RNA–Protein interactions for RNA: ENST00000635856.1

CHD2-221, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-221ENST00000635856 LCMT1Q9UIC8 334 aa7.16□□□□□ -1.26
CHD2-221ENST00000635856 PLEKHG2Q9H7P9 1386 aa7.16□□□□□ -1.26
CHD2-221ENST00000635856 KDM4AO75164 1064 aa7.16□□□□□ -1.26
CHD2-221ENST00000635856 GCFC2P16383 781 aaKnown RBP7.16□□□□□ -1.26
CHD2-221ENST00000635856 ZC3H12AQ5D1E8 599 aaKnown RBP7.16□□□□□ -1.26
CHD2-221ENST00000635856 SMARCE1Q969G3 411 aa7.16□□□□□ -1.26
CHD2-221ENST00000635856 JPH2Q9BR39 696 aaPredicted RBP7.16□□□□□ -1.26
CHD2-221ENST00000635856 CLIP2Q9UDT6 1046 aa7.16□□□□□ -1.26
CHD2-221ENST00000635856 NCOA1Q15788 1441 aa7.16□□□□□ -1.26
CHD2-221ENST00000635856 EZRP15311 586 aaKnown RBP7.16□□□□□ -1.26
CHD2-221ENST00000635856 NAA25Q14CX7 972 aa7.16□□□□□ -1.26
CHD2-221ENST00000635856 POTEDQ86YR6 584 aa7.16□□□□□ -1.26
CHD2-221ENST00000635856 STAG1Q8WVM7 1258 aa7.16□□□□□ -1.26
CHD2-221ENST00000635856 ZMYM3Q14202 1370 aa7.16□□□□□ -1.26
CHD2-221ENST00000635856 GBP2P32456 591 aaPredicted RBP7.16□□□□□ -1.26
CHD2-221ENST00000635856 MCM6Q14566 821 aa7.16□□□□□ -1.26
CHD2-221ENST00000635856 HDGFL1Q5TGJ6 251 aa7.16□□□□□ -1.26
CHD2-221ENST00000635856 NUP133Q8WUM0 1156 aa7.16□□□□□ -1.26
CHD2-221ENST00000635856 ZNF446Q9NWS9 450 aa7.16□□□□□ -1.26
CHD2-221ENST00000635856 ZNF215Q9UL58 517 aaPredicted RBP7.16□□□□□ -1.26
CHD2-221ENST00000635856 PDE3AQ14432 1141 aa7.15□□□□□ -1.26
CHD2-221ENST00000635856 C11orf91Q3C1V1 193 aa7.15□□□□□ -1.26
CHD2-221ENST00000635856 ODF2LQ9ULJ1 636 aa7.15□□□□□ -1.26
CHD2-221ENST00000635856 SMC3Q9UQE7 1217 aa7.15□□□□□ -1.26
CHD2-221ENST00000635856 ABCA10Q8WWZ4 1543 aa7.15□□□□□ -1.26
CHD2-221ENST00000635856 PPFIA2O75334 1257 aa7.15□□□□□ -1.26
CHD2-221ENST00000635856 CDKL5O76039 1030 aa7.15□□□□□ -1.26
CHD2-221ENST00000635856 IGHDP01880 384 aa7.15□□□□□ -1.26
CHD2-221ENST00000635856 CCT2P78371 535 aaKnown RBP7.15□□□□□ -1.26
CHD2-221ENST00000635856 TRIM74Q86UV6 250 aa7.15□□□□□ -1.26
CHD2-221ENST00000635856 TRIM73Q86UV7 250 aa7.15□□□□□ -1.26
CHD2-221ENST00000635856 MIPOL1Q8TD10 442 aa7.15□□□□□ -1.26
CHD2-221ENST00000635856 ZNF692Q9BU19 519 aaPredicted RBP7.15□□□□□ -1.26
CHD2-221ENST00000635856 ANKRD18BA2A2Z9 1011 aa7.15□□□□□ -1.27
CHD2-221ENST00000635856 PNMA6AP0CW24 399 aaPredicted RBP7.15□□□□□ -1.27
CHD2-221ENST00000635856 CASTP20810 708 aaKnown RBP7.15□□□□□ -1.27
CHD2-221ENST00000635856 SMC1AQ14683 1233 aaKnown RBP7.15□□□□□ -1.27
CHD2-221ENST00000635856 CRYMQ14894 314 aa7.15□□□□□ -1.27
CHD2-221ENST00000635856 ARHGAP29Q52LW3 1261 aa7.15□□□□□ -1.27
CHD2-221ENST00000635856 FOXD4L5Q5VV16 416 aaPredicted RBP7.15□□□□□ -1.27
CHD2-221ENST00000635856 FOXD4L4Q8WXT5 416 aaPredicted RBP7.15□□□□□ -1.27
CHD2-221ENST00000635856 TEX13AQ9BXU3 409 aaPredicted RBP7.15□□□□□ -1.27
CHD2-221ENST00000635856 COG6Q9Y2V7 657 aa7.15□□□□□ -1.27
CHD2-221ENST00000635856 SNUPNO95149 360 aaKnown RBP7.14□□□□□ -1.27
CHD2-221ENST00000635856 CORO7P57737 925 aa7.14□□□□□ -1.27
CHD2-221ENST00000635856 CLEC17AQ6ZS10 378 aa7.14□□□□□ -1.27
CHD2-221ENST00000635856 TSPAN18Q96SJ8 248 aa7.14□□□□□ -1.27
CHD2-221ENST00000635856 IQCGQ9H095 443 aaKnown RBP7.14□□□□□ -1.27
CHD2-221ENST00000635856 PSD3Q9NYI0 1048 aa7.14□□□□□ -1.27
CHD2-221ENST00000635856 PYCARDQ9ULZ3 195 aa7.14□□□□□ -1.27
CHD2-221ENST00000635856 COQ9O75208 318 aa7.14□□□□□ -1.27
CHD2-221ENST00000635856 HOMER1Q86YM7 354 aa7.14□□□□□ -1.27
CHD2-221ENST00000635856 TRIM5Q9C035 493 aa7.14□□□□□ -1.27
CHD2-221ENST00000635856 ARFGAP3Q9NP61 516 aa7.14□□□□□ -1.27
CHD2-221ENST00000635856 SYNJ1O43426 1573 aa7.14□□□□□ -1.27
CHD2-221ENST00000635856 URB2Q14146 1524 aaKnown RBP7.14□□□□□ -1.27
CHD2-221ENST00000635856 NEMFO60524 1076 aa7.13□□□□□ -1.27
CHD2-221ENST00000635856 PRPHP41219 470 aa7.13□□□□□ -1.27
CHD2-221ENST00000635856 SKIDA1Q1XH10 827 aa7.13□□□□□ -1.27
CHD2-221ENST00000635856 PROCA1Q8NCQ7 364 aaPredicted RBP7.13□□□□□ -1.27
CHD2-221ENST00000635856 TMEM63CQ9P1W3 806 aa7.13□□□□□ -1.27
CHD2-221ENST00000635856 ROCK1Q13464 1354 aa7.13□□□□□ -1.27
CHD2-221ENST00000635856 PTPRGP23470 1445 aa7.13□□□□□ -1.27
CHD2-221ENST00000635856 NAA30Q147X3 362 aaPredicted RBP7.13□□□□□ -1.27
CHD2-221ENST00000635856 CCDC183Q5T5S1 534 aa7.13□□□□□ -1.27
CHD2-221ENST00000635856 TAX1BP1Q86VP1 789 aa7.13□□□□□ -1.27
CHD2-221ENST00000635856 SAAL1Q96ER3 474 aa7.13□□□□□ -1.27
CHD2-221ENST00000635856 CENPHQ9H3R5 247 aa7.13□□□□□ -1.27
CHD2-221ENST00000635856 IBSPP21815 317 aaPredicted RBP7.13□□□□□ -1.27
CHD2-221ENST00000635856 PEX19P40855 299 aa7.13□□□□□ -1.27
CHD2-221ENST00000635856 RBM6P78332 1123 aaKnown RBP7.13□□□□□ -1.27
CHD2-221ENST00000635856 EXOC8Q8IYI6 725 aa7.13□□□□□ -1.27
CHD2-221ENST00000635856 RSRC1Q96IZ7 334 aaKnown RBP7.13□□□□□ -1.27
CHD2-221ENST00000635856 GOLGA6CA6NDK9 693 aa7.12□□□□□ -1.27
CHD2-221ENST00000635856 GOLGA6BA6NDN3 693 aa7.12□□□□□ -1.27
CHD2-221ENST00000635856 EBAG9O00559 213 aa7.12□□□□□ -1.27
CHD2-221ENST00000635856 GOLGA6DP0CG33 693 aa7.12□□□□□ -1.27
CHD2-221ENST00000635856 GORABQ5T7V8 394 aa7.12□□□□□ -1.27
CHD2-221ENST00000635856 CCDC26Q8TAB7 109 aa7.12□□□□□ -1.27
CHD2-221ENST00000635856 GOLGA6AQ9NYA3 693 aa7.12□□□□□ -1.27
CHD2-221ENST00000635856 VPS18Q9P253 973 aa7.12□□□□□ -1.27
CHD2-221ENST00000635856 KIAA1107Q9UPP5 1409 aa7.12□□□□□ -1.27
CHD2-221ENST00000635856 SHTN1A0MZ66 631 aa7.12□□□□□ -1.27
CHD2-221ENST00000635856 IQUBQ8NA54 791 aa7.12□□□□□ -1.27
CHD2-221ENST00000635856 CABS1Q96KC9 395 aa7.12□□□□□ -1.27
CHD2-221ENST00000635856 PLEKHH2Q8IVE3 1493 aa7.12□□□□□ -1.27
CHD2-221ENST00000635856 MAGI1Q96QZ7 1491 aaPredicted RBP7.12□□□□□ -1.27
CHD2-221ENST00000635856 CHUKO15111 745 aa7.12□□□□□ -1.27
CHD2-221ENST00000635856 HCLS1P14317 486 aaPredicted RBP7.12□□□□□ -1.27
CHD2-221ENST00000635856 INPP5BP32019 993 aa7.12□□□□□ -1.27
CHD2-221ENST00000635856 ST5P78524 1137 aa7.12□□□□□ -1.27
CHD2-221ENST00000635856 STK11IPQ8N1F8 1099 aa7.12□□□□□ -1.27
CHD2-221ENST00000635856 INCENPQ9NQS7 918 aa7.12□□□□□ -1.27
CHD2-221ENST00000635856 ELP1O95163 1332 aa7.12□□□□□ -1.27
CHD2-221ENST00000635856 ERLIN1O75477 346 aa7.12□□□□□ -1.27
CHD2-221ENST00000635856 CCDC192P0DO97 292 aa7.12□□□□□ -1.27
CHD2-221ENST00000635856 ANKRD45Q5TZF3 282 aa7.12□□□□□ -1.27
CHD2-221ENST00000635856 HHATQ5VTY9 493 aa7.12□□□□□ -1.27
CHD2-221ENST00000635856 MICALCLQ6ZW33 695 aa7.12□□□□□ -1.27
CHD2-221ENST00000635856 ZCRB1Q8TBF4 217 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms