RNA–Protein interactions for RNA: ENST00000635227.1

LINC01108-202, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 3 BASIC

Gene LINC01108, Length 776 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-202ENST00000635227 TTLL8A6PVC2 850 aa12.43□□□□□ -0.42
LINC01108-202ENST00000635227 USP17L15C9J2P7 530 aa12.43□□□□□ -0.42
LINC01108-202ENST00000635227 USP17L10C9JJH3 530 aa12.43□□□□□ -0.42
LINC01108-202ENST00000635227 USP17L13C9JLJ4 530 aa12.43□□□□□ -0.42
LINC01108-202ENST00000635227 USP17L12C9JPN9 530 aa12.43□□□□□ -0.42
LINC01108-202ENST00000635227 USP17L11C9JVI0 530 aa12.43□□□□□ -0.42
LINC01108-202ENST00000635227 USP17L21D6R901 530 aa12.43□□□□□ -0.42
LINC01108-202ENST00000635227 USP17L18D6R9N7 530 aa12.43□□□□□ -0.42
LINC01108-202ENST00000635227 USP17L22D6RA61 530 aa12.43□□□□□ -0.42
LINC01108-202ENST00000635227 USP17L17D6RBQ6 530 aa12.43□□□□□ -0.42
LINC01108-202ENST00000635227 USP17L19D6RCP7 530 aa12.43□□□□□ -0.42
LINC01108-202ENST00000635227 USP17L20D6RJB6 530 aa12.43□□□□□ -0.42
LINC01108-202ENST00000635227 DKK1O94907 266 aa12.43□□□□□ -0.42
LINC01108-202ENST00000635227 SNRPBP14678 240 aaKnown RBP12.43□□□□□ -0.42
LINC01108-202ENST00000635227 USP17L24Q0WX57 530 aa12.43□□□□□ -0.42
LINC01108-202ENST00000635227 ESCO1Q5FWF5 840 aa12.43□□□□□ -0.42
LINC01108-202ENST00000635227 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.43□□□□□ -0.42
LINC01108-202ENST00000635227 PBXIP1Q96AQ6 731 aa12.43□□□□□ -0.42
LINC01108-202ENST00000635227 NLRP3Q96P20 1036 aa12.43□□□□□ -0.42
LINC01108-202ENST00000635227 HRH3Q9Y5N1 445 aa12.43□□□□□ -0.42
LINC01108-202ENST00000635227 FAM196BA6NMK8 535 aa12.42□□□□□ -0.42
LINC01108-202ENST00000635227 SOBPA7XYQ1 873 aa12.42□□□□□ -0.42
LINC01108-202ENST00000635227 SIX5Q8N196 739 aa12.42□□□□□ -0.42
LINC01108-202ENST00000635227 SERTAD1Q9UHV2 236 aa12.42□□□□□ -0.42
LINC01108-202ENST00000635227 DNMT3LQ9UJW3 386 aa12.42□□□□□ -0.42
LINC01108-202ENST00000635227 FIGNL2A6NMB9 653 aa12.41□□□□□ -0.42
LINC01108-202ENST00000635227 C11orf95C9JLR9 678 aaPredicted RBP12.41□□□□□ -0.42
LINC01108-202ENST00000635227 WASLO00401 505 aaPredicted RBP12.41□□□□□ -0.42
LINC01108-202ENST00000635227 RNF144AP50876 292 aaPredicted RBP12.41□□□□□ -0.42
LINC01108-202ENST00000635227 RNF217Q8TC41 542 aa12.41□□□□□ -0.42
LINC01108-202ENST00000635227 KIFC2Q96AC6 838 aa12.41□□□□□ -0.42
LINC01108-202ENST00000635227 ZNF358Q9NW07 568 aa12.41□□□□□ -0.42
LINC01108-202ENST00000635227 CENPCQ03188 943 aa12.4□□□□□ -0.42
LINC01108-202ENST00000635227 SFI1A8K8P3 1242 aa12.39□□□□□ -0.43
LINC01108-202ENST00000635227 MAN1A2O60476 641 aa12.38□□□□□ -0.43
LINC01108-202ENST00000635227 DPYDQ12882 1025 aa12.38□□□□□ -0.43
LINC01108-202ENST00000635227 ANKMY2Q8IV38 441 aa12.38□□□□□ -0.43
LINC01108-202ENST00000635227 ARXQ96QS3 562 aa12.38□□□□□ -0.43
LINC01108-202ENST00000635227 FHDC1Q9C0D6 1143 aaPredicted RBP12.38□□□□□ -0.43
LINC01108-202ENST00000635227 GPC1P35052 558 aa12.37□□□□□ -0.43
LINC01108-202ENST00000635227 TLR1Q15399 786 aa12.37□□□□□ -0.43
LINC01108-202ENST00000635227 GRIP2Q9C0E4 1043 aa12.37□□□□□ -0.43
LINC01108-202ENST00000635227 ATG7O95352 703 aa12.36□□□□□ -0.43
LINC01108-202ENST00000635227 SLC27A3Q5K4L6 730 aa12.36□□□□□ -0.43
LINC01108-202ENST00000635227 ZNF787Q6DD87 383 aa12.36□□□□□ -0.43
LINC01108-202ENST00000635227 SLC4A9Q96Q91 983 aa12.36□□□□□ -0.43
LINC01108-202ENST00000635227 ZMIZ1Q9ULJ6 1067 aa12.36□□□□□ -0.43
LINC01108-202ENST00000635227 NOVA2Q9UNW9 492 aaKnown RBP12.36□□□□□ -0.43
LINC01108-202ENST00000635227 SMTNP53814 917 aa12.35□□□□□ -0.43
LINC01108-202ENST00000635227 SEC13P55735 322 aa12.35□□□□□ -0.43
LINC01108-202ENST00000635227 PRICKLE2Q7Z3G6 844 aa12.35□□□□□ -0.43
LINC01108-202ENST00000635227 RBM19Q9Y4C8 960 aaKnown RBP12.35□□□□□ -0.43
LINC01108-202ENST00000635227 BACH1O14867 736 aa12.34□□□□□ -0.43
LINC01108-202ENST00000635227 PPP1R15AO75807 674 aaPredicted RBP12.34□□□□□ -0.43
LINC01108-202ENST00000635227 LYSMD3Q7Z3D4 306 aa12.34□□□□□ -0.43
LINC01108-202ENST00000635227 TNS4Q8IZW8 715 aa12.34□□□□□ -0.43
LINC01108-202ENST00000635227 TSEN2Q8NCE0 465 aaKnown RBP12.34□□□□□ -0.43
LINC01108-202ENST00000635227 ZSCAN10Q96SZ4 725 aaPredicted RBP12.34□□□□□ -0.43
LINC01108-202ENST00000635227 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.33□□□□□ -0.44
LINC01108-202ENST00000635227 USP3Q9Y6I4 520 aa12.33□□□□□ -0.44
LINC01108-202ENST00000635227 A6NJY4 79 aa12.32□□□□□ -0.44
LINC01108-202ENST00000635227 EPHA4P54764 986 aa12.32□□□□□ -0.44
LINC01108-202ENST00000635227 ELOAQ14241 798 aaKnown RBP12.32□□□□□ -0.44
LINC01108-202ENST00000635227 MTFR1Q15390 333 aa12.32□□□□□ -0.44
LINC01108-202ENST00000635227 FAM200AQ8TCP9 573 aa12.32□□□□□ -0.44
LINC01108-202ENST00000635227 STK32AQ8WU08 396 aa12.32□□□□□ -0.44
LINC01108-202ENST00000635227 LGR5O75473 907 aa12.31□□□□□ -0.44
LINC01108-202ENST00000635227 RHOQP17081 205 aa12.31□□□□□ -0.44
LINC01108-202ENST00000635227 M0R2N6 131 aa12.3□□□□□ -0.44
LINC01108-202ENST00000635227 POU4F2Q12837 409 aa12.3□□□□□ -0.44
LINC01108-202ENST00000635227 SCHIP1Q9P0W5 487 aaPredicted RBP12.3□□□□□ -0.44
LINC01108-202ENST00000635227 IQSEC3Q9UPP2 1182 aaPredicted RBP12.3□□□□□ -0.44
LINC01108-202ENST00000635227 TMEM214Q6NUQ4 689 aaKnown RBP12.29□□□□□ -0.44
LINC01108-202ENST00000635227 PPARGC1BQ86YN6 1023 aaKnown RBP12.29□□□□□ -0.44
LINC01108-202ENST00000635227 SPATA31C2B4DYI2 1134 aa12.28□□□□□ -0.44
LINC01108-202ENST00000635227 FOXK2Q01167 660 aa12.28□□□□□ -0.44
LINC01108-202ENST00000635227 TBCELQ5QJ74 424 aa12.28□□□□□ -0.44
LINC01108-202ENST00000635227 TMEM164Q5U3C3 297 aa12.28□□□□□ -0.44
LINC01108-202ENST00000635227 CDK2AP1O14519 115 aa12.27□□□□□ -0.45
LINC01108-202ENST00000635227 NBPF10Q6P3W6 841 aaKnown RBP12.27□□□□□ -0.45
LINC01108-202ENST00000635227 NBPF15Q8N660 670 aa12.27□□□□□ -0.45
LINC01108-202ENST00000635227 HINFPQ9BQA5 517 aa12.27□□□□□ -0.45
LINC01108-202ENST00000635227 PHKA2P46019 1235 aa12.26□□□□□ -0.45
LINC01108-202ENST00000635227 PTSQ03393 145 aa12.26□□□□□ -0.45
LINC01108-202ENST00000635227 FAM69CQ0P6D2 419 aa12.26□□□□□ -0.45
LINC01108-202ENST00000635227 C4orf17Q53FE4 359 aa12.26□□□□□ -0.45
LINC01108-202ENST00000635227 SLC9A9Q8IVB4 645 aa12.26□□□□□ -0.45
LINC01108-202ENST00000635227 ZNF295-AS1Q8N0V1 137 aa12.26□□□□□ -0.45
LINC01108-202ENST00000635227 RHBDD1Q8TEB9 315 aa12.26□□□□□ -0.45
LINC01108-202ENST00000635227 TSPAN10Q9H1Z9 355 aaPredicted RBP12.26□□□□□ -0.45
LINC01108-202ENST00000635227 ACIN1Q9UKV3 1341 aaKnown RBP12.26□□□□□ -0.45
LINC01108-202ENST00000635227 SENP3-EIF4A1A0A087X0R7 540 aa12.25□□□□□ -0.45
LINC01108-202ENST00000635227 GTF2E1P29083 439 aaPredicted RBP12.25□□□□□ -0.45
LINC01108-202ENST00000635227 GNASQ5JWF2 1037 aa12.25□□□□□ -0.45
LINC01108-202ENST00000635227 TAS1R3Q7RTX0 852 aa12.25□□□□□ -0.45
LINC01108-202ENST00000635227 GAS2L2Q8NHY3 880 aa12.23□□□□□ -0.45
LINC01108-202ENST00000635227 C21orf2O43822 256 aa12.22□□□□□ -0.45
LINC01108-202ENST00000635227 NIFKQ9BYG3 293 aaKnown RBP12.22□□□□□ -0.45
LINC01108-202ENST00000635227 CABP1Q9NZU7 370 aa12.22□□□□□ -0.45
LINC01108-202ENST00000635227 SLC35F4A4IF30 521 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 294 ms