□ -0.73
CACNA1A-232ENST00000636966 EIF4A1P60842 406 aaKnown RBP10.5□□□□□ -0.73
CACNA1A-232ENST00000636966 BTBD11A6QL63 1104 aa10.5□□□□□ -0.73
CACNA1A-232ENST00000636966 EXOC5O00471 708 aa10.5□□□□□ -0.73
CACNA1A-232ENST00000636966 KCNQ2O43526 872 aa10.5□□□□□ -0.73
CACNA1A-232ENST00000636966 DDB1Q16531 1140 aa10.5□□□□□ -0.73
CACNA1A-232ENST00000636966 DOT1LQ8TEK3 1739 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms