RNA–Protein interactions for RNA: ENST00000635388.1

SMARCA2-239, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-239ENST00000635388 WASF2Q9Y6W5 498 aa11.96□□□□□ -0.49
SMARCA2-239ENST00000635388 WASLO00401 505 aaPredicted RBP11.95□□□□□ -0.5
SMARCA2-239ENST00000635388 PHLDB3Q6NSJ2 640 aa11.95□□□□□ -0.5
SMARCA2-239ENST00000635388 IFT140Q96RY7 1462 aa11.95□□□□□ -0.5
SMARCA2-239ENST00000635388 CYP4X1Q8N118 509 aa11.94□□□□□ -0.5
SMARCA2-239ENST00000635388 ITPKCQ96DU7 683 aa11.94□□□□□ -0.5
SMARCA2-239ENST00000635388 ZNF358Q9NW07 568 aa11.94□□□□□ -0.5
SMARCA2-239ENST00000635388 M0R2N6 131 aa11.93□□□□□ -0.5
SMARCA2-239ENST00000635388 AEBP1Q8IUX7 1158 aa11.93□□□□□ -0.5
SMARCA2-239ENST00000635388 KDF1Q8NAX2 398 aaPredicted RBP11.93□□□□□ -0.5
SMARCA2-239ENST00000635388 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.93□□□□□ -0.5
SMARCA2-239ENST00000635388 ETNK1Q9HBU6 452 aa11.93□□□□□ -0.5
SMARCA2-239ENST00000635388 EIF4G3O43432 1585 aaKnown RBP11.92□□□□□ -0.5
SMARCA2-239ENST00000635388 TTC24A2A3L6 582 aaPredicted RBP11.92□□□□□ -0.5
SMARCA2-239ENST00000635388 TIMP2P16035 220 aa11.92□□□□□ -0.5
SMARCA2-239ENST00000635388 CYP2U1Q7Z449 544 aa11.92□□□□□ -0.5
SMARCA2-239ENST00000635388 TRIM52Q96A61 297 aa11.92□□□□□ -0.5
SMARCA2-239ENST00000635388 TARBP1Q13395 1621 aaKnown RBP11.91□□□□□ -0.5
SMARCA2-239ENST00000635388 GDF10P55107 478 aa11.91□□□□□ -0.5
SMARCA2-239ENST00000635388 CBLBQ13191 982 aa11.91□□□□□ -0.5
SMARCA2-239ENST00000635388 Q6ZVU0 165 aa11.91□□□□□ -0.5
SMARCA2-239ENST00000635388 ZFAND3Q9H8U3 227 aa11.91□□□□□ -0.5
SMARCA2-239ENST00000635388 ZNF608Q9ULD9 1512 aaPredicted RBP11.91□□□□□ -0.5
SMARCA2-239ENST00000635388 RGS20O76081 388 aa11.9□□□□□ -0.5
SMARCA2-239ENST00000635388 ZIC2O95409 532 aaPredicted RBP11.9□□□□□ -0.5
SMARCA2-239ENST00000635388 ADH1AP07327 375 aa11.9□□□□□ -0.5
SMARCA2-239ENST00000635388 SSFA2P28290 1259 aa11.9□□□□□ -0.5
SMARCA2-239ENST00000635388 OCLNQ16625 522 aa11.9□□□□□ -0.5
SMARCA2-239ENST00000635388 TSEN2Q8NCE0 465 aaKnown RBP11.9□□□□□ -0.5
SMARCA2-239ENST00000635388 POLA1P09884 1462 aaPredicted RBP11.89□□□□□ -0.51
SMARCA2-239ENST00000635388 GNRH1P01148 92 aa11.89□□□□□ -0.51
SMARCA2-239ENST00000635388 EPHA4P54764 986 aa11.89□□□□□ -0.51
SMARCA2-239ENST00000635388 WDR4P57081 412 aaKnown RBP11.89□□□□□ -0.51
SMARCA2-239ENST00000635388 KCNA1Q09470 495 aa11.89□□□□□ -0.51
SMARCA2-239ENST00000635388 ESF1Q9H501 851 aaKnown RBP11.89□□□□□ -0.51
SMARCA2-239ENST00000635388 RBM19Q9Y4C8 960 aaKnown RBP11.89□□□□□ -0.51
SMARCA2-239ENST00000635388 CUX1P39880 1505 aa11.88□□□□□ -0.51
SMARCA2-239ENST00000635388 INHAP05111 366 aa11.88□□□□□ -0.51
SMARCA2-239ENST00000635388 ZBTB7CA1YPR0 619 aa11.87□□□□□ -0.51
SMARCA2-239ENST00000635388 ATP2B4P23634 1241 aa11.87□□□□□ -0.51
SMARCA2-239ENST00000635388 HPS1Q92902 700 aa11.87□□□□□ -0.51
SMARCA2-239ENST00000635388 ARHGEF10LQ9HCE6 1279 aa11.87□□□□□ -0.51
SMARCA2-239ENST00000635388 RAB6BQ9NRW1 208 aa11.87□□□□□ -0.51
SMARCA2-239ENST00000635388 IL2RAP01589 272 aa11.86□□□□□ -0.51
SMARCA2-239ENST00000635388 B4GALNT3Q6L9W6 998 aa11.86□□□□□ -0.51
SMARCA2-239ENST00000635388 HRH3Q9Y5N1 445 aa11.86□□□□□ -0.51
SMARCA2-239ENST00000635388 FGD5Q6ZNL6 1462 aa11.86□□□□□ -0.51
SMARCA2-239ENST00000635388 LGR5O75473 907 aa11.85□□□□□ -0.51
SMARCA2-239ENST00000635388 SLC4A9Q96Q91 983 aa11.85□□□□□ -0.51
SMARCA2-239ENST00000635388 CXXC1Q9P0U4 656 aaPredicted RBP11.85□□□□□ -0.51
SMARCA2-239ENST00000635388 PRMT3O60678 531 aa11.84□□□□□ -0.51
SMARCA2-239ENST00000635388 WEE1P30291 646 aa11.84□□□□□ -0.51
SMARCA2-239ENST00000635388 MEIOBQ8N635 442 aa11.84□□□□□ -0.51
SMARCA2-239ENST00000635388 C1orf216Q8TAB5 229 aa11.84□□□□□ -0.51
SMARCA2-239ENST00000635388 PRIMPOLQ96LW4 560 aa11.84□□□□□ -0.51
SMARCA2-239ENST00000635388 WDR97A6NE52 1622 aa11.84□□□□□ -0.51
SMARCA2-239ENST00000635388 TXNDC2Q86VQ3 553 aa11.83□□□□□ -0.52
SMARCA2-239ENST00000635388 XAGE2Q96GT9 111 aa11.83□□□□□ -0.52
SMARCA2-239ENST00000635388 AGBL1Q96MI9 1066 aa11.83□□□□□ -0.52
SMARCA2-239ENST00000635388 PODXL2Q9NZ53 605 aa11.83□□□□□ -0.52
SMARCA2-239ENST00000635388 SERTAD1Q9UHV2 236 aa11.83□□□□□ -0.52
SMARCA2-239ENST00000635388 GNEQ9Y223 722 aaKnown RBP11.83□□□□□ -0.52
SMARCA2-239ENST00000635388 CHD1O14646 1710 aa11.83□□□□□ -0.52
SMARCA2-239ENST00000635388 RAD54L2Q9Y4B4 1467 aa11.83□□□□□ -0.52
SMARCA2-239ENST00000635388 PATL2C9JE40 543 aaKnown RBP11.82□□□□□ -0.52
SMARCA2-239ENST00000635388 BACH1O14867 736 aa11.82□□□□□ -0.52
SMARCA2-239ENST00000635388 PTGIRP43119 386 aa11.82□□□□□ -0.52
SMARCA2-239ENST00000635388 FOXK2Q01167 660 aa11.82□□□□□ -0.52
SMARCA2-239ENST00000635388 MTFR1Q15390 333 aa11.82□□□□□ -0.52
SMARCA2-239ENST00000635388 ESCO1Q5FWF5 840 aa11.82□□□□□ -0.52
SMARCA2-239ENST00000635388 TNS4Q8IZW8 715 aa11.82□□□□□ -0.52
SMARCA2-239ENST00000635388 HINFPQ9BQA5 517 aa11.82□□□□□ -0.52
SMARCA2-239ENST00000635388 A0A1W2PRU2 124 aa11.81□□□□□ -0.52
SMARCA2-239ENST00000635388 SCNN1AP37088 669 aa11.81□□□□□ -0.52
SMARCA2-239ENST00000635388 CLN3Q13286 438 aa11.81□□□□□ -0.52
SMARCA2-239ENST00000635388 TAS1R3Q7RTX0 852 aa11.81□□□□□ -0.52
SMARCA2-239ENST00000635388 SOGA1O94964 1423 aa11.8□□□□□ -0.52
SMARCA2-239ENST00000635388 C21orf2O43822 256 aa11.8□□□□□ -0.52
SMARCA2-239ENST00000635388 CNKSR1Q969H4 720 aa11.8□□□□□ -0.52
SMARCA2-239ENST00000635388 PURBQ96QR8 312 aaKnown RBP11.8□□□□□ -0.52
SMARCA2-239ENST00000635388 ESYT1Q9BSJ8 1104 aa11.8□□□□□ -0.52
SMARCA2-239ENST00000635388 PDZRN3Q9UPQ7 1066 aa11.8□□□□□ -0.52
SMARCA2-239ENST00000635388 IVNS1ABPQ9Y6Y0 642 aa11.8□□□□□ -0.52
SMARCA2-239ENST00000635388 AQRO60306 1485 aaKnown RBP eCLIP11.8□□□□□ -0.52
SMARCA2-239ENST00000635388 BIVM-ERCC5R4GMW8 1640 aa11.79□□□□□ -0.52
SMARCA2-239ENST00000635388 FHDC1Q9C0D6 1143 aaPredicted RBP11.79□□□□□ -0.52
SMARCA2-239ENST00000635388 TSPAN10Q9H1Z9 355 aaPredicted RBP11.79□□□□□ -0.52
SMARCA2-239ENST00000635388 SCHIP1Q9P0W5 487 aaPredicted RBP11.79□□□□□ -0.52
SMARCA2-239ENST00000635388 USP3Q9Y6I4 520 aa11.79□□□□□ -0.52
SMARCA2-239ENST00000635388 PBRM1Q86U86 1689 aa11.78□□□□□ -0.52
SMARCA2-239ENST00000635388 A6NJY4 79 aa11.78□□□□□ -0.52
SMARCA2-239ENST00000635388 IGFBP4P22692 258 aa11.78□□□□□ -0.52
SMARCA2-239ENST00000635388 SMTNP53814 917 aa11.78□□□□□ -0.52
SMARCA2-239ENST00000635388 RELBQ01201 579 aa11.78□□□□□ -0.52
SMARCA2-239ENST00000635388 FKBP5Q13451 457 aaPredicted RBP11.78□□□□□ -0.52
SMARCA2-239ENST00000635388 IQSEC3Q9UPP2 1182 aaPredicted RBP11.78□□□□□ -0.52
SMARCA2-239ENST00000635388 AVPP01185 164 aa11.77□□□□□ -0.53
SMARCA2-239ENST00000635388 GAS2L2Q8NHY3 880 aa11.77□□□□□ -0.53
SMARCA2-239ENST00000635388 TOP2BQ02880 1626 aa11.77□□□□□ -0.53
SMARCA2-239ENST00000635388 SYNJ1O43426 1573 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms