RNA–Protein interactions for RNA: ENST00000636767.1

CLN5-215, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,368 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-215ENST00000636767 LRSAM1Q6UWE0 723 aa26.32■■□□□ 1.8
CLN5-215ENST00000636767 MAP3K19Q56UN5 1328 aa26.32■■□□□ 1.8
CLN5-215ENST00000636767 ARHGEF10O15013 1369 aa26.32■■□□□ 1.8
CLN5-215ENST00000636767 USP6P35125 1406 aa26.32■■□□□ 1.8
CLN5-215ENST00000636767 FOXD4L5Q5VV16 416 aaPredicted RBP26.32■■□□□ 1.8
CLN5-215ENST00000636767 FOXD4L4Q8WXT5 416 aaPredicted RBP26.32■■□□□ 1.8
CLN5-215ENST00000636767 USP31Q70CQ4 1352 aa26.31■■□□□ 1.8
CLN5-215ENST00000636767 NOL7Q9UMY1 257 aaKnown RBP26.31■■□□□ 1.8
CLN5-215ENST00000636767 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.31■■□□□ 1.8
CLN5-215ENST00000636767 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.31■■□□□ 1.8
CLN5-215ENST00000636767 FMN2Q9NZ56 1722 aa26.3■■□□□ 1.8
CLN5-215ENST00000636767 SYCE3A1L190 88 aa26.3■■□□□ 1.8
CLN5-215ENST00000636767 MCM2P49736 904 aa26.3■■□□□ 1.8
CLN5-215ENST00000636767 CUL4AQ13619 759 aa26.3■■□□□ 1.8
CLN5-215ENST00000636767 MTHFSDQ2M296 383 aaKnown RBP26.3■■□□□ 1.8
CLN5-215ENST00000636767 PALD1Q9ULE6 856 aa26.3■■□□□ 1.8
CLN5-215ENST00000636767 KIF13AQ9H1H9 1805 aa26.3■■□□□ 1.8
CLN5-215ENST00000636767 BRD1O95696 1058 aa26.29■■□□□ 1.8
CLN5-215ENST00000636767 EIF2AK3Q9NZJ5 1116 aaKnown RBP26.29■■□□□ 1.8
CLN5-215ENST00000636767 LRRCC1Q9C099 1032 aa26.29■■□□□ 1.8
CLN5-215ENST00000636767 MX1P20591 662 aa26.28■■□□□ 1.8
CLN5-215ENST00000636767 RTF1Q92541 710 aaKnown RBP26.28■■□□□ 1.8
CLN5-215ENST00000636767 FAM208AQ9UK61 1670 aaKnown RBP26.28■■□□□ 1.8
CLN5-215ENST00000636767 SOX12O15370 315 aa26.27■■□□□ 1.8
CLN5-215ENST00000636767 MBD3O95983 291 aa26.27■■□□□ 1.8
CLN5-215ENST00000636767 XRN1Q8IZH2 1706 aaKnown RBP26.27■■□□□ 1.8
CLN5-215ENST00000636767 PLEKHG3A1L390 1219 aa26.27■■□□□ 1.8
CLN5-215ENST00000636767 ZNF500O60304 480 aaPredicted RBP26.26■■□□□ 1.79
CLN5-215ENST00000636767 MCCP23508 829 aa26.26■■□□□ 1.79
CLN5-215ENST00000636767 CHMLP26374 656 aa26.26■■□□□ 1.79
CLN5-215ENST00000636767 PNMA6EA0A0J9YXQ4 647 aa26.26■■□□□ 1.79
CLN5-215ENST00000636767 NUTM2FA1L443 756 aa26.25■■□□□ 1.79
CLN5-215ENST00000636767 ANAPC15P60006 121 aa26.25■■□□□ 1.79
CLN5-215ENST00000636767 SSH2Q76I76 1423 aa26.25■■□□□ 1.79
CLN5-215ENST00000636767 INTS4Q96HW7 963 aaKnown RBP26.24■■□□□ 1.79
CLN5-215ENST00000636767 ANO2Q9NQ90 1003 aa26.24■■□□□ 1.79
CLN5-215ENST00000636767 KDRP35968 1356 aa26.24■■□□□ 1.79
CLN5-215ENST00000636767 STK31Q9BXU1 1019 aa26.24■■□□□ 1.79
CLN5-215ENST00000636767 TERF1P54274 439 aa26.23■■□□□ 1.79
CLN5-215ENST00000636767 LRRC37A3O60309 1634 aa26.23■■□□□ 1.79
CLN5-215ENST00000636767 GNAI3P08754 354 aa26.22■■□□□ 1.79
CLN5-215ENST00000636767 HDGFP51858 240 aaKnown RBP26.22■■□□□ 1.79
CLN5-215ENST00000636767 ATP8B2P98198 1209 aa26.22■■□□□ 1.79
CLN5-215ENST00000636767 FLIIQ13045 1269 aa26.22■■□□□ 1.79
CLN5-215ENST00000636767 NOL8Q76FK4 1167 aaKnown RBP26.22■■□□□ 1.79
CLN5-215ENST00000636767 RILPL2Q969X0 211 aa26.22■■□□□ 1.79
CLN5-215ENST00000636767 CEP170BQ9Y4F5 1589 aaPredicted RBP26.22■■□□□ 1.79
CLN5-215ENST00000636767 TRIM6-TRIM34B2RNG4 842 aa26.22■■□□□ 1.79
CLN5-215ENST00000636767 IL17RAQ96F46 866 aa26.22■■□□□ 1.79
CLN5-215ENST00000636767 STAP2Q9UGK3 403 aa26.22■■□□□ 1.79
CLN5-215ENST00000636767 ZKSCAN5Q9Y2L8 839 aa26.22■■□□□ 1.79
CLN5-215ENST00000636767 ADAMTS13Q76LX8 1427 aa26.22■■□□□ 1.79
CLN5-215ENST00000636767 N4BP2Q86UW6 1770 aaPredicted RBP26.21■■□□□ 1.79
CLN5-215ENST00000636767 FLT4P35916 1363 aa26.2■■□□□ 1.79
CLN5-215ENST00000636767 FKBP5Q13451 457 aaPredicted RBP26.2■■□□□ 1.79
CLN5-215ENST00000636767 XPCQ01831 940 aaPredicted RBP26.2■■□□□ 1.78
CLN5-215ENST00000636767 UNC5CLQ8IV45 518 aa26.2■■□□□ 1.78
CLN5-215ENST00000636767 SBNO1A3KN83 1393 aa26.19■■□□□ 1.78
CLN5-215ENST00000636767 TMEM2Q9UHN6 1383 aa26.19■■□□□ 1.78
CLN5-215ENST00000636767 RNF214Q8ND24 703 aa26.18■■□□□ 1.78
CLN5-215ENST00000636767 IGSF1Q8N6C5 1336 aa26.18■■□□□ 1.78
CLN5-215ENST00000636767 UBR1Q8IWV7 1749 aa26.18■■□□□ 1.78
CLN5-215ENST00000636767 UPF3BQ9BZI7 483 aaKnown RBP26.18■■□□□ 1.78
CLN5-215ENST00000636767 SRCIN1Q9C0H9 1055 aa26.18■■□□□ 1.78
CLN5-215ENST00000636767 R3HCC1Q9Y3T6 440 aaKnown RBP26.18■■□□□ 1.78
CLN5-215ENST00000636767 LRRFIP2Q9Y608 721 aaKnown RBP26.18■■□□□ 1.78
CLN5-215ENST00000636767 CCDC30Q5VVM6 783 aa26.17■■□□□ 1.78
CLN5-215ENST00000636767 MCM5P33992 734 aa26.17■■□□□ 1.78
CLN5-215ENST00000636767 EYA1Q99502 592 aa26.17■■□□□ 1.78
CLN5-215ENST00000636767 CCDC39Q9UFE4 941 aa26.17■■□□□ 1.78
CLN5-215ENST00000636767 IL25Q9H293 177 aa26.16■■□□□ 1.78
CLN5-215ENST00000636767 NECTIN2Q92692 538 aa26.15■■□□□ 1.78
CLN5-215ENST00000636767 PDCL3Q9H2J4 239 aa26.15■■□□□ 1.78
CLN5-215ENST00000636767 AOX1Q06278 1338 aa26.15■■□□□ 1.78
CLN5-215ENST00000636767 TSPY26PQ9H489 355 aa26.15■■□□□ 1.78
CLN5-215ENST00000636767 TNRQ92752 1358 aa26.14■■□□□ 1.78
CLN5-215ENST00000636767 TTC21AQ8NDW8 1320 aa26.14■■□□□ 1.78
CLN5-215ENST00000636767 VSIG10Q8N0Z9 540 aa26.14■■□□□ 1.78
CLN5-215ENST00000636767 PXDNLA1KZ92 1463 aa26.14■■□□□ 1.78
CLN5-215ENST00000636767 CACNA1FO60840 1977 aa26.13■■□□□ 1.77
CLN5-215ENST00000636767 SYAP1Q96A49 352 aaPredicted RBP26.13■■□□□ 1.77
CLN5-215ENST00000636767 HTATSF1O43719 755 aaKnown RBP26.12■■□□□ 1.77
CLN5-215ENST00000636767 GADD45BO75293 160 aaPredicted RBP26.12■■□□□ 1.77
CLN5-215ENST00000636767 USP44Q9H0E7 712 aa26.12■■□□□ 1.77
CLN5-215ENST00000636767 ESF1Q9H501 851 aaKnown RBP26.12■■□□□ 1.77
CLN5-215ENST00000636767 GDPD2Q9HCC8 539 aa26.12■■□□□ 1.77
CLN5-215ENST00000636767 SOS1Q07889 1333 aaPredicted RBP26.11■■□□□ 1.77
CLN5-215ENST00000636767 EPB41L2O43491 1005 aaKnown RBP26.11■■□□□ 1.77
CLN5-215ENST00000636767 HSPA4P34932 840 aa26.11■■□□□ 1.77
CLN5-215ENST00000636767 FOXD4L6Q3SYB3 417 aaPredicted RBP26.11■■□□□ 1.77
CLN5-215ENST00000636767 FOXD4L3Q6VB84 417 aaPredicted RBP26.11■■□□□ 1.77
CLN5-215ENST00000636767 IL1RAPL2Q9NP60 686 aa26.11■■□□□ 1.77
CLN5-215ENST00000636767 WDR33Q9C0J8 1336 aaKnown RBP26.1■■□□□ 1.77
CLN5-215ENST00000636767 AMPHP49418 695 aa26.1■■□□□ 1.77
CLN5-215ENST00000636767 CSPP1Q1MSJ5 1256 aa26.1■■□□□ 1.77
CLN5-215ENST00000636767 RPAP1Q9BWH6 1393 aaPredicted RBP26.09■■□□□ 1.77
CLN5-215ENST00000636767 GNAT3A8MTJ3 354 aa26.09■■□□□ 1.77
CLN5-215ENST00000636767 USP48Q86UV5 1035 aa26.09■■□□□ 1.77
CLN5-215ENST00000636767 SSH3Q8TE77 659 aa26.09■■□□□ 1.77
CLN5-215ENST00000636767 UBTFL1P0CB47 393 aaPredicted RBP26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms