RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 HNRNPUQ00839 825 aaKnown RBP eCLIP11.24□□□□□ -0.61
CDKL5-209ENST00000635828 PROM2Q8N271 834 aa11.24□□□□□ -0.61
CDKL5-209ENST00000635828 SLC4A9Q96Q91 983 aa11.24□□□□□ -0.61
CDKL5-209ENST00000635828 SIPA1L3O60292 1781 aaPredicted RBP11.24□□□□□ -0.61
CDKL5-209ENST00000635828 WWC1Q8IX03 1113 aa11.24□□□□□ -0.61
CDKL5-209ENST00000635828 CEMIPQ8WUJ3 1361 aa11.24□□□□□ -0.61
CDKL5-209ENST00000635828 NHSQ6T4R5 1651 aa11.24□□□□□ -0.61
CDKL5-209ENST00000635828 PTCD1O75127 700 aaKnown RBP11.23□□□□□ -0.61
CDKL5-209ENST00000635828 TSR2Q969E8 191 aaKnown RBP11.23□□□□□ -0.61
CDKL5-209ENST00000635828 SLC52A2Q9HAB3 445 aa11.23□□□□□ -0.61
CDKL5-209ENST00000635828 APBA3O96018 575 aa11.23□□□□□ -0.61
CDKL5-209ENST00000635828 CABP4P57796 275 aa11.23□□□□□ -0.61
CDKL5-209ENST00000635828 BCL9O00512 1426 aa11.23□□□□□ -0.61
CDKL5-209ENST00000635828 ATG3Q9NT62 314 aa11.23□□□□□ -0.61
CDKL5-209ENST00000635828 EZH2Q15910 746 aaKnown RBP11.22□□□□□ -0.61
CDKL5-209ENST00000635828 LRRC4BQ9NT99 713 aa11.22□□□□□ -0.61
CDKL5-209ENST00000635828 RTF1Q92541 710 aaKnown RBP11.22□□□□□ -0.61
CDKL5-209ENST00000635828 NEFMP07197 916 aa11.22□□□□□ -0.61
CDKL5-209ENST00000635828 TMOD3Q9NYL9 352 aa11.22□□□□□ -0.61
CDKL5-209ENST00000635828 PIP4K2AP48426 406 aaPredicted RBP11.21□□□□□ -0.61
CDKL5-209ENST00000635828 AMIGO3Q86WK7 504 aa11.21□□□□□ -0.61
CDKL5-209ENST00000635828 BCL11BQ9C0K0 894 aaPredicted RBP11.2□□□□□ -0.62
CDKL5-209ENST00000635828 ELL2O00472 640 aaPredicted RBP11.2□□□□□ -0.62
CDKL5-209ENST00000635828 TEFQ10587 303 aa11.2□□□□□ -0.62
CDKL5-209ENST00000635828 BTBD11A6QL63 1104 aa11.2□□□□□ -0.62
CDKL5-209ENST00000635828 MRC1P22897 1456 aa11.19□□□□□ -0.62
CDKL5-209ENST00000635828 ZNF521Q96K83 1311 aa11.19□□□□□ -0.62
CDKL5-209ENST00000635828 ZNF496Q96IT1 587 aaPredicted RBP11.19□□□□□ -0.62
CDKL5-209ENST00000635828 RBM42Q9BTD8 480 aaKnown RBP11.19□□□□□ -0.62
CDKL5-209ENST00000635828 PNNQ9H307 717 aaKnown RBP11.19□□□□□ -0.62
CDKL5-209ENST00000635828 ERVV-2B6SEH9 535 aa11.19□□□□□ -0.62
CDKL5-209ENST00000635828 MBIPQ9NS73 344 aa11.19□□□□□ -0.62
CDKL5-209ENST00000635828 NECTIN2Q92692 538 aa11.18□□□□□ -0.62
CDKL5-209ENST00000635828 ITPK1Q13572 414 aa11.18□□□□□ -0.62
CDKL5-209ENST00000635828 PALLDQ8WX93 1383 aa11.18□□□□□ -0.62
CDKL5-209ENST00000635828 ZNF790Q6PG37 636 aa11.18□□□□□ -0.62
CDKL5-209ENST00000635828 TSPYL6Q8N831 410 aa11.18□□□□□ -0.62
CDKL5-209ENST00000635828 PDGFDQ9GZP0 370 aaPredicted RBP11.18□□□□□ -0.62
CDKL5-209ENST00000635828 PAPPAQ13219 1627 aa11.18□□□□□ -0.62
CDKL5-209ENST00000635828 KCPQ6ZWJ8 1503 aa11.18□□□□□ -0.62
CDKL5-209ENST00000635828 C5P01031 1676 aa11.17□□□□□ -0.62
CDKL5-209ENST00000635828 TCERG1O14776 1098 aaKnown RBP11.17□□□□□ -0.62
CDKL5-209ENST00000635828 HSP90AB1P08238 724 aaKnown RBP11.17□□□□□ -0.62
CDKL5-209ENST00000635828 TAF7Q15545 349 aaPredicted RBP11.17□□□□□ -0.62
CDKL5-209ENST00000635828 KDM3BQ7LBC6 1761 aa11.17□□□□□ -0.62
CDKL5-209ENST00000635828 CAMKK2Q96RR4 588 aa11.17□□□□□ -0.62
CDKL5-209ENST00000635828 LY75O60449 1722 aa11.16□□□□□ -0.62
CDKL5-209ENST00000635828 TSPYL4Q9UJ04 414 aa11.16□□□□□ -0.62
CDKL5-209ENST00000635828 UBR2Q8IWV8 1755 aa11.16□□□□□ -0.62
CDKL5-209ENST00000635828 ANO8Q9HCE9 1232 aaPredicted RBP11.16□□□□□ -0.62
CDKL5-209ENST00000635828 MYH14Q7Z406 1995 aaKnown RBP11.16□□□□□ -0.62
CDKL5-209ENST00000635828 TXNRD1Q16881 649 aa11.16□□□□□ -0.62
CDKL5-209ENST00000635828 C8orf58Q8NAV2 365 aa11.16□□□□□ -0.62
CDKL5-209ENST00000635828 USP16Q9Y5T5 823 aa11.16□□□□□ -0.62
CDKL5-209ENST00000635828 LOC102724428A0A0B4J2F2 783 aa11.15□□□□□ -0.62
CDKL5-209ENST00000635828 ZNF853P0CG23 659 aa11.15□□□□□ -0.62
CDKL5-209ENST00000635828 SIK1P57059 783 aa11.15□□□□□ -0.62
CDKL5-209ENST00000635828 LINC00116Q8NCU8 138 aa11.15□□□□□ -0.62
CDKL5-209ENST00000635828 CHL1O00533 1208 aa11.15□□□□□ -0.63
CDKL5-209ENST00000635828 HTATSF1O43719 755 aaKnown RBP11.15□□□□□ -0.63
CDKL5-209ENST00000635828 ANXA1P04083 346 aa11.15□□□□□ -0.63
CDKL5-209ENST00000635828 DNAJC10Q8IXB1 793 aa11.15□□□□□ -0.63
CDKL5-209ENST00000635828 ATP6V1AP38606 617 aa11.14□□□□□ -0.63
CDKL5-209ENST00000635828 PLEKHG2Q9H7P9 1386 aa11.14□□□□□ -0.63
CDKL5-209ENST00000635828 EIF4A1P60842 406 aaKnown RBP11.14□□□□□ -0.63
CDKL5-209ENST00000635828 ZNF827Q17R98 1081 aa11.14□□□□□ -0.63
CDKL5-209ENST00000635828 FANCIQ9NVI1 1328 aa11.14□□□□□ -0.63
CDKL5-209ENST00000635828 TJP1Q07157 1748 aa11.14□□□□□ -0.63
CDKL5-209ENST00000635828 TAF1LQ8IZX4 1826 aa11.14□□□□□ -0.63
CDKL5-209ENST00000635828 CCDC27Q2M243 656 aa11.14□□□□□ -0.63
CDKL5-209ENST00000635828 ZNF428Q96B54 188 aa11.14□□□□□ -0.63
CDKL5-209ENST00000635828 CFAP44Q96MT7 982 aa11.14□□□□□ -0.63
CDKL5-209ENST00000635828 CCNL1Q9UK58 526 aaPredicted RBP11.14□□□□□ -0.63
CDKL5-209ENST00000635828 A1BGP04217 495 aa11.12□□□□□ -0.63
CDKL5-209ENST00000635828 TTC5Q8N0Z6 440 aa11.12□□□□□ -0.63
CDKL5-209ENST00000635828 NUP188Q5SRE5 1749 aa11.12□□□□□ -0.63
CDKL5-209ENST00000635828 EIF2S2P20042 333 aaKnown RBP11.12□□□□□ -0.63
CDKL5-209ENST00000635828 EXOSC9Q06265 439 aaKnown RBP11.12□□□□□ -0.63
CDKL5-209ENST00000635828 SF3B2Q13435 895 aaKnown RBP11.12□□□□□ -0.63
CDKL5-209ENST00000635828 PLSCR1O15162 318 aa11.12□□□□□ -0.63
CDKL5-209ENST00000635828 LMOD3Q0VAK6 560 aa11.12□□□□□ -0.63
CDKL5-209ENST00000635828 PROSER3Q2NL68 480 aa11.12□□□□□ -0.63
CDKL5-209ENST00000635828 PSDA5PKW4 1024 aaPredicted RBP11.11□□□□□ -0.63
CDKL5-209ENST00000635828 TUBGCP6Q96RT7 1819 aa11.11□□□□□ -0.63
CDKL5-209ENST00000635828 SLFN5Q08AF3 891 aa11.11□□□□□ -0.63
CDKL5-209ENST00000635828 SOCS7O14512 581 aa11.11□□□□□ -0.63
CDKL5-209ENST00000635828 GIGYF1O75420 1035 aaPredicted RBP11.11□□□□□ -0.63
CDKL5-209ENST00000635828 PHF14O94880 888 aa11.11□□□□□ -0.63
CDKL5-209ENST00000635828 GOLGA2Q08379 1002 aa11.11□□□□□ -0.63
CDKL5-209ENST00000635828 DUSP27Q5VZP5 1158 aa11.11□□□□□ -0.63
CDKL5-209ENST00000635828 IFT57Q9NWB7 429 aa11.11□□□□□ -0.63
CDKL5-209ENST00000635828 COL5A3P25940 1745 aaPredicted RBP11.1□□□□□ -0.63
CDKL5-209ENST00000635828 BAG6P46379 1132 aa11.1□□□□□ -0.63
CDKL5-209ENST00000635828 NGEFQ8N5V2 710 aa11.1□□□□□ -0.63
CDKL5-209ENST00000635828 RREB1Q92766 1687 aa11.1□□□□□ -0.63
CDKL5-209ENST00000635828 HEG1Q9ULI3 1381 aa11.1□□□□□ -0.63
CDKL5-209ENST00000635828 BCL2L13Q9BXK5 485 aa11.1□□□□□ -0.63
CDKL5-209ENST00000635828 ZNF330Q9Y3S2 320 aaPredicted RBP11.1□□□□□ -0.63
CDKL5-209ENST00000635828 WDR63Q8IWG1 891 aa11.1□□□□□ -0.63
CDKL5-209ENST00000635828 ZBTB1Q9Y2K1 713 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms