RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 IL17REQ8NFR9 667 aa10.82□□□□□ -0.68
PNKP-226ENST00000636840 TFCP2L1Q9NZI6 479 aa10.82□□□□□ -0.68
PNKP-226ENST00000636840 PTCD1O75127 700 aaKnown RBP10.81□□□□□ -0.68
PNKP-226ENST00000636840 TAF7Q15545 349 aaPredicted RBP10.81□□□□□ -0.68
PNKP-226ENST00000636840 PNISRQ8TF01 805 aaKnown RBP10.81□□□□□ -0.68
PNKP-226ENST00000636840 LRRC4BQ9NT99 713 aa10.81□□□□□ -0.68
PNKP-226ENST00000636840 BTAF1O14981 1849 aa10.81□□□□□ -0.68
PNKP-226ENST00000636840 SHANK3Q9BYB0 1731 aa10.81□□□□□ -0.68
PNKP-226ENST00000636840 BTBD11A6QL63 1104 aa10.8□□□□□ -0.68
PNKP-226ENST00000636840 TMPOP42166 694 aaKnown RBP10.8□□□□□ -0.68
PNKP-226ENST00000636840 NEUROD2Q15784 382 aa10.8□□□□□ -0.68
PNKP-226ENST00000636840 MCM10Q7L590 875 aa10.8□□□□□ -0.68
PNKP-226ENST00000636840 CCDC146Q8IYE0 955 aa10.8□□□□□ -0.68
PNKP-226ENST00000636840 AK7Q96M32 723 aa10.8□□□□□ -0.68
PNKP-226ENST00000636840 TEX13AQ9BXU3 409 aaPredicted RBP10.8□□□□□ -0.68
PNKP-226ENST00000636840 KDM6AO15550 1401 aaPredicted RBP10.8□□□□□ -0.68
PNKP-226ENST00000636840 DOT1LQ8TEK3 1739 aa10.8□□□□□ -0.68
PNKP-226ENST00000636840 MSH5O43196 834 aa10.79□□□□□ -0.68
PNKP-226ENST00000636840 KCNQ4P56696 695 aa10.79□□□□□ -0.68
PNKP-226ENST00000636840 DIEXFQ68CQ4 756 aaKnown RBP10.79□□□□□ -0.68
PNKP-226ENST00000636840 RGPD3A6NKT7 1758 aaPredicted RBP10.78□□□□□ -0.68
PNKP-226ENST00000636840 RGPD4Q7Z3J3 1758 aa10.78□□□□□ -0.68
PNKP-226ENST00000636840 SLC39A6Q13433 755 aa10.78□□□□□ -0.68
PNKP-226ENST00000636840 DCTN1Q14203 1278 aa10.78□□□□□ -0.68
PNKP-226ENST00000636840 RC3H1Q5TC82 1133 aaKnown RBP10.78□□□□□ -0.68
PNKP-226ENST00000636840 ZNF790Q6PG37 636 aa10.78□□□□□ -0.68
PNKP-226ENST00000636840 NPM2Q86SE8 214 aaKnown RBP10.78□□□□□ -0.68
PNKP-226ENST00000636840 VSIG10Q8N0Z9 540 aa10.78□□□□□ -0.68
PNKP-226ENST00000636840 SLC16A10Q8TF71 515 aa10.78□□□□□ -0.68
PNKP-226ENST00000636840 ITGB4P16144 1822 aa10.78□□□□□ -0.68
PNKP-226ENST00000636840 STARD3NLO95772 234 aa10.77□□□□□ -0.69
PNKP-226ENST00000636840 CALD1Q05682 793 aaKnown RBP10.77□□□□□ -0.69
PNKP-226ENST00000636840 FAM9BQ8IZU0 186 aa10.77□□□□□ -0.69
PNKP-226ENST00000636840 AKT1S1Q96B36 256 aa10.77□□□□□ -0.69
PNKP-226ENST00000636840 FMNL2Q96PY5 1086 aa10.77□□□□□ -0.69
PNKP-226ENST00000636840 SPON1Q9HCB6 807 aa10.77□□□□□ -0.69
PNKP-226ENST00000636840 ANO8Q9HCE9 1232 aaPredicted RBP10.77□□□□□ -0.69
PNKP-226ENST00000636840 CEMIPQ8WUJ3 1361 aa10.77□□□□□ -0.69
PNKP-226ENST00000636840 APAF1O14727 1248 aa10.76□□□□□ -0.69
PNKP-226ENST00000636840 CCDC184Q52MB2 194 aa10.76□□□□□ -0.69
PNKP-226ENST00000636840 BABAM1Q9NWV8 329 aa10.76□□□□□ -0.69
PNKP-226ENST00000636840 RRP7AQ9Y3A4 280 aaKnown RBP10.76□□□□□ -0.69
PNKP-226ENST00000636840 RTCBQ9Y3I0 505 aaKnown RBP10.76□□□□□ -0.69
PNKP-226ENST00000636840 SCN11AQ9UI33 1791 aa10.75□□□□□ -0.69
PNKP-226ENST00000636840 CCER2I3L3R5 266 aa10.75□□□□□ -0.69
PNKP-226ENST00000636840 SSFA2P28290 1259 aa10.75□□□□□ -0.69
PNKP-226ENST00000636840 TRAPPC3LQ5T215 181 aa10.75□□□□□ -0.69
PNKP-226ENST00000636840 RREB1Q92766 1687 aa10.74□□□□□ -0.69
PNKP-226ENST00000636840 GNPATO15228 680 aa10.74□□□□□ -0.69
PNKP-226ENST00000636840 RPS6KA4O75676 772 aa10.74□□□□□ -0.69
PNKP-226ENST00000636840 SNRPA1P09661 255 aaKnown RBP10.74□□□□□ -0.69
PNKP-226ENST00000636840 ITPK1Q13572 414 aa10.74□□□□□ -0.69
PNKP-226ENST00000636840 ZNF827Q17R98 1081 aa10.74□□□□□ -0.69
PNKP-226ENST00000636840 NGEFQ8N5V2 710 aa10.74□□□□□ -0.69
PNKP-226ENST00000636840 LINC00116Q8NCU8 138 aa10.74□□□□□ -0.69
PNKP-226ENST00000636840 MTFR1LQ9H019 292 aa10.74□□□□□ -0.69
PNKP-226ENST00000636840 PPP1R1BQ9UD71 204 aaPredicted RBP10.74□□□□□ -0.69
PNKP-226ENST00000636840 TOGARAM1Q9Y4F4 1720 aa10.74□□□□□ -0.69
PNKP-226ENST00000636840 ADRA2BP18089 450 aa10.73□□□□□ -0.69
PNKP-226ENST00000636840 POLD1P28340 1107 aa10.73□□□□□ -0.69
PNKP-226ENST00000636840 RFC4P35249 363 aa10.73□□□□□ -0.69
PNKP-226ENST00000636840 NCBP3Q53F19 620 aaKnown RBP10.73□□□□□ -0.69
PNKP-226ENST00000636840 DNAJC10Q8IXB1 793 aa10.73□□□□□ -0.69
PNKP-226ENST00000636840 ZNF496Q96IT1 587 aaPredicted RBP10.73□□□□□ -0.69
PNKP-226ENST00000636840 SLC4A9Q96Q91 983 aa10.73□□□□□ -0.69
PNKP-226ENST00000636840 TSPYL4Q9UJ04 414 aa10.73□□□□□ -0.69
PNKP-226ENST00000636840 LAS1LQ9Y4W2 734 aaKnown RBP10.73□□□□□ -0.69
PNKP-226ENST00000636840 NUP188Q5SRE5 1749 aa10.72□□□□□ -0.69
PNKP-226ENST00000636840 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.72□□□□□ -0.69
PNKP-226ENST00000636840 PHF14O94880 888 aa10.72□□□□□ -0.69
PNKP-226ENST00000636840 ZBTB7AO95365 584 aa10.72□□□□□ -0.69
PNKP-226ENST00000636840 CRKLP46109 303 aaKnown RBP10.72□□□□□ -0.69
PNKP-226ENST00000636840 COL23A1Q86Y22 540 aaPredicted RBP10.72□□□□□ -0.69
PNKP-226ENST00000636840 THUMPD2Q9BTF0 503 aaKnown RBP10.72□□□□□ -0.69
PNKP-226ENST00000636840 CHMP4AQ9BY43 222 aa10.72□□□□□ -0.69
PNKP-226ENST00000636840 CCDC87Q9NVE4 849 aa10.72□□□□□ -0.69
PNKP-226ENST00000636840 MIS18AQ9NYP9 233 aa10.72□□□□□ -0.69
PNKP-226ENST00000636840 ATF5Q9Y2D1 282 aaPredicted RBP10.72□□□□□ -0.69
PNKP-226ENST00000636840 CNTNAP4Q9C0A0 1308 aa10.72□□□□□ -0.69
PNKP-226ENST00000636840 HEG1Q9ULI3 1381 aa10.72□□□□□ -0.69
PNKP-226ENST00000636840 LY75O60449 1722 aa10.72□□□□□ -0.69
PNKP-226ENST00000636840 A0A087WZG4 1122 aa10.71□□□□□ -0.69
PNKP-226ENST00000636840 KCNQ3O43525 872 aa10.71□□□□□ -0.69
PNKP-226ENST00000636840 ZPR1O75312 459 aa10.71□□□□□ -0.69
PNKP-226ENST00000636840 CYP19A1P11511 503 aaPredicted RBP10.71□□□□□ -0.69
PNKP-226ENST00000636840 MRC1P22897 1456 aa10.71□□□□□ -0.69
PNKP-226ENST00000636840 GNAI1P63096 354 aa10.71□□□□□ -0.69
PNKP-226ENST00000636840 PNPLA7Q6ZV29 1317 aa10.71□□□□□ -0.69
PNKP-226ENST00000636840 TRIM35Q9UPQ4 493 aa10.71□□□□□ -0.69
PNKP-226ENST00000636840 EIF4A1P60842 406 aaKnown RBP10.7□□□□□ -0.7
PNKP-226ENST00000636840 CCDC27Q2M243 656 aa10.7□□□□□ -0.7
PNKP-226ENST00000636840 NLGN1Q8N2Q7 840 aa10.7□□□□□ -0.7
PNKP-226ENST00000636840 CFAP44Q96MT7 982 aa10.7□□□□□ -0.7
PNKP-226ENST00000636840 CHL1O00533 1208 aa10.69□□□□□ -0.7
PNKP-226ENST00000636840 CANXP27824 592 aaKnown RBP10.69□□□□□ -0.7
PNKP-226ENST00000636840 INTS5Q6P9B9 1019 aaKnown RBP10.69□□□□□ -0.7
PNKP-226ENST00000636840 ARHGEF1Q92888 912 aaKnown RBP10.69□□□□□ -0.7
PNKP-226ENST00000636840 ARXQ96QS3 562 aa10.69□□□□□ -0.7
PNKP-226ENST00000636840 ADAMTS7Q9UKP4 1686 aa10.69□□□□□ -0.7
PNKP-226ENST00000636840 DCAF8L1A6NGE4 600 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms