RNA–Protein interactions for RNA: ENST00000636102.1

ARHGEF9-223, Transcript of Cdc42 guanine nucleotide exchange factor 9, human

TSL 5

Gene ARHGEF9, Length 2,112 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF9-223	ENST00000636102	LGR6	Q9HBX8	967 aa		13.36	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	CHL1	O00533	1208 aa		13.35	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	FTSJ3	Q8IY81	847 aa	Known RBP	13.35	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	UPF2	Q9HAU5	1272 aa	Known RBP	13.35	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	COL5A2	P05997	1499 aa	Predicted RBP	13.35	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	MAP3K5	Q99683	1374 aa		13.35	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	COL16A1	Q07092	1604 aa	Predicted RBP	13.35	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	ESPN	B1AK53	854 aa		13.34	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	IPO8	O15397	1037 aa	Known RBP	13.34	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	AKAP4	Q5JQC9	854 aa		13.34	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	CARD10	Q9BWT7	1032 aa		13.34	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	DDX19B	Q9UMR2	479 aa		13.34	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	CRB1	P82279	1406 aa		13.34	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	ABCC6	O95255	1503 aa		13.34	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	MPRIP	Q6WCQ1	1025 aa		13.34	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	CHMP4B	Q9H444	224 aa	Known RBP	13.34	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	PHLPP1	O60346	1717 aa		13.34	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	ELL2	O00472	640 aa	Predicted RBP	13.33	□□□□□ -0.28
ARHGEF9-223	ENST00000636102	ALDH1L2	Q3SY69	923 aa		13.33	□□□□□ -0.28
ARHGEF9-223	ENST00000636102	C1orf141	Q5JVX7	400 aa		13.33	□□□□□ -0.28
ARHGEF9-223	ENST00000636102	KIF16B	Q96L93	1317 aa		13.33	□□□□□ -0.28
ARHGEF9-223	ENST00000636102	HSPA1L	P34931	641 aa		13.33	□□□□□ -0.28
ARHGEF9-223	ENST00000636102	TSPYL6	Q8N831	410 aa		13.33	□□□□□ -0.28
ARHGEF9-223	ENST00000636102	BRPF1	P55201	1214 aa	Predicted RBP	13.32	□□□□□ -0.28
ARHGEF9-223	ENST00000636102	C8orf58	Q8NAV2	365 aa		13.32	□□□□□ -0.28
ARHGEF9-223	ENST00000636102	BCL2L13	Q9BXK5	485 aa		13.32	□□□□□ -0.28
ARHGEF9-223	ENST00000636102	SMC4	Q9NTJ3	1288 aa		13.32	□□□□□ -0.28
ARHGEF9-223	ENST00000636102	SPG7	Q9UQ90	795 aa		13.32	□□□□□ -0.28
ARHGEF9-223	ENST00000636102	RGPD5	Q99666	1765 aa		13.32	□□□□□ -0.28
ARHGEF9-223	ENST00000636102	RLBP1	P12271	317 aa		13.31	□□□□□ -0.28
ARHGEF9-223	ENST00000636102	HDAC1	Q13547	482 aa	Predicted RBP	13.31	□□□□□ -0.28
ARHGEF9-223	ENST00000636102	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.31	□□□□□ -0.28
ARHGEF9-223	ENST00000636102	PCDHB15	Q9Y5E8	787 aa		13.31	□□□□□ -0.28
ARHGEF9-223	ENST00000636102	MEGF6	O75095	1541 aa		13.31	□□□□□ -0.28
ARHGEF9-223	ENST00000636102	LMO7	Q8WWI1	1683 aa		13.31	□□□□□ -0.28
ARHGEF9-223	ENST00000636102	RGPD2	P0DJD1	1756 aa		13.31	□□□□□ -0.28
ARHGEF9-223	ENST00000636102	JCAD	Q9P266	1359 aa		13.31	□□□□□ -0.28
ARHGEF9-223	ENST00000636102	MCM4	P33991	863 aa		13.31	□□□□□ -0.28
ARHGEF9-223	ENST00000636102	TAF7	Q15545	349 aa	Predicted RBP	13.31	□□□□□ -0.28
ARHGEF9-223	ENST00000636102	KRT24	Q2M2I5	525 aa		13.31	□□□□□ -0.28
ARHGEF9-223	ENST00000636102	ATF7IP	Q6VMQ6	1270 aa		13.31	□□□□□ -0.28
ARHGEF9-223	ENST00000636102	ABCA3	Q99758	1704 aa		13.3	□□□□□ -0.28
ARHGEF9-223	ENST00000636102	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.3	□□□□□ -0.28
ARHGEF9-223	ENST00000636102	RNMT	O43148	476 aa	Known RBP	13.3	□□□□□ -0.28
ARHGEF9-223	ENST00000636102	VAMP4	O75379	141 aa		13.3	□□□□□ -0.28
ARHGEF9-223	ENST00000636102	PANK2	Q9BZ23	570 aa		13.3	□□□□□ -0.28
ARHGEF9-223	ENST00000636102	TSPYL4	Q9UJ04	414 aa		13.3	□□□□□ -0.28
ARHGEF9-223	ENST00000636102	CYP27B1	O15528	508 aa		13.3	□□□□□ -0.28
ARHGEF9-223	ENST00000636102	IL2RB	P14784	551 aa		13.3	□□□□□ -0.28
ARHGEF9-223	ENST00000636102	PHKG2	P15735	406 aa		13.3	□□□□□ -0.28
ARHGEF9-223	ENST00000636102	TERF1	P54274	439 aa		13.3	□□□□□ -0.28
ARHGEF9-223	ENST00000636102	CEMIP	Q8WUJ3	1361 aa		13.29	□□□□□ -0.28
ARHGEF9-223	ENST00000636102	ZCRB1	Q8TBF4	217 aa	Known RBP	13.29	□□□□□ -0.28
ARHGEF9-223	ENST00000636102	SSH1	Q8WYL5	1049 aa		13.29	□□□□□ -0.28
ARHGEF9-223	ENST00000636102	SLK	Q9H2G2	1235 aa	Predicted RBP	13.29	□□□□□ -0.28
ARHGEF9-223	ENST00000636102	PDZRN3	Q9UPQ7	1066 aa		13.29	□□□□□ -0.28
ARHGEF9-223	ENST00000636102	TWISTNB	Q3B726	338 aa	Predicted RBP	13.28	□□□□□ -0.28
ARHGEF9-223	ENST00000636102	IFNL2	Q8IZJ0	200 aa		13.28	□□□□□ -0.28
ARHGEF9-223	ENST00000636102	MAP7D2	Q96T17	732 aa		13.28	□□□□□ -0.28
ARHGEF9-223	ENST00000636102	TEF	Q10587	303 aa		13.28	□□□□□ -0.28
ARHGEF9-223	ENST00000636102	GRPEL1	Q9HAV7	217 aa		13.28	□□□□□ -0.28
ARHGEF9-223	ENST00000636102	PRDM4	Q9UKN5	801 aa		13.28	□□□□□ -0.28
ARHGEF9-223	ENST00000636102	FAM208A	Q9UK61	1670 aa	Known RBP	13.27	□□□□□ -0.28
ARHGEF9-223	ENST00000636102	NGLY1	Q96IV0	654 aa		13.27	□□□□□ -0.28
ARHGEF9-223	ENST00000636102	C8orf37	Q96NL8	207 aa		13.27	□□□□□ -0.28
ARHGEF9-223	ENST00000636102	TRIM27	P14373	513 aa		13.27	□□□□□ -0.29
ARHGEF9-223	ENST00000636102	DDX54	Q8TDD1	881 aa	Known RBP	13.27	□□□□□ -0.29
ARHGEF9-223	ENST00000636102	ARHGAP45	Q92619	1136 aa		13.27	□□□□□ -0.29
ARHGEF9-223	ENST00000636102	OVOS2	A0A0G2JMS6	1433 aa		13.27	□□□□□ -0.29
ARHGEF9-223	ENST00000636102	DLG5	Q8TDM6	1919 aa		13.26	□□□□□ -0.29
ARHGEF9-223	ENST00000636102	BTBD11	A6QL63	1104 aa		13.25	□□□□□ -0.29
ARHGEF9-223	ENST00000636102	KCNQ3	O43525	872 aa		13.25	□□□□□ -0.29
ARHGEF9-223	ENST00000636102	TRAK2	O60296	914 aa		13.25	□□□□□ -0.29
ARHGEF9-223	ENST00000636102	SPATA31A6	Q5VVP1	1343 aa		13.25	□□□□□ -0.29
ARHGEF9-223	ENST00000636102	DDX11L8	A8MPP1	907 aa		13.25	□□□□□ -0.29
ARHGEF9-223	ENST00000636102	SMC5	Q8IY18	1101 aa		13.25	□□□□□ -0.29
ARHGEF9-223	ENST00000636102	TRIM44	Q96DX7	344 aa	Predicted RBP	13.25	□□□□□ -0.29
ARHGEF9-223	ENST00000636102	TBC1D32	Q96NH3	1257 aa		13.25	□□□□□ -0.29
ARHGEF9-223	ENST00000636102	BABAM1	Q9NWV8	329 aa		13.25	□□□□□ -0.29
ARHGEF9-223	ENST00000636102	TNN	Q9UQP3	1299 aa		13.25	□□□□□ -0.29
ARHGEF9-223	ENST00000636102	ERBB4	Q15303	1308 aa		13.24	□□□□□ -0.29
ARHGEF9-223	ENST00000636102	NFATC2IP	Q8NCF5	419 aa		13.24	□□□□□ -0.29
ARHGEF9-223	ENST00000636102	DCAF5	Q96JK2	942 aa		13.24	□□□□□ -0.29
ARHGEF9-223	ENST00000636102	TBC1D2	Q9BYX2	928 aa		13.24	□□□□□ -0.29
ARHGEF9-223	ENST00000636102	CHMP5	Q9NZZ3	219 aa		13.24	□□□□□ -0.29
ARHGEF9-223	ENST00000636102	NOB1	Q9ULX3	412 aa	Known RBP	13.24	□□□□□ -0.29
ARHGEF9-223	ENST00000636102	COL14A1	Q05707	1796 aa	Known RBP	13.24	□□□□□ -0.29
ARHGEF9-223	ENST00000636102	ITPRIP	Q8IWB1	547 aa		13.24	□□□□□ -0.29
ARHGEF9-223	ENST00000636102	CCDC9	Q9Y3X0	531 aa	Known RBP	13.24	□□□□□ -0.29
ARHGEF9-223	ENST00000636102	PLEKHG2	Q9H7P9	1386 aa		13.24	□□□□□ -0.29
ARHGEF9-223	ENST00000636102	SPATA31A1	Q5TZJ5	1347 aa		13.23	□□□□□ -0.29
ARHGEF9-223	ENST00000636102	UNC5CL	Q8IV45	518 aa		13.23	□□□□□ -0.29
ARHGEF9-223	ENST00000636102	MRPL50	Q8N5N7	158 aa	Known RBP	13.23	□□□□□ -0.29
ARHGEF9-223	ENST00000636102	SLC52A2	Q9HAB3	445 aa		13.23	□□□□□ -0.29
ARHGEF9-223	ENST00000636102	ZBTB40	Q9NUA8	1239 aa		13.23	□□□□□ -0.29
ARHGEF9-223	ENST00000636102	KDM6A	O15550	1401 aa	Predicted RBP	13.23	□□□□□ -0.29
ARHGEF9-223	ENST00000636102	PCDH11X	Q9BZA7	1347 aa		13.23	□□□□□ -0.29
ARHGEF9-223	ENST00000636102	PCDH11Y	Q9BZA8	1340 aa		13.23	□□□□□ -0.29
ARHGEF9-223	ENST00000636102	SEC24B	O95487	1268 aa		13.22	□□□□□ -0.29
ARHGEF9-223	ENST00000636102	HSP90AB1	P08238	724 aa	Known RBP	13.22	□□□□□ -0.29

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