RNA–Protein interactions for RNA: ENST00000635915.1

CLN5-206, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 2,517 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-206ENST00000635915 RAPGEF4Q8WZA2 1011 aa22.6■■□□□ 1.21
CLN5-206ENST00000635915 SEC24BO95487 1268 aa22.59■■□□□ 1.21
CLN5-206ENST00000635915 HDGFL1Q5TGJ6 251 aa22.59■■□□□ 1.21
CLN5-206ENST00000635915 VIRMAQ69YN4 1812 aaKnown RBP22.59■■□□□ 1.21
CLN5-206ENST00000635915 EIF2S2P20042 333 aaKnown RBP22.59■■□□□ 1.21
CLN5-206ENST00000635915 NUCB1Q02818 461 aa22.59■■□□□ 1.21
CLN5-206ENST00000635915 FKBP5Q13451 457 aaPredicted RBP22.59■■□□□ 1.21
CLN5-206ENST00000635915 NOP58Q9Y2X3 529 aaKnown RBP22.57■■□□□ 1.2
CLN5-206ENST00000635915 SOS2Q07890 1332 aaPredicted RBP22.57■■□□□ 1.2
CLN5-206ENST00000635915 MEGF6O75095 1541 aa22.57■■□□□ 1.2
CLN5-206ENST00000635915 ANKRD45Q5TZF3 282 aa22.56■■□□□ 1.2
CLN5-206ENST00000635915 ERICH6Q7L0X2 663 aa22.56■■□□□ 1.2
CLN5-206ENST00000635915 KDM3BQ7LBC6 1761 aa22.56■■□□□ 1.2
CLN5-206ENST00000635915 CHD1LQ86WJ1 897 aa22.56■■□□□ 1.2
CLN5-206ENST00000635915 PHAXQ9H814 394 aaKnown RBP22.56■■□□□ 1.2
CLN5-206ENST00000635915 CPDO75976 1380 aa22.55■■□□□ 1.2
CLN5-206ENST00000635915 TATP17735 454 aaPredicted RBP22.54■■□□□ 1.2
CLN5-206ENST00000635915 PRDM11Q9NQV5 511 aa22.54■■□□□ 1.2
CLN5-206ENST00000635915 ATP10DQ9P241 1426 aa22.54■■□□□ 1.2
CLN5-206ENST00000635915 SOS1Q07889 1333 aaPredicted RBP22.53■■□□□ 1.2
CLN5-206ENST00000635915 GCC1Q96CN9 775 aa22.53■■□□□ 1.2
CLN5-206ENST00000635915 BCL11AQ9H165 835 aa22.53■■□□□ 1.2
CLN5-206ENST00000635915 ANXA1P04083 346 aa22.53■■□□□ 1.2
CLN5-206ENST00000635915 ZBTB47Q9UFB7 747 aaPredicted RBP22.53■■□□□ 1.2
CLN5-206ENST00000635915 CCT4P50991 539 aaKnown RBP22.52■■□□□ 1.2
CLN5-206ENST00000635915 CHPF2Q9P2E5 772 aa22.52■■□□□ 1.2
CLN5-206ENST00000635915 CEP85Q6P2H3 762 aa22.52■■□□□ 1.19
CLN5-206ENST00000635915 CACNA1FO60840 1977 aa22.51■■□□□ 1.19
CLN5-206ENST00000635915 PRAMEF22A3QJZ6 481 aa22.51■■□□□ 1.19
CLN5-206ENST00000635915 ANKRD44Q8N8A2 993 aa22.51■■□□□ 1.19
CLN5-206ENST00000635915 PHKG2P15735 406 aa22.5■■□□□ 1.19
CLN5-206ENST00000635915 SPG7Q9UQ90 795 aa22.5■■□□□ 1.19
CLN5-206ENST00000635915 KDM6AO15550 1401 aaPredicted RBP22.5■■□□□ 1.19
CLN5-206ENST00000635915 OVOS2A0A0G2JMS6 1433 aa22.49■■□□□ 1.19
CLN5-206ENST00000635915 MYT1Q01538 1121 aa22.49■■□□□ 1.19
CLN5-206ENST00000635915 CYP27B1O15528 508 aa22.48■■□□□ 1.19
CLN5-206ENST00000635915 SLC39A6Q13433 755 aa22.48■■□□□ 1.19
CLN5-206ENST00000635915 HOXB7P09629 217 aa22.47■■□□□ 1.19
CLN5-206ENST00000635915 DCTPP1Q9H773 170 aa22.47■■□□□ 1.19
CLN5-206ENST00000635915 SIPA1L3O60292 1781 aaPredicted RBP22.47■■□□□ 1.19
CLN5-206ENST00000635915 GIGYF1O75420 1035 aaPredicted RBP22.47■■□□□ 1.19
CLN5-206ENST00000635915 RPAP2Q8IXW5 612 aaPredicted RBP22.47■■□□□ 1.19
CLN5-206ENST00000635915 NFATC2IPQ8NCF5 419 aa22.47■■□□□ 1.19
CLN5-206ENST00000635915 ABCC6O95255 1503 aa22.46■■□□□ 1.19
CLN5-206ENST00000635915 APBB1O00213 710 aa22.46■■□□□ 1.19
CLN5-206ENST00000635915 ADAMTS7Q9UKP4 1686 aa22.45■■□□□ 1.19
CLN5-206ENST00000635915 TOM1L2Q6ZVM7 507 aa22.45■■□□□ 1.18
CLN5-206ENST00000635915 IFNL2Q8IZJ0 200 aa22.45■■□□□ 1.18
CLN5-206ENST00000635915 SLC52A2Q9HAB3 445 aa22.45■■□□□ 1.18
CLN5-206ENST00000635915 PROSER3Q2NL68 480 aa22.45■■□□□ 1.18
CLN5-206ENST00000635915 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.45■■□□□ 1.18
CLN5-206ENST00000635915 WDR17Q8IZU2 1322 aa22.44■■□□□ 1.18
CLN5-206ENST00000635915 SCN11AQ9UI33 1791 aa22.44■■□□□ 1.18
CLN5-206ENST00000635915 SLC4A3P48751 1232 aa22.43■■□□□ 1.18
CLN5-206ENST00000635915 STRN4Q9NRL3 753 aa22.43■■□□□ 1.18
CLN5-206ENST00000635915 HEG1Q9ULI3 1381 aa22.43■■□□□ 1.18
CLN5-206ENST00000635915 PI4KAP2A4QPH2 592 aa22.42■■□□□ 1.18
CLN5-206ENST00000635915 GNAI2P04899 355 aa22.42■■□□□ 1.18
CLN5-206ENST00000635915 ZNF790Q6PG37 636 aa22.42■■□□□ 1.18
CLN5-206ENST00000635915 PI4KAP1Q8N8J0 262 aa22.42■■□□□ 1.18
CLN5-206ENST00000635915 ABCA3Q99758 1704 aa22.42■■□□□ 1.18
CLN5-206ENST00000635915 COL5A2P05997 1499 aaPredicted RBP22.42■■□□□ 1.18
CLN5-206ENST00000635915 C16orf71Q8IYS4 520 aaPredicted RBP22.41■■□□□ 1.18
CLN5-206ENST00000635915 NHSL1Q5SYE7 1610 aa22.41■■□□□ 1.18
CLN5-206ENST00000635915 USP44Q9H0E7 712 aa22.41■■□□□ 1.18
CLN5-206ENST00000635915 SMARCA5O60264 1052 aaPredicted RBP22.4■■□□□ 1.18
CLN5-206ENST00000635915 DDRGK1Q96HY6 314 aa22.4■■□□□ 1.18
CLN5-206ENST00000635915 DBF4Q9UBU7 674 aaPredicted RBP22.4■■□□□ 1.18
CLN5-206ENST00000635915 LARP1Q6PKG0 1096 aaKnown RBP22.39■■□□□ 1.18
CLN5-206ENST00000635915 DCAF5Q96JK2 942 aa22.39■■□□□ 1.18
CLN5-206ENST00000635915 PKD1L3Q7Z443 1732 aa22.39■■□□□ 1.17
CLN5-206ENST00000635915 GNAI3P08754 354 aa22.39■■□□□ 1.17
CLN5-206ENST00000635915 OTUD7AQ8TE49 926 aaPredicted RBP22.39■■□□□ 1.17
CLN5-206ENST00000635915 LRRFIP2Q9Y608 721 aaKnown RBP22.39■■□□□ 1.17
CLN5-206ENST00000635915 PXDNLA1KZ92 1463 aa22.38■■□□□ 1.17
CLN5-206ENST00000635915 DNAAF4Q8WXU2 420 aa22.38■■□□□ 1.17
CLN5-206ENST00000635915 ADCY9O60503 1353 aa22.38■■□□□ 1.17
CLN5-206ENST00000635915 PNMA6EA0A0J9YXQ4 647 aa22.37■■□□□ 1.17
CLN5-206ENST00000635915 SRCIN1Q9C0H9 1055 aa22.37■■□□□ 1.17
CLN5-206ENST00000635915 MFAP1P55081 439 aaKnown RBP22.37■■□□□ 1.17
CLN5-206ENST00000635915 ZNF496Q96IT1 587 aaPredicted RBP22.37■■□□□ 1.17
CLN5-206ENST00000635915 PLEKHM2Q8IWE5 1019 aa22.36■■□□□ 1.17
CLN5-206ENST00000635915 CHMP4AQ9BY43 222 aa22.36■■□□□ 1.17
CLN5-206ENST00000635915 USP35Q9P2H5 1018 aa22.36■■□□□ 1.17
CLN5-206ENST00000635915 N4BP2Q86UW6 1770 aaPredicted RBP22.36■■□□□ 1.17
CLN5-206ENST00000635915 HMMRO75330 724 aa22.36■■□□□ 1.17
CLN5-206ENST00000635915 EVA1CP58658 441 aa22.36■■□□□ 1.17
CLN5-206ENST00000635915 BMP2KLQ5H9B9 411 aa22.36■■□□□ 1.17
CLN5-206ENST00000635915 EXOC6BQ9Y2D4 811 aa22.36■■□□□ 1.17
CLN5-206ENST00000635915 UBTFL1P0CB47 393 aaPredicted RBP22.35■■□□□ 1.17
CLN5-206ENST00000635915 BEND3Q5T5X7 828 aa22.35■■□□□ 1.17
CLN5-206ENST00000635915 UPF2Q9HAU5 1272 aaKnown RBP22.35■■□□□ 1.17
CLN5-206ENST00000635915 ZCRB1Q8TBF4 217 aaKnown RBP22.35■■□□□ 1.17
CLN5-206ENST00000635915 TBC1D32Q96NH3 1257 aa22.34■■□□□ 1.17
CLN5-206ENST00000635915 NBPF7P0C2Y1 421 aaPredicted RBP22.34■■□□□ 1.17
CLN5-206ENST00000635915 CABP4P57796 275 aa22.34■■□□□ 1.17
CLN5-206ENST00000635915 MAP3K2Q9Y2U5 619 aa22.34■■□□□ 1.17
CLN5-206ENST00000635915 C5P01031 1676 aa22.34■■□□□ 1.17
CLN5-206ENST00000635915 AIMP1Q12904 312 aaKnown RBP22.33■■□□□ 1.17
CLN5-206ENST00000635915 PDIA6Q15084 440 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms