RNA–Protein interactions for RNA: ENST00000636595.1

CACNA1D-213, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 5

Gene CACNA1D, Length 1,600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-213ENST00000636595 SLC52A2Q9HAB3 445 aa17.37■□□□□ 0.37
CACNA1D-213ENST00000636595 MRC1P22897 1456 aa17.37■□□□□ 0.37
CACNA1D-213ENST00000636595 GLI3P10071 1580 aa17.37■□□□□ 0.37
CACNA1D-213ENST00000636595 ERVV-2B6SEH9 535 aa17.36■□□□□ 0.37
CACNA1D-213ENST00000636595 BTBD11A6QL63 1104 aa17.36■□□□□ 0.37
CACNA1D-213ENST00000636595 ZNF428Q96B54 188 aa17.35■□□□□ 0.37
CACNA1D-213ENST00000636595 VIRMAQ69YN4 1812 aaKnown RBP17.34■□□□□ 0.37
CACNA1D-213ENST00000636595 ONECUT3O60422 494 aaPredicted RBP17.34■□□□□ 0.37
CACNA1D-213ENST00000636595 CABP4P57796 275 aa17.34■□□□□ 0.37
CACNA1D-213ENST00000636595 MIS18AQ9NYP9 233 aa17.34■□□□□ 0.37
CACNA1D-213ENST00000636595 A0A0G2JS52 829 aa17.33■□□□□ 0.37
CACNA1D-213ENST00000636595 MYT1Q01538 1121 aa17.33■□□□□ 0.37
CACNA1D-213ENST00000636595 NFATC2IPQ8NCF5 419 aa17.33■□□□□ 0.37
CACNA1D-213ENST00000636595 SUPT16HQ9Y5B9 1047 aaKnown RBP17.33■□□□□ 0.37
CACNA1D-213ENST00000636595 THSD7AQ9UPZ6 1657 aa17.33■□□□□ 0.37
CACNA1D-213ENST00000636595 SIPA1L3O60292 1781 aaPredicted RBP17.33■□□□□ 0.36
CACNA1D-213ENST00000636595 SOS1Q07889 1333 aaPredicted RBP17.32■□□□□ 0.36
CACNA1D-213ENST00000636595 TWISTNBQ3B726 338 aaPredicted RBP17.32■□□□□ 0.36
CACNA1D-213ENST00000636595 SEPT12Q8IYM1 358 aa17.31■□□□□ 0.36
CACNA1D-213ENST00000636595 KDM3BQ7LBC6 1761 aa17.3■□□□□ 0.36
CACNA1D-213ENST00000636595 MARCH10Q8NA82 808 aaPredicted RBP17.3■□□□□ 0.36
CACNA1D-213ENST00000636595 C8orf58Q8NAV2 365 aa17.3■□□□□ 0.36
CACNA1D-213ENST00000636595 UPF1Q92900 1129 aaKnown RBP eCLIP17.3■□□□□ 0.36
CACNA1D-213ENST00000636595 VAMP4O75379 141 aa17.29■□□□□ 0.36
CACNA1D-213ENST00000636595 RARSP54136 660 aaKnown RBP17.29■□□□□ 0.36
CACNA1D-213ENST00000636595 ZNF790Q6PG37 636 aa17.29■□□□□ 0.36
CACNA1D-213ENST00000636595 TMOD3Q9NYL9 352 aa17.29■□□□□ 0.36
CACNA1D-213ENST00000636595 RNF123Q5XPI4 1314 aa17.29■□□□□ 0.36
CACNA1D-213ENST00000636595 EIF4A1P60842 406 aaKnown RBP17.29■□□□□ 0.36
CACNA1D-213ENST00000636595 ALDH1L2Q3SY69 923 aa17.29■□□□□ 0.36
CACNA1D-213ENST00000636595 TTC5Q8N0Z6 440 aa17.29■□□□□ 0.36
CACNA1D-213ENST00000636595 TSPYL6Q8N831 410 aa17.29■□□□□ 0.36
CACNA1D-213ENST00000636595 CHMP4AQ9BY43 222 aa17.29■□□□□ 0.36
CACNA1D-213ENST00000636595 ELL2O00472 640 aaPredicted RBP17.28■□□□□ 0.36
CACNA1D-213ENST00000636595 HOXB7P09629 217 aa17.28■□□□□ 0.36
CACNA1D-213ENST00000636595 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.28■□□□□ 0.36
CACNA1D-213ENST00000636595 TOGARAM1Q9Y4F4 1720 aa17.27■□□□□ 0.36
CACNA1D-213ENST00000636595 NEFLP07196 543 aa17.26■□□□□ 0.35
CACNA1D-213ENST00000636595 RRP1P56182 461 aaKnown RBP17.26■□□□□ 0.35
CACNA1D-213ENST00000636595 KRT24Q2M2I5 525 aa17.26■□□□□ 0.35
CACNA1D-213ENST00000636595 KCNQ3O43525 872 aa17.25■□□□□ 0.35
CACNA1D-213ENST00000636595 SMC4Q9NTJ3 1288 aa17.25■□□□□ 0.35
CACNA1D-213ENST00000636595 HEG1Q9ULI3 1381 aa17.25■□□□□ 0.35
CACNA1D-213ENST00000636595 BCL9O00512 1426 aa17.25■□□□□ 0.35
CACNA1D-213ENST00000636595 BCAR3O75815 825 aa17.25■□□□□ 0.35
CACNA1D-213ENST00000636595 SLC39A6Q13433 755 aa17.25■□□□□ 0.35
CACNA1D-213ENST00000636595 BRWD3Q6RI45 1802 aa17.25■□□□□ 0.35
CACNA1D-213ENST00000636595 SSH1Q8WYL5 1049 aa17.24■□□□□ 0.35
CACNA1D-213ENST00000636595 PIGBQ92521 554 aa17.24■□□□□ 0.35
CACNA1D-213ENST00000636595 FMNL2Q96PY5 1086 aa17.24■□□□□ 0.35
CACNA1D-213ENST00000636595 PRIM1P49642 420 aaKnown RBP17.23■□□□□ 0.35
CACNA1D-213ENST00000636595 BRPF1P55201 1214 aaPredicted RBP17.23■□□□□ 0.35
CACNA1D-213ENST00000636595 FAM182BQ5T319 152 aa17.23■□□□□ 0.35
CACNA1D-213ENST00000636595 KRT27Q7Z3Y8 459 aa17.23■□□□□ 0.35
CACNA1D-213ENST00000636595 SYTL4Q96C24 671 aaPredicted RBP17.23■□□□□ 0.35
CACNA1D-213ENST00000636595 DOT1LQ8TEK3 1739 aa17.23■□□□□ 0.35
CACNA1D-213ENST00000636595 GIGYF1O75420 1035 aaPredicted RBP17.22■□□□□ 0.35
CACNA1D-213ENST00000636595 BCL2L13Q9BXK5 485 aa17.22■□□□□ 0.35
CACNA1D-213ENST00000636595 KIF16BQ96L93 1317 aa17.22■□□□□ 0.35
CACNA1D-213ENST00000636595 PAPPAQ13219 1627 aa17.22■□□□□ 0.35
CACNA1D-213ENST00000636595 CCDC30Q5VVM6 783 aa17.21■□□□□ 0.35
CACNA1D-213ENST00000636595 ZNF496Q96IT1 587 aaPredicted RBP17.21■□□□□ 0.35
CACNA1D-213ENST00000636595 ITGB4P16144 1822 aa17.21■□□□□ 0.35
CACNA1D-213ENST00000636595 CANXP27824 592 aaKnown RBP17.21■□□□□ 0.35
CACNA1D-213ENST00000636595 HDGFL1Q5TGJ6 251 aa17.21■□□□□ 0.35
CACNA1D-213ENST00000636595 STK31Q9BXU1 1019 aa17.21■□□□□ 0.35
CACNA1D-213ENST00000636595 SNRPA1P09661 255 aaKnown RBP17.2■□□□□ 0.34
CACNA1D-213ENST00000636595 ACSBG1Q96GR2 724 aa17.2■□□□□ 0.34
CACNA1D-213ENST00000636595 IPO8O15397 1037 aaKnown RBP17.19■□□□□ 0.34
CACNA1D-213ENST00000636595 MRPL50Q8N5N7 158 aaKnown RBP17.19■□□□□ 0.34
CACNA1D-213ENST00000636595 FRAT1Q92837 279 aaPredicted RBP17.19■□□□□ 0.34
CACNA1D-213ENST00000636595 UBR2Q8IWV8 1755 aa17.18■□□□□ 0.34
CACNA1D-213ENST00000636595 ATG3Q9NT62 314 aa17.18■□□□□ 0.34
CACNA1D-213ENST00000636595 ASAP1Q9ULH1 1129 aa17.18■□□□□ 0.34
CACNA1D-213ENST00000636595 KCPQ6ZWJ8 1503 aa17.18■□□□□ 0.34
CACNA1D-213ENST00000636595 PLIN1O60240 522 aa17.18■□□□□ 0.34
CACNA1D-213ENST00000636595 ZKSCAN2Q63HK3 967 aa17.18■□□□□ 0.34
CACNA1D-213ENST00000636595 VSIG10Q8N0Z9 540 aa17.18■□□□□ 0.34
CACNA1D-213ENST00000636595 MS4A1P11836 297 aa17.17■□□□□ 0.34
CACNA1D-213ENST00000636595 EIF2S2P20042 333 aaKnown RBP17.17■□□□□ 0.34
CACNA1D-213ENST00000636595 FAM196AQ6ZSG2 479 aa17.17■□□□□ 0.34
CACNA1D-213ENST00000636595 ARHGAP45Q92619 1136 aa17.17■□□□□ 0.34
CACNA1D-213ENST00000636595 KAT6BQ8WYB5 2073 aa17.16■□□□□ 0.34
CACNA1D-213ENST00000636595 PTCD1O75127 700 aaKnown RBP17.16■□□□□ 0.34
CACNA1D-213ENST00000636595 SLC4A2P04920 1241 aa17.16■□□□□ 0.34
CACNA1D-213ENST00000636595 PDE3AQ14432 1141 aa17.16■□□□□ 0.34
CACNA1D-213ENST00000636595 SMARCC1Q92922 1105 aaPredicted RBP17.16■□□□□ 0.34
CACNA1D-213ENST00000636595 TEX13AQ9BXU3 409 aaPredicted RBP17.16■□□□□ 0.34
CACNA1D-213ENST00000636595 TCERG1O14776 1098 aaKnown RBP17.15■□□□□ 0.34
CACNA1D-213ENST00000636595 KCNQ2O43526 872 aa17.15■□□□□ 0.34
CACNA1D-213ENST00000636595 DBF4Q9UBU7 674 aaPredicted RBP17.15■□□□□ 0.34
CACNA1D-213ENST00000636595 NOB1Q9ULX3 412 aaKnown RBP17.15■□□□□ 0.34
CACNA1D-213ENST00000636595 GTF3C3Q9Y5Q9 886 aa17.15■□□□□ 0.34
CACNA1D-213ENST00000636595 FKBP8Q14318 412 aa17.14■□□□□ 0.33
CACNA1D-213ENST00000636595 ATF7IPQ6VMQ6 1270 aa17.14■□□□□ 0.33
CACNA1D-213ENST00000636595 NECTIN2Q92692 538 aa17.14■□□□□ 0.33
CACNA1D-213ENST00000636595 NHSQ6T4R5 1651 aa17.14■□□□□ 0.33
CACNA1D-213ENST00000636595 PTPRCP08575 1304 aa17.14■□□□□ 0.33
CACNA1D-213ENST00000636595 PRAMEF22A3QJZ6 481 aa17.14■□□□□ 0.33
CACNA1D-213ENST00000636595 ERICH6BQ5W0A0 696 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms