RNA–Protein interactions for RNA: ENST00000635590.1

SMARCA2-243, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-243ENST00000635590 GAS2L2Q8NHY3 880 aa10.35□□□□□ -0.75
SMARCA2-243ENST00000635590 COL26A1Q96A83 441 aa10.35□□□□□ -0.75
SMARCA2-243ENST00000635590 INPP5FQ9Y2H2 1132 aa10.35□□□□□ -0.75
SMARCA2-243ENST00000635590 TMED8Q6PL24 325 aaPredicted RBP10.35□□□□□ -0.75
SMARCA2-243ENST00000635590 TSEN2Q8NCE0 465 aaKnown RBP10.35□□□□□ -0.75
SMARCA2-243ENST00000635590 ADAM32Q8TC27 787 aa10.35□□□□□ -0.75
SMARCA2-243ENST00000635590 SETDB2Q96T68 719 aa10.35□□□□□ -0.75
SMARCA2-243ENST00000635590 NOP58Q9Y2X3 529 aaKnown RBP10.35□□□□□ -0.75
SMARCA2-243ENST00000635590 IGHA2P01877 340 aa10.34□□□□□ -0.75
SMARCA2-243ENST00000635590 ANAPC15P60006 121 aa10.34□□□□□ -0.75
SMARCA2-243ENST00000635590 CITED4Q96RK1 184 aa10.34□□□□□ -0.75
SMARCA2-243ENST00000635590 PARNO95453 639 aaKnown RBP10.33□□□□□ -0.76
SMARCA2-243ENST00000635590 PUS10Q3MIT2 529 aaKnown RBP10.33□□□□□ -0.76
SMARCA2-243ENST00000635590 CCDC181Q5TID7 509 aa10.33□□□□□ -0.76
SMARCA2-243ENST00000635590 RNF19BQ6ZMZ0 732 aa10.33□□□□□ -0.76
SMARCA2-243ENST00000635590 BRINP2Q9C0B6 783 aa10.33□□□□□ -0.76
SMARCA2-243ENST00000635590 CEP164Q9UPV0 1460 aa10.33□□□□□ -0.76
SMARCA2-243ENST00000635590 MRPL42Q9Y6G3 142 aaKnown RBP10.33□□□□□ -0.76
SMARCA2-243ENST00000635590 TPD52L2O43399 206 aaKnown RBP10.33□□□□□ -0.76
SMARCA2-243ENST00000635590 CTHP32929 405 aa10.33□□□□□ -0.76
SMARCA2-243ENST00000635590 HSD3B2P26439 372 aa10.32□□□□□ -0.76
SMARCA2-243ENST00000635590 SLC4A3P48751 1232 aa10.32□□□□□ -0.76
SMARCA2-243ENST00000635590 ZNF394Q53GI3 561 aa10.32□□□□□ -0.76
SMARCA2-243ENST00000635590 MCF2L2Q86YR7 1114 aa10.32□□□□□ -0.76
SMARCA2-243ENST00000635590 DMRTB1Q96MA1 342 aa10.32□□□□□ -0.76
SMARCA2-243ENST00000635590 MYH16Q9H6N6 1097 aa10.32□□□□□ -0.76
SMARCA2-243ENST00000635590 DDX41Q9UJV9 622 aaKnown RBP10.32□□□□□ -0.76
SMARCA2-243ENST00000635590 HDGFP51858 240 aaKnown RBP10.31□□□□□ -0.76
SMARCA2-243ENST00000635590 RACK1P63244 317 aaKnown RBP10.31□□□□□ -0.76
SMARCA2-243ENST00000635590 PTPRNQ16849 979 aa10.31□□□□□ -0.76
SMARCA2-243ENST00000635590 GPKOWQ92917 476 aaPredicted RBP eCLIP10.31□□□□□ -0.76
SMARCA2-243ENST00000635590 USB1Q9BQ65 265 aaKnown RBP10.31□□□□□ -0.76
SMARCA2-243ENST00000635590 CCDC87Q9NVE4 849 aa10.31□□□□□ -0.76
SMARCA2-243ENST00000635590 PCDHGB7Q9Y5F8 929 aa10.31□□□□□ -0.76
SMARCA2-243ENST00000635590 GPR182O15218 404 aa10.3□□□□□ -0.76
SMARCA2-243ENST00000635590 STK10O94804 968 aaKnown RBP10.3□□□□□ -0.76
SMARCA2-243ENST00000635590 ATP2B2Q01814 1243 aa10.3□□□□□ -0.76
SMARCA2-243ENST00000635590 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.3□□□□□ -0.76
SMARCA2-243ENST00000635590 FANCD2Q9BXW9 1451 aa10.3□□□□□ -0.76
SMARCA2-243ENST00000635590 GPR153Q6NV75 609 aa10.3□□□□□ -0.76
SMARCA2-243ENST00000635590 BLOC1S3Q6QNY0 202 aa10.3□□□□□ -0.76
SMARCA2-243ENST00000635590 RNF187Q5TA31 235 aaPredicted RBP10.29□□□□□ -0.76
SMARCA2-243ENST00000635590 ZCRB1Q8TBF4 217 aaKnown RBP10.29□□□□□ -0.76
SMARCA2-243ENST00000635590 SEPT9Q9UHD8 586 aaPredicted RBP10.29□□□□□ -0.76
SMARCA2-243ENST00000635590 PSDA5PKW4 1024 aaPredicted RBP10.28□□□□□ -0.76
SMARCA2-243ENST00000635590 FZD6O60353 706 aa10.28□□□□□ -0.76
SMARCA2-243ENST00000635590 CLSTN1O94985 981 aa10.28□□□□□ -0.76
SMARCA2-243ENST00000635590 FGRP09769 529 aa10.28□□□□□ -0.76
SMARCA2-243ENST00000635590 ZNF654Q8IZM8 581 aa10.28□□□□□ -0.76
SMARCA2-243ENST00000635590 FAM129BQ96TA1 746 aa10.28□□□□□ -0.76
SMARCA2-243ENST00000635590 CYLDQ9NQC7 956 aa10.28□□□□□ -0.76
SMARCA2-243ENST00000635590 COL4A3BPQ9Y5P4 624 aa10.28□□□□□ -0.76
SMARCA2-243ENST00000635590 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.28□□□□□ -0.76
SMARCA2-243ENST00000635590 M0R2N6 131 aa10.28□□□□□ -0.76
SMARCA2-243ENST00000635590 ARMC2Q8NEN0 867 aa10.28□□□□□ -0.76
SMARCA2-243ENST00000635590 ARHGAP9Q9BRR9 750 aa10.28□□□□□ -0.76
SMARCA2-243ENST00000635590 PRDM16Q9HAZ2 1276 aa10.28□□□□□ -0.76
SMARCA2-243ENST00000635590 EIF1AXP47813 144 aaKnown RBP10.26□□□□□ -0.77
SMARCA2-243ENST00000635590 KMT5BQ4FZB7 885 aa10.26□□□□□ -0.77
SMARCA2-243ENST00000635590 EXOC8Q8IYI6 725 aa10.26□□□□□ -0.77
SMARCA2-243ENST00000635590 ALKBH8Q96BT7 664 aaKnown RBP10.26□□□□□ -0.77
SMARCA2-243ENST00000635590 FOXO3O43524 673 aa10.26□□□□□ -0.77
SMARCA2-243ENST00000635590 GIGYF1O75420 1035 aaPredicted RBP10.26□□□□□ -0.77
SMARCA2-243ENST00000635590 MAP4K4O95819 1239 aaPredicted RBP10.26□□□□□ -0.77
SMARCA2-243ENST00000635590 CTSHP09668 335 aa10.26□□□□□ -0.77
SMARCA2-243ENST00000635590 JUNDP17535 347 aa10.26□□□□□ -0.77
SMARCA2-243ENST00000635590 NFE2L2Q16236 605 aa10.26□□□□□ -0.77
SMARCA2-243ENST00000635590 GORABQ5T7V8 394 aa10.26□□□□□ -0.77
SMARCA2-243ENST00000635590 NBPF14Q5TI25 921 aa10.26□□□□□ -0.77
SMARCA2-243ENST00000635590 DZIP3Q86Y13 1208 aaKnown RBP10.26□□□□□ -0.77
SMARCA2-243ENST00000635590 CFTRP13569 1480 aa10.25□□□□□ -0.77
SMARCA2-243ENST00000635590 IGFBP4P22692 258 aa10.25□□□□□ -0.77
SMARCA2-243ENST00000635590 ENOX2Q16206 610 aaKnown RBP10.25□□□□□ -0.77
SMARCA2-243ENST00000635590 SAMD7Q7Z3H4 446 aa10.25□□□□□ -0.77
SMARCA2-243ENST00000635590 ZBTB33Q86T24 672 aa10.25□□□□□ -0.77
SMARCA2-243ENST00000635590 USP48Q86UV5 1035 aa10.25□□□□□ -0.77
SMARCA2-243ENST00000635590 VPS37DQ86XT2 251 aa10.25□□□□□ -0.77
SMARCA2-243ENST00000635590 CRELD1Q96HD1 420 aa10.25□□□□□ -0.77
SMARCA2-243ENST00000635590 SAP130Q9H0E3 1048 aa10.25□□□□□ -0.77
SMARCA2-243ENST00000635590 IFT57Q9NWB7 429 aa10.25□□□□□ -0.77
SMARCA2-243ENST00000635590 XRCC5P13010 732 aaKnown RBP10.24□□□□□ -0.77
SMARCA2-243ENST00000635590 GNA15P30679 374 aa10.24□□□□□ -0.77
SMARCA2-243ENST00000635590 AAMPQ13685 434 aa10.24□□□□□ -0.77
SMARCA2-243ENST00000635590 FILIP1Q7Z7B0 1213 aa10.24□□□□□ -0.77
SMARCA2-243ENST00000635590 TICAM2Q86XR7 235 aa10.24□□□□□ -0.77
SMARCA2-243ENST00000635590 MRFAP1L1Q96HT8 127 aa10.24□□□□□ -0.77
SMARCA2-243ENST00000635590 KCNK17Q96T54 332 aa10.24□□□□□ -0.77
SMARCA2-243ENST00000635590 SRA1Q9HD15 236 aaKnown RBP10.24□□□□□ -0.77
SMARCA2-243ENST00000635590 PCDH12Q9NPG4 1184 aa10.24□□□□□ -0.77
SMARCA2-243ENST00000635590 CHPF2Q9P2E5 772 aa10.24□□□□□ -0.77
SMARCA2-243ENST00000635590 RIMBP3CA6NJZ7 1639 aa10.24□□□□□ -0.77
SMARCA2-243ENST00000635590 RIMBP3BA6NNM3 1639 aa10.24□□□□□ -0.77
SMARCA2-243ENST00000635590 RIMBP3Q9UFD9 1639 aa10.24□□□□□ -0.77
SMARCA2-243ENST00000635590 PNMA6FA0A0J9YX94 578 aa10.23□□□□□ -0.77
SMARCA2-243ENST00000635590 RNF40O75150 1001 aa10.23□□□□□ -0.77
SMARCA2-243ENST00000635590 HOXB3P14651 431 aaPredicted RBP10.23□□□□□ -0.77
SMARCA2-243ENST00000635590 DOK7Q18PE1 504 aa10.23□□□□□ -0.77
SMARCA2-243ENST00000635590 RNF20Q5VTR2 975 aa10.23□□□□□ -0.77
SMARCA2-243ENST00000635590 ALG1LQ6GMV1 187 aa10.23□□□□□ -0.77
SMARCA2-243ENST00000635590 BRICD5Q6PL45 260 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms