RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 ZFYP08048 801 aaPredicted RBP6.95□□□□□ -1.3
SCN1A-212ENST00000636194 PRKCSHP14314 528 aaPredicted RBP6.95□□□□□ -1.3
SCN1A-212ENST00000636194 CASTP20810 708 aaKnown RBP6.95□□□□□ -1.3
SCN1A-212ENST00000636194 CHMP4BP1P59074 171 aa6.95□□□□□ -1.3
SCN1A-212ENST00000636194 CALCOCO2Q13137 446 aa6.95□□□□□ -1.3
SCN1A-212ENST00000636194 IFI16Q16666 785 aaKnown RBP6.95□□□□□ -1.3
SCN1A-212ENST00000636194 ZSCAN31Q96LW9 406 aaPredicted RBP6.95□□□□□ -1.3
SCN1A-212ENST00000636194 MGEA5O60502 916 aa6.95□□□□□ -1.3
SCN1A-212ENST00000636194 ARID4AP29374 1257 aaPredicted RBP6.95□□□□□ -1.3
SCN1A-212ENST00000636194 ZMAT2Q96NC0 199 aaKnown RBP6.95□□□□□ -1.3
SCN1A-212ENST00000636194 CNNM1Q9NRU3 951 aa6.95□□□□□ -1.3
SCN1A-212ENST00000636194 CCDC178Q5BJE1 867 aa6.95□□□□□ -1.3
SCN1A-212ENST00000636194 ZC4H2Q9NQZ6 224 aa6.95□□□□□ -1.3
SCN1A-212ENST00000636194 ERCC6LQ2NKX8 1250 aa6.95□□□□□ -1.3
SCN1A-212ENST00000636194 SPECC1Q5M775 1068 aa6.95□□□□□ -1.3
SCN1A-212ENST00000636194 TTC39AQ5SRH9 613 aa6.95□□□□□ -1.3
SCN1A-212ENST00000636194 TBC1D31Q96DN5 1066 aa6.95□□□□□ -1.3
SCN1A-212ENST00000636194 A0A1W2PRG0 241 aa6.95□□□□□ -1.3
SCN1A-212ENST00000636194 AEBP1Q8IUX7 1158 aa6.95□□□□□ -1.3
SCN1A-212ENST00000636194 SLF2Q8IX21 1173 aa6.95□□□□□ -1.3
SCN1A-212ENST00000636194 BANK1Q8NDB2 785 aa6.95□□□□□ -1.3
SCN1A-212ENST00000636194 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.95□□□□□ -1.3
SCN1A-212ENST00000636194 KIF15Q9NS87 1388 aa6.95□□□□□ -1.3
SCN1A-212ENST00000636194 TACC1O75410 805 aa6.95□□□□□ -1.3
SCN1A-212ENST00000636194 TAF12Q16514 161 aa6.95□□□□□ -1.3
SCN1A-212ENST00000636194 TMEM266Q2M3C6 531 aa6.95□□□□□ -1.3
SCN1A-212ENST00000636194 CACNA2D4Q7Z3S7 1137 aa6.95□□□□□ -1.3
SCN1A-212ENST00000636194 C16orf71Q8IYS4 520 aaPredicted RBP6.95□□□□□ -1.3
SCN1A-212ENST00000636194 GPATCH11Q8N954 259 aa6.95□□□□□ -1.3
SCN1A-212ENST00000636194 MPHOSPH8Q99549 860 aa6.95□□□□□ -1.3
SCN1A-212ENST00000636194 PHAXQ9H814 394 aaKnown RBP6.95□□□□□ -1.3
SCN1A-212ENST00000636194 TTC14Q96N46 770 aa6.94□□□□□ -1.3
SCN1A-212ENST00000636194 CEP164Q9UPV0 1460 aa6.94□□□□□ -1.3
SCN1A-212ENST00000636194 ATP2A1O14983 1001 aa6.94□□□□□ -1.3
SCN1A-212ENST00000636194 CLUAP1Q96AJ1 413 aa6.94□□□□□ -1.3
SCN1A-212ENST00000636194 UBAC1Q9BSL1 405 aa6.94□□□□□ -1.3
SCN1A-212ENST00000636194 TSPY26PQ9H489 355 aa6.94□□□□□ -1.3
SCN1A-212ENST00000636194 MYH11P35749 1972 aa6.94□□□□□ -1.3
SCN1A-212ENST00000636194 NLRP13Q86W25 1043 aa6.94□□□□□ -1.3
SCN1A-212ENST00000636194 FMNL2Q96PY5 1086 aa6.94□□□□□ -1.3
SCN1A-212ENST00000636194 B4DLN1 442 aa6.94□□□□□ -1.3
SCN1A-212ENST00000636194 ME1P48163 572 aa6.94□□□□□ -1.3
SCN1A-212ENST00000636194 MRPL12P52815 198 aaKnown RBP6.94□□□□□ -1.3
SCN1A-212ENST00000636194 SH2D4BQ5SQS7 431 aa6.94□□□□□ -1.3
SCN1A-212ENST00000636194 FSD1Q9BTV5 496 aa6.94□□□□□ -1.3
SCN1A-212ENST00000636194 ANKRD30AQ9BXX3 1397 aa6.94□□□□□ -1.3
SCN1A-212ENST00000636194 ZNF853P0CG23 659 aa6.94□□□□□ -1.3
SCN1A-212ENST00000636194 ALDH3A1P30838 453 aa6.94□□□□□ -1.3
SCN1A-212ENST00000636194 MXRA7P84157 204 aa6.94□□□□□ -1.3
SCN1A-212ENST00000636194 TXNDC16Q9P2K2 825 aa6.94□□□□□ -1.3
SCN1A-212ENST00000636194 JAKMIP2Q96AA8 810 aa6.94□□□□□ -1.3
SCN1A-212ENST00000636194 DACT3Q96B18 629 aaPredicted RBP6.94□□□□□ -1.3
SCN1A-212ENST00000636194 UBTFL1P0CB47 393 aaPredicted RBP6.94□□□□□ -1.3
SCN1A-212ENST00000636194 PAFAH1B1P43034 410 aa6.94□□□□□ -1.3
SCN1A-212ENST00000636194 ZCRB1Q8TBF4 217 aaKnown RBP6.94□□□□□ -1.3
SCN1A-212ENST00000636194 CCT6BQ92526 530 aa6.94□□□□□ -1.3
SCN1A-212ENST00000636194 POTEB2H3BUK9 544 aa6.93□□□□□ -1.3
SCN1A-212ENST00000636194 RFC1P35251 1148 aaPredicted RBP6.93□□□□□ -1.3
SCN1A-212ENST00000636194 AIMP1Q12904 312 aaKnown RBP6.93□□□□□ -1.3
SCN1A-212ENST00000636194 RNF168Q8IYW5 571 aaPredicted RBP6.93□□□□□ -1.3
SCN1A-212ENST00000636194 ZSCAN12O43309 604 aa6.93□□□□□ -1.3
SCN1A-212ENST00000636194 PRPHP41219 470 aa6.93□□□□□ -1.3
SCN1A-212ENST00000636194 AFAP1L2Q8N4X5 818 aa6.93□□□□□ -1.3
SCN1A-212ENST00000636194 CCDC155Q8N6L0 562 aa6.93□□□□□ -1.3
SCN1A-212ENST00000636194 UBXN4Q92575 508 aa6.93□□□□□ -1.3
SCN1A-212ENST00000636194 PFDN4Q9NQP4 134 aa6.93□□□□□ -1.3
SCN1A-212ENST00000636194 GIMAP4Q9NUV9 329 aa6.93□□□□□ -1.3
SCN1A-212ENST00000636194 MSANTD4Q8NCY6 345 aa6.93□□□□□ -1.3
SCN1A-212ENST00000636194 CEP83Q9Y592 693 aa6.93□□□□□ -1.3
SCN1A-212ENST00000636194 GTF2F1P35269 517 aaKnown RBP eCLIP6.93□□□□□ -1.3
SCN1A-212ENST00000636194 IPO4Q8TEX9 1081 aaKnown RBP6.93□□□□□ -1.3
SCN1A-212ENST00000636194 VCXQ9H320 206 aa6.93□□□□□ -1.3
SCN1A-212ENST00000636194 ATP2A2P16615 1042 aaKnown RBP6.93□□□□□ -1.3
SCN1A-212ENST00000636194 ATP2B1P20020 1258 aa6.93□□□□□ -1.3
SCN1A-212ENST00000636194 CCDC129Q6ZRS4 1044 aa6.93□□□□□ -1.3
SCN1A-212ENST00000636194 HAUS7Q99871 368 aa6.93□□□□□ -1.3
SCN1A-212ENST00000636194 ANKFY1Q9P2R3 1169 aa6.93□□□□□ -1.3
SCN1A-212ENST00000636194 TNMDQ9H2S6 317 aa6.92□□□□□ -1.3
SCN1A-212ENST00000636194 KMT5BQ4FZB7 885 aa6.92□□□□□ -1.3
SCN1A-212ENST00000636194 GSDMBQ8TAX9 411 aa6.92□□□□□ -1.3
SCN1A-212ENST00000636194 ATP2A3Q93084 1043 aa6.92□□□□□ -1.3
SCN1A-212ENST00000636194 SRCIN1Q9C0H9 1055 aa6.92□□□□□ -1.3
SCN1A-212ENST00000636194 RASAL2Q9UJF2 1139 aa6.92□□□□□ -1.3
SCN1A-212ENST00000636194 GIPC1O14908 333 aa6.92□□□□□ -1.3
SCN1A-212ENST00000636194 CRCPO75575 148 aa6.92□□□□□ -1.3
SCN1A-212ENST00000636194 SSFA2P28290 1259 aa6.92□□□□□ -1.3
SCN1A-212ENST00000636194 CTNNA3Q9UI47 895 aa6.92□□□□□ -1.3
SCN1A-212ENST00000636194 MYO18AQ92614 2054 aaKnown RBP6.92□□□□□ -1.3
SCN1A-212ENST00000636194 EIF3DO15371 548 aaKnown RBP eCLIP6.92□□□□□ -1.33e-6■■□□□ 11.9
SCN1A-212ENST00000636194 CKAP4Q07065 602 aaKnown RBP6.92□□□□□ -1.3
SCN1A-212ENST00000636194 STMN2Q93045 179 aa6.92□□□□□ -1.3
SCN1A-212ENST00000636194 ZFYVE1Q9HBF4 777 aa6.92□□□□□ -1.3
SCN1A-212ENST00000636194 MYH9P35579 1960 aaKnown RBP6.92□□□□□ -1.3
SCN1A-212ENST00000636194 CCDC196A0A1B0GTZ2 297 aa6.92□□□□□ -1.3
SCN1A-212ENST00000636194 FILIP1Q7Z7B0 1213 aa6.92□□□□□ -1.3
SCN1A-212ENST00000636194 EHBP1Q8NDI1 1231 aa6.92□□□□□ -1.3
SCN1A-212ENST00000636194 ZNF652Q9Y2D9 606 aa6.92□□□□□ -1.3
SCN1A-212ENST00000636194 GPRASP1Q5JY77 1395 aa6.92□□□□□ -1.3
SCN1A-212ENST00000636194 HSPA4P34932 840 aa6.92□□□□□ -1.3
SCN1A-212ENST00000636194 DNAJC21Q5F1R6 531 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms