RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 NRAPQ86VF7 1730 aa9.09□□□□□ -0.95
UPF3B-205ENST00000636792 ANP32CO43423 234 aa9.09□□□□□ -0.95
UPF3B-205ENST00000636792 XPCQ01831 940 aaPredicted RBP9.09□□□□□ -0.95
UPF3B-205ENST00000636792 MORC1Q86VD1 984 aa9.09□□□□□ -0.95
UPF3B-205ENST00000636792 DDX17Q92841 729 aaKnown RBP9.09□□□□□ -0.95
UPF3B-205ENST00000636792 INSRP06213 1382 aa9.09□□□□□ -0.95
UPF3B-205ENST00000636792 FLT4P35916 1363 aa9.09□□□□□ -0.95
UPF3B-205ENST00000636792 MYBBP1AQ9BQG0 1328 aaKnown RBP9.08□□□□□ -0.96
UPF3B-205ENST00000636792 BHMG1C9JSJ3 638 aaPredicted RBP9.08□□□□□ -0.96
UPF3B-205ENST00000636792 GCP02774 474 aa9.08□□□□□ -0.96
UPF3B-205ENST00000636792 HSPA1LP34931 641 aa9.08□□□□□ -0.96
UPF3B-205ENST00000636792 FOSBP53539 338 aa9.08□□□□□ -0.96
UPF3B-205ENST00000636792 NBPF3Q9H094 633 aa9.08□□□□□ -0.96
UPF3B-205ENST00000636792 GGNBP2Q9H3C7 697 aa9.08□□□□□ -0.96
UPF3B-205ENST00000636792 PRKRIP1Q9H875 184 aaPredicted RBP9.08□□□□□ -0.96
UPF3B-205ENST00000636792 PEAK1Q9H792 1746 aa9.08□□□□□ -0.96
UPF3B-205ENST00000636792 LMOD2Q6P5Q4 547 aa9.07□□□□□ -0.96
UPF3B-205ENST00000636792 RYDENQ9NUL5 291 aaKnown RBP9.07□□□□□ -0.96
UPF3B-205ENST00000636792 RGPD5Q99666 1765 aa9.07□□□□□ -0.96
UPF3B-205ENST00000636792 SLIT2O94813 1529 aa9.06□□□□□ -0.96
UPF3B-205ENST00000636792 RGPD1P0DJD0 1748 aa9.06□□□□□ -0.96
UPF3B-205ENST00000636792 WNK3Q9BYP7 1800 aa9.06□□□□□ -0.96
UPF3B-205ENST00000636792 HAP1P54257 671 aaPredicted RBP9.06□□□□□ -0.96
UPF3B-205ENST00000636792 DIEXFQ68CQ4 756 aaKnown RBP9.06□□□□□ -0.96
UPF3B-205ENST00000636792 ARHGEF25Q86VW2 580 aa9.06□□□□□ -0.96
UPF3B-205ENST00000636792 ZBED2Q9BTP6 218 aa9.06□□□□□ -0.96
UPF3B-205ENST00000636792 LRP6O75581 1613 aa9.05□□□□□ -0.96
UPF3B-205ENST00000636792 COL3A1P02461 1466 aaPredicted RBP9.05□□□□□ -0.96
UPF3B-205ENST00000636792 KIAA0232Q92628 1395 aa9.05□□□□□ -0.96
UPF3B-205ENST00000636792 PPP1R15BQ5SWA1 713 aa9.05□□□□□ -0.96
UPF3B-205ENST00000636792 CC2D1BQ5T0F9 858 aaKnown RBP9.05□□□□□ -0.96
UPF3B-205ENST00000636792 NCAPD2Q15021 1401 aa9.05□□□□□ -0.96
UPF3B-205ENST00000636792 MAP3K19Q56UN5 1328 aa9.05□□□□□ -0.96
UPF3B-205ENST00000636792 COL5A2P05997 1499 aaPredicted RBP9.04□□□□□ -0.96
UPF3B-205ENST00000636792 CFAP53Q96M91 514 aa9.04□□□□□ -0.96
UPF3B-205ENST00000636792 PARP4Q9UKK3 1724 aaKnown RBP9.04□□□□□ -0.96
UPF3B-205ENST00000636792 CCER2I3L3R5 266 aa9.03□□□□□ -0.96
UPF3B-205ENST00000636792 PPP2R1AP30153 589 aa9.03□□□□□ -0.96
UPF3B-205ENST00000636792 IP6K1Q92551 441 aa9.03□□□□□ -0.96
UPF3B-205ENST00000636792 ZDHHC16Q969W1 377 aa9.03□□□□□ -0.96
UPF3B-205ENST00000636792 CRISPLD2Q9H0B8 497 aa9.03□□□□□ -0.96
UPF3B-205ENST00000636792 PRDM11Q9NQV5 511 aa9.03□□□□□ -0.96
UPF3B-205ENST00000636792 POLKQ9UBT6 870 aa9.03□□□□□ -0.96
UPF3B-205ENST00000636792 HOXC9P31274 260 aa9.02□□□□□ -0.97
UPF3B-205ENST00000636792 AMPHP49418 695 aa9.02□□□□□ -0.97
UPF3B-205ENST00000636792 CRB1P82279 1406 aa9.01□□□□□ -0.97
UPF3B-205ENST00000636792 NUTM2GQ5VZR2 741 aa9.01□□□□□ -0.97
UPF3B-205ENST00000636792 FNBP4Q8N3X1 1017 aaPredicted RBP9.01□□□□□ -0.97
UPF3B-205ENST00000636792 ANO8Q9HCE9 1232 aaPredicted RBP9.01□□□□□ -0.97
UPF3B-205ENST00000636792 PKD1L3Q7Z443 1732 aa9□□□□□ -0.97
UPF3B-205ENST00000636792 PDE4AP27815 886 aa9□□□□□ -0.97
UPF3B-205ENST00000636792 MTHFSP49914 203 aa9□□□□□ -0.97
UPF3B-205ENST00000636792 CABLES1Q8TDN4 633 aa9□□□□□ -0.97
UPF3B-205ENST00000636792 NUDCQ9Y266 331 aa9□□□□□ -0.97
UPF3B-205ENST00000636792 EMILIN1Q9Y6C2 1016 aa9□□□□□ -0.97
UPF3B-205ENST00000636792 WDR17Q8IZU2 1322 aa9□□□□□ -0.97
UPF3B-205ENST00000636792 KDRP35968 1356 aa8.99□□□□□ -0.97
UPF3B-205ENST00000636792 RGPD2P0DJD1 1756 aa8.99□□□□□ -0.97
UPF3B-205ENST00000636792 EVI5O60447 810 aa8.99□□□□□ -0.97
UPF3B-205ENST00000636792 ZC3H6P61129 1189 aaKnown RBP8.99□□□□□ -0.97
UPF3B-205ENST00000636792 RRS1Q15050 365 aaKnown RBP8.99□□□□□ -0.97
UPF3B-205ENST00000636792 MEX3CQ5U5Q3 659 aaKnown RBP8.99□□□□□ -0.97
UPF3B-205ENST00000636792 ANKK1Q8NFD2 765 aa8.99□□□□□ -0.97
UPF3B-205ENST00000636792 ADAM33Q9BZ11 813 aa8.99□□□□□ -0.97
UPF3B-205ENST00000636792 THRAP3Q9Y2W1 955 aaKnown RBP8.99□□□□□ -0.97
UPF3B-205ENST00000636792 BCL9LQ86UU0 1499 aa8.99□□□□□ -0.97
UPF3B-205ENST00000636792 IGSF1Q8N6C5 1336 aa8.99□□□□□ -0.97
UPF3B-205ENST00000636792 ATRNO75882 1429 aa8.98□□□□□ -0.97
UPF3B-205ENST00000636792 THSD7AQ9UPZ6 1657 aa8.97□□□□□ -0.97
UPF3B-205ENST00000636792 FAM83GA6ND36 823 aa8.97□□□□□ -0.97
UPF3B-205ENST00000636792 DIAPH1O60610 1272 aaKnown RBP8.97□□□□□ -0.97
UPF3B-205ENST00000636792 TNNT2P45379 298 aaPredicted RBP8.97□□□□□ -0.97
UPF3B-205ENST00000636792 ZNF772Q68DY9 489 aaPredicted RBP8.97□□□□□ -0.97
UPF3B-205ENST00000636792 UNC5CLQ8IV45 518 aa8.97□□□□□ -0.97
UPF3B-205ENST00000636792 CDCA7Q9BWT1 371 aaPredicted RBP8.97□□□□□ -0.97
UPF3B-205ENST00000636792 PNNQ9H307 717 aaKnown RBP8.97□□□□□ -0.97
UPF3B-205ENST00000636792 NUTM2BA6NNL0 878 aaPredicted RBP8.96□□□□□ -0.98
UPF3B-205ENST00000636792 NUTM2EB1AL46 878 aaPredicted RBP8.96□□□□□ -0.98
UPF3B-205ENST00000636792 PPP1R3GB7ZBB8 358 aa8.96□□□□□ -0.98
UPF3B-205ENST00000636792 EIF4A2Q14240 407 aaKnown RBP8.96□□□□□ -0.98
UPF3B-205ENST00000636792 VPS72Q15906 364 aa8.96□□□□□ -0.98
UPF3B-205ENST00000636792 NUTM2AQ8IVF1 878 aaPredicted RBP8.96□□□□□ -0.98
UPF3B-205ENST00000636792 ANKRD24Q8TF21 1146 aa8.96□□□□□ -0.98
UPF3B-205ENST00000636792 NGLY1Q96IV0 654 aa8.96□□□□□ -0.98
UPF3B-205ENST00000636792 CARD10Q9BWT7 1032 aa8.96□□□□□ -0.98
UPF3B-205ENST00000636792 BTG4Q9NY30 223 aa8.96□□□□□ -0.98
UPF3B-205ENST00000636792 DISP2A7MBM2 1401 aa8.96□□□□□ -0.98
UPF3B-205ENST00000636792 GLI3P10071 1580 aa8.95□□□□□ -0.98
UPF3B-205ENST00000636792 LRRC37A3O60309 1634 aa8.95□□□□□ -0.98
UPF3B-205ENST00000636792 PPM1GO15355 546 aaPredicted RBP8.95□□□□□ -0.98
UPF3B-205ENST00000636792 ADAMTS2O95450 1211 aa8.95□□□□□ -0.98
UPF3B-205ENST00000636792 ITGBL1O95965 494 aaPredicted RBP8.95□□□□□ -0.98
UPF3B-205ENST00000636792 IL13P35225 146 aa8.95□□□□□ -0.98
UPF3B-205ENST00000636792 MAP3K9P80192 1104 aa8.95□□□□□ -0.98
UPF3B-205ENST00000636792 CHRNA2Q15822 529 aa8.95□□□□□ -0.98
UPF3B-205ENST00000636792 HSP90AB2PQ58FF8 381 aa8.95□□□□□ -0.98
UPF3B-205ENST00000636792 C8orf37Q96NL8 207 aa8.95□□□□□ -0.98
UPF3B-205ENST00000636792 RABGEF1Q9UJ41 708 aa8.95□□□□□ -0.98
UPF3B-205ENST00000636792 TRPC5Q9UL62 973 aaPredicted RBP8.95□□□□□ -0.98
UPF3B-205ENST00000636792 AFF2P51816 1311 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms