RNA–Protein interactions for RNA: ENST00000635273.1

SMARCA2-238, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-238	ENST00000635273	EMID1	Q96A84	441 aa	Predicted RBP	11	□□□□□ -0.65
SMARCA2-238	ENST00000635273	CD2BP2	O95400	341 aa	Known RBP	10.99	□□□□□ -0.65
SMARCA2-238	ENST00000635273	ERCC3	P19447	782 aa		10.99	□□□□□ -0.65
SMARCA2-238	ENST00000635273	GRM5	P41594	1212 aa		10.99	□□□□□ -0.65
SMARCA2-238	ENST00000635273	OSBPL3	Q9H4L5	887 aa		10.99	□□□□□ -0.65
SMARCA2-238	ENST00000635273	TMPRSS4	Q9NRS4	437 aa		10.99	□□□□□ -0.65
SMARCA2-238	ENST00000635273	ICMT	O60725	284 aa		10.98	□□□□□ -0.65
SMARCA2-238	ENST00000635273	SCNN1D	P51172	638 aa		10.98	□□□□□ -0.65
SMARCA2-238	ENST00000635273	MARS	P56192	900 aa	Known RBP	10.98	□□□□□ -0.65
SMARCA2-238	ENST00000635273	FKBP5	Q13451	457 aa	Predicted RBP	10.98	□□□□□ -0.65
SMARCA2-238	ENST00000635273	NOM1	Q5C9Z4	860 aa	Known RBP	10.98	□□□□□ -0.65
SMARCA2-238	ENST00000635273	PURB	Q96QR8	312 aa	Known RBP	10.98	□□□□□ -0.65
SMARCA2-238	ENST00000635273	SEPT3	Q9UH03	358 aa		10.98	□□□□□ -0.65
SMARCA2-238	ENST00000635273	FSHR	P23945	695 aa		10.97	□□□□□ -0.65
SMARCA2-238	ENST00000635273	ZNF211	Q13398	564 aa	Predicted RBP	10.97	□□□□□ -0.65
SMARCA2-238	ENST00000635273	CAPN12	Q6ZSI9	719 aa		10.97	□□□□□ -0.65
SMARCA2-238	ENST00000635273	GTF3C2	Q8WUA4	911 aa	Predicted RBP	10.97	□□□□□ -0.65
SMARCA2-238	ENST00000635273	MKNK1	Q9BUB5	465 aa		10.97	□□□□□ -0.65
SMARCA2-238	ENST00000635273	ANO2	Q9NQ90	1003 aa		10.97	□□□□□ -0.65
SMARCA2-238	ENST00000635273	CYLD	Q9NQC7	956 aa		10.97	□□□□□ -0.65
SMARCA2-238	ENST00000635273	STAU1	O95793	577 aa	Known RBP	10.96	□□□□□ -0.65
SMARCA2-238	ENST00000635273	DHX9	Q08211	1270 aa	Known RBP	10.96	□□□□□ -0.65
SMARCA2-238	ENST00000635273	MPND	Q8N594	471 aa		10.96	□□□□□ -0.65
SMARCA2-238	ENST00000635273	GAS2L2	Q8NHY3	880 aa		10.96	□□□□□ -0.65
SMARCA2-238	ENST00000635273	TRIM52	Q96A61	297 aa		10.96	□□□□□ -0.65
SMARCA2-238	ENST00000635273	GMPR2	Q9P2T1	348 aa	Known RBP	10.96	□□□□□ -0.65
SMARCA2-238	ENST00000635273	RBM47	A0AV96	593 aa	Known RBP	10.95	□□□□□ -0.66
SMARCA2-238	ENST00000635273		H3BRB1	525 aa		10.95	□□□□□ -0.66
SMARCA2-238	ENST00000635273	WASL	O00401	505 aa	Predicted RBP	10.95	□□□□□ -0.66
SMARCA2-238	ENST00000635273	SIAH2	O43255	324 aa		10.95	□□□□□ -0.66
SMARCA2-238	ENST00000635273	GDF10	P55107	478 aa		10.95	□□□□□ -0.66
SMARCA2-238	ENST00000635273	ZNF784	Q8NCA9	323 aa	Predicted RBP	10.95	□□□□□ -0.66
SMARCA2-238	ENST00000635273	TUT1	Q9H6E5	874 aa	Known RBP	10.95	□□□□□ -0.66
SMARCA2-238	ENST00000635273	TLL2	Q9Y6L7	1015 aa		10.95	□□□□□ -0.66
SMARCA2-238	ENST00000635273	BACH1	O14867	736 aa		10.94	□□□□□ -0.66
SMARCA2-238	ENST00000635273	AXIN1	O15169	862 aa		10.94	□□□□□ -0.66
SMARCA2-238	ENST00000635273	PTCD1	O75127	700 aa	Known RBP	10.94	□□□□□ -0.66
SMARCA2-238	ENST00000635273	IGFBP4	P22692	258 aa		10.94	□□□□□ -0.66
SMARCA2-238	ENST00000635273	LIAT1	Q6ZQX7	453 aa		10.94	□□□□□ -0.66
SMARCA2-238	ENST00000635273	GLYCTK	Q8IVS8	523 aa		10.94	□□□□□ -0.66
SMARCA2-238	ENST00000635273	TNS4	Q8IZW8	715 aa		10.94	□□□□□ -0.66
SMARCA2-238	ENST00000635273	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	10.94	□□□□□ -0.66
SMARCA2-238	ENST00000635273	LILRA1	O75019	489 aa		10.93	□□□□□ -0.66
SMARCA2-238	ENST00000635273	CTC1	Q2NKJ3	1217 aa		10.93	□□□□□ -0.66
SMARCA2-238	ENST00000635273	COL26A1	Q96A83	441 aa		10.93	□□□□□ -0.66
SMARCA2-238	ENST00000635273	C21orf2	O43822	256 aa		10.92	□□□□□ -0.66
SMARCA2-238	ENST00000635273	INHA	P05111	366 aa		10.92	□□□□□ -0.66
SMARCA2-238	ENST00000635273	FKBP4	Q02790	459 aa	Known RBP eCLIP	10.92	□□□□□ -0.66
SMARCA2-238	ENST00000635273	ECM1	Q16610	540 aa		10.92	□□□□□ -0.66
SMARCA2-238	ENST00000635273	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	10.92	□□□□□ -0.66
SMARCA2-238	ENST00000635273	CCDC116	Q8IYX3	515 aa		10.92	□□□□□ -0.66
SMARCA2-238	ENST00000635273	SCG3	Q8WXD2	468 aa	Known RBP	10.92	□□□□□ -0.66
SMARCA2-238	ENST00000635273	ETNK1	Q9HBU6	452 aa		10.92	□□□□□ -0.66
SMARCA2-238	ENST00000635273	SERTAD1	Q9UHV2	236 aa		10.92	□□□□□ -0.66
SMARCA2-238	ENST00000635273	UNCX	A6NJT0	531 aa		10.91	□□□□□ -0.66
SMARCA2-238	ENST00000635273	FOXO3	O43524	673 aa		10.91	□□□□□ -0.66
SMARCA2-238	ENST00000635273	ADH1C	P00326	375 aa		10.91	□□□□□ -0.66
SMARCA2-238	ENST00000635273	EPHA4	P54764	986 aa		10.91	□□□□□ -0.66
SMARCA2-238	ENST00000635273	NR5A1	Q13285	461 aa		10.91	□□□□□ -0.66
SMARCA2-238	ENST00000635273	SF3B2	Q13435	895 aa	Known RBP	10.91	□□□□□ -0.66
SMARCA2-238	ENST00000635273	ATAD2	Q6PL18	1390 aa		10.9	□□□□□ -0.66
SMARCA2-238	ENST00000635273	AVP	P01185	164 aa		10.9	□□□□□ -0.66
SMARCA2-238	ENST00000635273	MTMR3	Q13615	1198 aa		10.9	□□□□□ -0.66
SMARCA2-238	ENST00000635273	NAA30	Q147X3	362 aa	Predicted RBP	10.9	□□□□□ -0.66
SMARCA2-238	ENST00000635273	CYP2U1	Q7Z449	544 aa		10.9	□□□□□ -0.66
SMARCA2-238	ENST00000635273	SLC4A9	Q96Q91	983 aa		10.9	□□□□□ -0.66
SMARCA2-238	ENST00000635273	ANKRD33B	A6NCL7	494 aa		10.89	□□□□□ -0.67
SMARCA2-238	ENST00000635273	GNRH1	P01148	92 aa		10.89	□□□□□ -0.67
SMARCA2-238	ENST00000635273	SUZ12	Q15022	739 aa	Known RBP	10.89	□□□□□ -0.67
SMARCA2-238	ENST00000635273	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	10.89	□□□□□ -0.67
SMARCA2-238	ENST00000635273	DACH1	Q9UI36	760 aa		10.89	□□□□□ -0.67
SMARCA2-238	ENST00000635273	WNT7A	O00755	349 aa		10.88	□□□□□ -0.67
SMARCA2-238	ENST00000635273	TERT	O14746	1132 aa	Known RBP	10.88	□□□□□ -0.67
SMARCA2-238	ENST00000635273	NR3C2	P08235	984 aa		10.88	□□□□□ -0.67
SMARCA2-238	ENST00000635273	ADD1	P35611	737 aa	Known RBP	10.88	□□□□□ -0.67
SMARCA2-238	ENST00000635273	ARHGAP4	P98171	946 aa		10.88	□□□□□ -0.67
SMARCA2-238	ENST00000635273	NPAS4	Q8IUM7	802 aa		10.87	□□□□□ -0.67
SMARCA2-238	ENST00000635273	HELQ	Q8TDG4	1101 aa		10.87	□□□□□ -0.67
SMARCA2-238	ENST00000635273	MRGPRX2	Q96LB1	330 aa		10.87	□□□□□ -0.67
SMARCA2-238	ENST00000635273	BCL2L13	Q9BXK5	485 aa		10.87	□□□□□ -0.67
SMARCA2-238	ENST00000635273	ABCC9	O60706	1549 aa		10.86	□□□□□ -0.67
SMARCA2-238	ENST00000635273	FOXK2	Q01167	660 aa		10.86	□□□□□ -0.67
SMARCA2-238	ENST00000635273	ESCO1	Q5FWF5	840 aa		10.86	□□□□□ -0.67
SMARCA2-238	ENST00000635273	CHMP7	Q8WUX9	453 aa	Predicted RBP	10.86	□□□□□ -0.67
SMARCA2-238	ENST00000635273		A0A1W2PRU2	124 aa		10.85	□□□□□ -0.67
SMARCA2-238	ENST00000635273	ZNF16	P17020	682 aa	Predicted RBP	10.85	□□□□□ -0.67
SMARCA2-238	ENST00000635273	MAPK1	P28482	360 aa		10.85	□□□□□ -0.67
SMARCA2-238	ENST00000635273	FOXC1	Q12948	553 aa		10.85	□□□□□ -0.67
SMARCA2-238	ENST00000635273	PGPEP1	Q9NXJ5	209 aa		10.85	□□□□□ -0.67
SMARCA2-238	ENST00000635273	SCHIP1	Q9P0W5	487 aa	Predicted RBP	10.85	□□□□□ -0.67
SMARCA2-238	ENST00000635273	DCTN4	Q9UJW0	460 aa		10.85	□□□□□ -0.67
SMARCA2-238	ENST00000635273		A6NJY4	79 aa		10.84	□□□□□ -0.67
SMARCA2-238	ENST00000635273	SMCP	P49901	116 aa	Predicted RBP	10.84	□□□□□ -0.67
SMARCA2-238	ENST00000635273	VTI1A	Q96AJ9	217 aa		10.84	□□□□□ -0.67
SMARCA2-238	ENST00000635273	RAB6B	Q9NRW1	208 aa		10.84	□□□□□ -0.67
SMARCA2-238	ENST00000635273	EMILIN1	Q9Y6C2	1016 aa		10.84	□□□□□ -0.67
SMARCA2-238	ENST00000635273	PPP1R12B	O60237	982 aa	Predicted RBP	10.83	□□□□□ -0.68
SMARCA2-238	ENST00000635273	NPR3	P17342	541 aa		10.83	□□□□□ -0.68
SMARCA2-238	ENST00000635273	SMTN	P53814	917 aa		10.83	□□□□□ -0.68
SMARCA2-238	ENST00000635273	MTFR1	Q15390	333 aa		10.83	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms