RNA–Protein interactions for RNA: ENST00000636945.2

SCN8A-212, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 3,578 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-212ENST00000636945 PPP6R1Q9UPN7 881 aa9.38□□□□□ -0.91
SCN8A-212ENST00000636945 SPDYE4A6NLX3 237 aa9.37□□□□□ -0.91
SCN8A-212ENST00000636945 FAM177BA6PVY3 158 aa9.37□□□□□ -0.91
SCN8A-212ENST00000636945 TRAK1Q9UPV9 953 aa9.37□□□□□ -0.91
SCN8A-212ENST00000636945 NEXMIFQ5QGS0 1516 aa9.37□□□□□ -0.91
SCN8A-212ENST00000636945 DLG5Q8TDM6 1919 aa9.37□□□□□ -0.91
SCN8A-212ENST00000636945 CEBPAP49715 358 aaPredicted RBP9.37□□□□□ -0.91
SCN8A-212ENST00000636945 CASC1Q6TDU7 716 aa9.37□□□□□ -0.91
SCN8A-212ENST00000636945 SIGLEC1Q9BZZ2 1709 aa9.37□□□□□ -0.91
SCN8A-212ENST00000636945 FYB1O15117 783 aa9.37□□□□□ -0.91
SCN8A-212ENST00000636945 CEP85Q6P2H3 762 aa9.37□□□□□ -0.91
SCN8A-212ENST00000636945 IPO4Q8TEX9 1081 aaKnown RBP9.37□□□□□ -0.91
SCN8A-212ENST00000636945 CDK12Q9NYV4 1490 aaPredicted RBP9.36□□□□□ -0.91
SCN8A-212ENST00000636945 SMARCA5O60264 1052 aaPredicted RBP9.36□□□□□ -0.91
SCN8A-212ENST00000636945 PREX1Q8TCU6 1659 aa9.36□□□□□ -0.91
SCN8A-212ENST00000636945 TULP2O00295 520 aa9.36□□□□□ -0.91
SCN8A-212ENST00000636945 DIAPH1O60610 1272 aaKnown RBP9.36□□□□□ -0.91
SCN8A-212ENST00000636945 WDR33Q9C0J8 1336 aaKnown RBP9.36□□□□□ -0.91
SCN8A-212ENST00000636945 U2SURPO15042 1029 aaKnown RBP9.35□□□□□ -0.91
SCN8A-212ENST00000636945 VGFO15240 615 aaPredicted RBP9.35□□□□□ -0.91
SCN8A-212ENST00000636945 NFE2L2Q16236 605 aa9.35□□□□□ -0.91
SCN8A-212ENST00000636945 TCHHQ07283 1943 aa9.35□□□□□ -0.91
SCN8A-212ENST00000636945 HCLS1P14317 486 aaPredicted RBP9.35□□□□□ -0.91
SCN8A-212ENST00000636945 GNAI1P63096 354 aa9.35□□□□□ -0.91
SCN8A-212ENST00000636945 NEK4P51957 841 aa9.35□□□□□ -0.91
SCN8A-212ENST00000636945 UBE2HP62256 183 aa9.35□□□□□ -0.91
SCN8A-212ENST00000636945 MBIPQ9NS73 344 aa9.35□□□□□ -0.91
SCN8A-212ENST00000636945 RIMS1Q86UR5 1692 aaKnown RBP9.35□□□□□ -0.91
SCN8A-212ENST00000636945 SMTNL1A8MU46 457 aa9.34□□□□□ -0.91
SCN8A-212ENST00000636945 TERF2Q15554 542 aa9.34□□□□□ -0.91
SCN8A-212ENST00000636945 CREBRFQ8IUR6 639 aa9.34□□□□□ -0.91
SCN8A-212ENST00000636945 KIF18AQ8NI77 898 aa9.34□□□□□ -0.91
SCN8A-212ENST00000636945 ESYT1Q9BSJ8 1104 aa9.34□□□□□ -0.91
SCN8A-212ENST00000636945 SRCIN1Q9C0H9 1055 aa9.34□□□□□ -0.91
SCN8A-212ENST00000636945 NPATQ14207 1427 aa9.34□□□□□ -0.91
SCN8A-212ENST00000636945 CGNQ9P2M7 1197 aaKnown RBP9.34□□□□□ -0.91
SCN8A-212ENST00000636945 PALD1Q9ULE6 856 aa9.34□□□□□ -0.91
SCN8A-212ENST00000636945 NAP1L2Q9ULW6 460 aaPredicted RBP9.34□□□□□ -0.91
SCN8A-212ENST00000636945 CRYBG1Q9Y4K1 1723 aa9.34□□□□□ -0.91
SCN8A-212ENST00000636945 IRX5P78411 483 aaPredicted RBP9.33□□□□□ -0.92
SCN8A-212ENST00000636945 CHAF1AQ13111 956 aaPredicted RBP9.33□□□□□ -0.92
SCN8A-212ENST00000636945 PDE1AP54750 535 aa9.33□□□□□ -0.92
SCN8A-212ENST00000636945 TWISTNBQ3B726 338 aaPredicted RBP9.33□□□□□ -0.92
SCN8A-212ENST00000636945 C8orf58Q8NAV2 365 aa9.33□□□□□ -0.92
SCN8A-212ENST00000636945 N4BP2Q86UW6 1770 aaPredicted RBP9.32□□□□□ -0.92
SCN8A-212ENST00000636945 FER1L4A9Z1Z3 1794 aa9.32□□□□□ -0.92
SCN8A-212ENST00000636945 PHACTR3Q96KR7 559 aa9.32□□□□□ -0.92
SCN8A-212ENST00000636945 GGNBP2Q9H3C7 697 aa9.32□□□□□ -0.92
SCN8A-212ENST00000636945 GDPD2Q9HCC8 539 aa9.32□□□□□ -0.92
SCN8A-212ENST00000636945 PAXBP1Q9Y5B6 917 aa9.32□□□□□ -0.92
SCN8A-212ENST00000636945 RIMS2Q9UQ26 1411 aa9.32□□□□□ -0.92
SCN8A-212ENST00000636945 PRKAR2BP31323 418 aa9.32□□□□□ -0.92
SCN8A-212ENST00000636945 SLFNL1Q499Z3 407 aa9.32□□□□□ -0.92
SCN8A-212ENST00000636945 TMEM132EQ6IEE7 984 aa9.31□□□□□ -0.92
SCN8A-212ENST00000636945 MPNDQ8N594 471 aa9.31□□□□□ -0.92
SCN8A-212ENST00000636945 TTC14Q96N46 770 aa9.31□□□□□ -0.92
SCN8A-212ENST00000636945 ZSCAN22P10073 491 aaPredicted RBP9.31□□□□□ -0.92
SCN8A-212ENST00000636945 FOXD4L5Q5VV16 416 aaPredicted RBP9.31□□□□□ -0.92
SCN8A-212ENST00000636945 FOXD4L4Q8WXT5 416 aaPredicted RBP9.31□□□□□ -0.92
SCN8A-212ENST00000636945 KCND1Q9NSA2 647 aa9.31□□□□□ -0.92
SCN8A-212ENST00000636945 MSH6P52701 1360 aa9.31□□□□□ -0.92
SCN8A-212ENST00000636945 CABP2Q9NPB3 220 aa9.3□□□□□ -0.92
SCN8A-212ENST00000636945 STAP2Q9UGK3 403 aa9.3□□□□□ -0.92
SCN8A-212ENST00000636945 CNPY2Q9Y2B0 182 aa9.3□□□□□ -0.92
SCN8A-212ENST00000636945 NRKQ7Z2Y5 1582 aa9.3□□□□□ -0.92
SCN8A-212ENST00000636945 GOLGA6L6A8MZA4 724 aa9.3□□□□□ -0.92
SCN8A-212ENST00000636945 CHMLP26374 656 aa9.3□□□□□ -0.92
SCN8A-212ENST00000636945 RBM43Q6ZSC3 357 aaKnown RBP9.3□□□□□ -0.92
SCN8A-212ENST00000636945 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.3□□□□□ -0.92
SCN8A-212ENST00000636945 PLA2G4DQ86XP0 818 aa9.3□□□□□ -0.92
SCN8A-212ENST00000636945 ERBB3P21860 1342 aa9.3□□□□□ -0.92
SCN8A-212ENST00000636945 SETD1AO15047 1707 aaKnown RBP9.3□□□□□ -0.92
SCN8A-212ENST00000636945 AATKQ6ZMQ8 1374 aa9.3□□□□□ -0.92
SCN8A-212ENST00000636945 IGSF3O75054 1194 aa9.3□□□□□ -0.92
SCN8A-212ENST00000636945 HSPA4P34932 840 aa9.3□□□□□ -0.92
SCN8A-212ENST00000636945 ZNF771Q7L3S4 317 aaPredicted RBP9.3□□□□□ -0.92
SCN8A-212ENST00000636945 PTPRCP08575 1304 aa9.3□□□□□ -0.92
SCN8A-212ENST00000636945 KIF1BPQ96EK5 621 aa9.29□□□□□ -0.92
SCN8A-212ENST00000636945 POLKQ9UBT6 870 aa9.29□□□□□ -0.92
SCN8A-212ENST00000636945 MAP2P11137 1827 aaKnown RBP9.29□□□□□ -0.92
SCN8A-212ENST00000636945 CCDC66A2RUB6 948 aa9.29□□□□□ -0.92
SCN8A-212ENST00000636945 AOX1Q06278 1338 aa9.29□□□□□ -0.92
SCN8A-212ENST00000636945 F13A1P00488 732 aa9.29□□□□□ -0.92
SCN8A-212ENST00000636945 IL13P35225 146 aa9.29□□□□□ -0.92
SCN8A-212ENST00000636945 KRT222Q8N1A0 295 aa9.29□□□□□ -0.92
SCN8A-212ENST00000636945 THUMPD2Q9BTF0 503 aaKnown RBP9.29□□□□□ -0.92
SCN8A-212ENST00000636945 YTHDC2Q9H6S0 1430 aaKnown RBP9.29□□□□□ -0.92
SCN8A-212ENST00000636945 ZBTB22O15209 634 aa9.28□□□□□ -0.92
SCN8A-212ENST00000636945 MCCP23508 829 aa9.28□□□□□ -0.92
SCN8A-212ENST00000636945 FAM200AQ8TCP9 573 aa9.28□□□□□ -0.92
SCN8A-212ENST00000636945 CCDC171Q6TFL3 1326 aa9.28□□□□□ -0.92
SCN8A-212ENST00000636945 ATP7BP35670 1465 aa9.28□□□□□ -0.92
SCN8A-212ENST00000636945 CHD2O14647 1828 aaKnown RBP9.28□□□□□ -0.92
SCN8A-212ENST00000636945 CAPN2P17655 700 aa9.28□□□□□ -0.92
SCN8A-212ENST00000636945 PTGS1P23219 599 aa9.28□□□□□ -0.92
SCN8A-212ENST00000636945 KMT5BQ4FZB7 885 aa9.28□□□□□ -0.92
SCN8A-212ENST00000636945 NYAP1Q6ZVC0 841 aa9.28□□□□□ -0.92
SCN8A-212ENST00000636945 ZNF397Q8NF99 534 aaPredicted RBP9.28□□□□□ -0.92
SCN8A-212ENST00000636945 CDC25BP30305 580 aa9.28□□□□□ -0.92
SCN8A-212ENST00000636945 HSPA2P54652 639 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms