RNA–Protein interactions for RNA: ENST00000635751.1

CLN8-208, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-208ENST00000635751 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.66■■□□□ 1.7
CLN8-208ENST00000635751 DCAF5Q96JK2 942 aa25.66■■□□□ 1.7
CLN8-208ENST00000635751 IFT57Q9NWB7 429 aa25.66■■□□□ 1.7
CLN8-208ENST00000635751 GNAI1P63096 354 aa25.65■■□□□ 1.7
CLN8-208ENST00000635751 TSR2Q969E8 191 aaKnown RBP25.65■■□□□ 1.7
CLN8-208ENST00000635751 CFAP44Q96MT7 982 aa25.65■■□□□ 1.7
CLN8-208ENST00000635751 MYH16Q9H6N6 1097 aa25.65■■□□□ 1.7
CLN8-208ENST00000635751 SIPA1L3O60292 1781 aaPredicted RBP25.65■■□□□ 1.7
CLN8-208ENST00000635751 ZNF853P0CG23 659 aa25.65■■□□□ 1.7
CLN8-208ENST00000635751 NKX1-1Q15270 411 aaPredicted RBP25.65■■□□□ 1.7
CLN8-208ENST00000635751 MSH5O43196 834 aa25.64■■□□□ 1.7
CLN8-208ENST00000635751 TEFQ10587 303 aa25.64■■□□□ 1.7
CLN8-208ENST00000635751 MIS18AQ9NYP9 233 aa25.63■■□□□ 1.69
CLN8-208ENST00000635751 ONECUT3O60422 494 aaPredicted RBP25.63■■□□□ 1.69
CLN8-208ENST00000635751 TAF7Q15545 349 aaPredicted RBP25.63■■□□□ 1.69
CLN8-208ENST00000635751 MBIPQ9NS73 344 aa25.62■■□□□ 1.69
CLN8-208ENST00000635751 TOGARAM1Q9Y4F4 1720 aa25.61■■□□□ 1.69
CLN8-208ENST00000635751 CHL1O00533 1208 aa25.61■■□□□ 1.69
CLN8-208ENST00000635751 RGS17Q9UGC6 210 aaPredicted RBP25.61■■□□□ 1.69
CLN8-208ENST00000635751 MARCH10Q8NA82 808 aaPredicted RBP25.6■■□□□ 1.69
CLN8-208ENST00000635751 ITGB4P16144 1822 aa25.6■■□□□ 1.69
CLN8-208ENST00000635751 TCERG1O14776 1098 aaKnown RBP25.59■■□□□ 1.69
CLN8-208ENST00000635751 RBM6P78332 1123 aaKnown RBP25.59■■□□□ 1.69
CLN8-208ENST00000635751 SEPT12Q8IYM1 358 aa25.59■■□□□ 1.69
CLN8-208ENST00000635751 SLC52A2Q9HAB3 445 aa25.59■■□□□ 1.69
CLN8-208ENST00000635751 C20orf194Q5TEA3 1177 aa25.58■■□□□ 1.69
CLN8-208ENST00000635751 NFATC2IPQ8NCF5 419 aa25.58■■□□□ 1.69
CLN8-208ENST00000635751 TSPYL4Q9UJ04 414 aa25.58■■□□□ 1.69
CLN8-208ENST00000635751 BRWD3Q6RI45 1802 aa25.58■■□□□ 1.69
CLN8-208ENST00000635751 CABP4P57796 275 aa25.57■■□□□ 1.68
CLN8-208ENST00000635751 KDM3BQ7LBC6 1761 aa25.57■■□□□ 1.68
CLN8-208ENST00000635751 ERVV-2B6SEH9 535 aa25.56■■□□□ 1.68
CLN8-208ENST00000635751 MRC1P22897 1456 aa25.56■■□□□ 1.68
CLN8-208ENST00000635751 BTBD11A6QL63 1104 aa25.56■■□□□ 1.68
CLN8-208ENST00000635751 EXOSC9Q06265 439 aaKnown RBP25.56■■□□□ 1.68
CLN8-208ENST00000635751 DOT1LQ8TEK3 1739 aa25.56■■□□□ 1.68
CLN8-208ENST00000635751 BABAM1Q9NWV8 329 aa25.54■■□□□ 1.68
CLN8-208ENST00000635751 RXRBP28702 533 aa25.53■■□□□ 1.68
CLN8-208ENST00000635751 POTEAQ6S8J7 498 aa25.53■■□□□ 1.68
CLN8-208ENST00000635751 MS4A1P11836 297 aa25.51■■□□□ 1.67
CLN8-208ENST00000635751 KCNQ3O43525 872 aa25.51■■□□□ 1.67
CLN8-208ENST00000635751 FAM182BQ5T319 152 aa25.5■■□□□ 1.67
CLN8-208ENST00000635751 ELL2O00472 640 aaPredicted RBP25.49■■□□□ 1.67
CLN8-208ENST00000635751 SLC39A6Q13433 755 aa25.49■■□□□ 1.67
CLN8-208ENST00000635751 KRT24Q2M2I5 525 aa25.49■■□□□ 1.67
CLN8-208ENST00000635751 C8orf58Q8NAV2 365 aa25.49■■□□□ 1.67
CLN8-208ENST00000635751 ACSBG1Q96GR2 724 aa25.49■■□□□ 1.67
CLN8-208ENST00000635751 TMOD3Q9NYL9 352 aa25.49■■□□□ 1.67
CLN8-208ENST00000635751 ERICH6Q7L0X2 663 aa25.49■■□□□ 1.67
CLN8-208ENST00000635751 SYTL4Q96C24 671 aaPredicted RBP25.49■■□□□ 1.67
CLN8-208ENST00000635751 PRIM1P49642 420 aaKnown RBP25.48■■□□□ 1.67
CLN8-208ENST00000635751 TSPYL6Q8N831 410 aa25.48■■□□□ 1.67
CLN8-208ENST00000635751 ZNF790Q6PG37 636 aa25.47■■□□□ 1.67
CLN8-208ENST00000635751 PIGBQ92521 554 aa25.47■■□□□ 1.67
CLN8-208ENST00000635751 SBF2Q86WG5 1849 aa25.46■■□□□ 1.67
CLN8-208ENST00000635751 KDM2BQ8NHM5 1336 aa25.46■■□□□ 1.67
CLN8-208ENST00000635751 BCAR3O75815 825 aa25.45■■□□□ 1.66
CLN8-208ENST00000635751 EIF4A1P60842 406 aaKnown RBP25.45■■□□□ 1.66
CLN8-208ENST00000635751 CENPQQ7L2Z9 268 aaPredicted RBP25.45■■□□□ 1.66
CLN8-208ENST00000635751 TWISTNBQ3B726 338 aaPredicted RBP25.44■■□□□ 1.66
CLN8-208ENST00000635751 KRT27Q7Z3Y8 459 aa25.44■■□□□ 1.66
CLN8-208ENST00000635751 BCL9O00512 1426 aa25.44■■□□□ 1.66
CLN8-208ENST00000635751 PAPPAQ13219 1627 aa25.44■■□□□ 1.66
CLN8-208ENST00000635751 ANP32AP39687 249 aaKnown RBP25.44■■□□□ 1.66
CLN8-208ENST00000635751 VAMP4O75379 141 aa25.43■■□□□ 1.66
CLN8-208ENST00000635751 TTC5Q8N0Z6 440 aa25.43■■□□□ 1.66
CLN8-208ENST00000635751 KCNQ2O43526 872 aa25.42■■□□□ 1.66
CLN8-208ENST00000635751 CT47B1P0C2W7 299 aaPredicted RBP25.42■■□□□ 1.66
CLN8-208ENST00000635751 UBR2Q8IWV8 1755 aa25.42■■□□□ 1.66
CLN8-208ENST00000635751 RGS12O14924 1447 aa25.42■■□□□ 1.66
CLN8-208ENST00000635751 PDE3AQ14432 1141 aa25.4■■□□□ 1.66
CLN8-208ENST00000635751 ASAP1Q9ULH1 1129 aa25.4■■□□□ 1.66
CLN8-208ENST00000635751 PDE4AP27815 886 aa25.4■■□□□ 1.66
CLN8-208ENST00000635751 RARSP54136 660 aaKnown RBP25.39■■□□□ 1.65
CLN8-208ENST00000635751 ZNF496Q96IT1 587 aaPredicted RBP25.39■■□□□ 1.65
CLN8-208ENST00000635751 NHSQ6T4R5 1651 aa25.38■■□□□ 1.65
CLN8-208ENST00000635751 ATG3Q9NT62 314 aa25.38■■□□□ 1.65
CLN8-208ENST00000635751 HEG1Q9ULI3 1381 aa25.38■■□□□ 1.65
CLN8-208ENST00000635751 BACH2Q9BYV9 841 aa25.37■■□□□ 1.65
CLN8-208ENST00000635751 FMNL2Q96PY5 1086 aa25.37■■□□□ 1.65
CLN8-208ENST00000635751 C5P01031 1676 aa25.37■■□□□ 1.65
CLN8-208ENST00000635751 EP400Q96L91 3159 aa25.36■■□□□ 1.65
CLN8-208ENST00000635751 BTAF1O14981 1849 aa25.36■■□□□ 1.65
CLN8-208ENST00000635751 PTCD1O75127 700 aaKnown RBP25.36■■□□□ 1.65
CLN8-208ENST00000635751 PTF1AQ7RTS3 328 aa25.36■■□□□ 1.65
CLN8-208ENST00000635751 BCL2L13Q9BXK5 485 aa25.36■■□□□ 1.65
CLN8-208ENST00000635751 KCPQ6ZWJ8 1503 aa25.36■■□□□ 1.65
CLN8-208ENST00000635751 GIGYF1O75420 1035 aaPredicted RBP25.35■■□□□ 1.65
CLN8-208ENST00000635751 FAM196AQ6ZSG2 479 aa25.35■■□□□ 1.65
CLN8-208ENST00000635751 PRAMEF22A3QJZ6 481 aa25.35■■□□□ 1.65
CLN8-208ENST00000635751 CANXP27824 592 aaKnown RBP25.35■■□□□ 1.65
CLN8-208ENST00000635751 SSH1Q8WYL5 1049 aa25.35■■□□□ 1.65
CLN8-208ENST00000635751 ZNF428Q96B54 188 aa25.35■■□□□ 1.65
CLN8-208ENST00000635751 IPO9Q96P70 1041 aaKnown RBP25.34■■□□□ 1.65
CLN8-208ENST00000635751 NOP58Q9Y2X3 529 aaKnown RBP25.34■■□□□ 1.65
CLN8-208ENST00000635751 NECTIN2Q92692 538 aa25.33■■□□□ 1.65
CLN8-208ENST00000635751 CACNA1FO60840 1977 aa25.33■■□□□ 1.65
CLN8-208ENST00000635751 SOS1Q07889 1333 aaPredicted RBP25.32■■□□□ 1.64
CLN8-208ENST00000635751 HOXB7P09629 217 aa25.32■■□□□ 1.64
CLN8-208ENST00000635751 EIF2S2P20042 333 aaKnown RBP25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms