RNA–Protein interactions for RNA: ENST00000633646.1

GRAMD1B-213, Transcript of GRAM domain containing 1B, humanhuman

TSL 3

Gene GRAMD1B, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-213ENST00000633646 SLC4A9Q96Q91 983 aa22.72■■□□□ 1.23
GRAMD1B-213ENST00000633646 C4BP0C0L5 1744 aa22.71■■□□□ 1.23
GRAMD1B-213ENST00000633646 ATP6V1AP38606 617 aa22.71■■□□□ 1.23
GRAMD1B-213ENST00000633646 SLC16A10Q8TF71 515 aa22.71■■□□□ 1.23
GRAMD1B-213ENST00000633646 MSH5O43196 834 aa22.7■■□□□ 1.22
GRAMD1B-213ENST00000633646 CFAP53Q96M91 514 aa22.7■■□□□ 1.22
GRAMD1B-213ENST00000633646 RBM42Q9BTD8 480 aaKnown RBP22.68■■□□□ 1.22
GRAMD1B-213ENST00000633646 SCN11AQ9UI33 1791 aa22.68■■□□□ 1.22
GRAMD1B-213ENST00000633646 RNMTO43148 476 aaKnown RBP22.67■■□□□ 1.22
GRAMD1B-213ENST00000633646 DDX10Q13206 875 aaKnown RBP22.67■■□□□ 1.22
GRAMD1B-213ENST00000633646 AK7Q96M32 723 aa22.67■■□□□ 1.22
GRAMD1B-213ENST00000633646 ARXQ96QS3 562 aa22.67■■□□□ 1.22
GRAMD1B-213ENST00000633646 FHDC1Q9C0D6 1143 aaPredicted RBP22.67■■□□□ 1.22
GRAMD1B-213ENST00000633646 RSPH6AQ9H0K4 717 aa22.66■■□□□ 1.22
GRAMD1B-213ENST00000633646 PTCD1O75127 700 aaKnown RBP22.65■■□□□ 1.22
GRAMD1B-213ENST00000633646 PHF14O94880 888 aa22.65■■□□□ 1.22
GRAMD1B-213ENST00000633646 PHACTR3Q96KR7 559 aa22.65■■□□□ 1.22
GRAMD1B-213ENST00000633646 SYT17Q9BSW7 474 aa22.65■■□□□ 1.22
GRAMD1B-213ENST00000633646 SLC52A2Q9HAB3 445 aa22.65■■□□□ 1.22
GRAMD1B-213ENST00000633646 COL24A1Q17RW2 1714 aa22.65■■□□□ 1.22
GRAMD1B-213ENST00000633646 HMGB2P26583 209 aaKnown RBP22.64■■□□□ 1.21
GRAMD1B-213ENST00000633646 PRKAR2BP31323 418 aa22.64■■□□□ 1.21
GRAMD1B-213ENST00000633646 MSL1Q68DK7 614 aa22.64■■□□□ 1.21
GRAMD1B-213ENST00000633646 UBR3Q6ZT12 1888 aa22.63■■□□□ 1.21
GRAMD1B-213ENST00000633646 NUDCQ9Y266 331 aa22.63■■□□□ 1.21
GRAMD1B-213ENST00000633646 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.62■■□□□ 1.21
GRAMD1B-213ENST00000633646 GNPATO15228 680 aa22.62■■□□□ 1.21
GRAMD1B-213ENST00000633646 U2AF1L5P0DN76 240 aaPredicted RBP22.62■■□□□ 1.21
GRAMD1B-213ENST00000633646 U2AF1Q01081 240 aaKnown RBP eCLIP22.62■■□□□ 1.21
GRAMD1B-213ENST00000633646 FLAD1Q8NFF5 587 aa22.62■■□□□ 1.21
GRAMD1B-213ENST00000633646 ADAMTS7Q9UKP4 1686 aa22.62■■□□□ 1.21
GRAMD1B-213ENST00000633646 POLD1P28340 1107 aa22.61■■□□□ 1.21
GRAMD1B-213ENST00000633646 SLC39A6Q13433 755 aa22.61■■□□□ 1.21
GRAMD1B-213ENST00000633646 MRC1P22897 1456 aa22.6■■□□□ 1.21
GRAMD1B-213ENST00000633646 VIRMAQ69YN4 1812 aaKnown RBP22.6■■□□□ 1.21
GRAMD1B-213ENST00000633646 IL17REQ8NFR9 667 aa22.6■■□□□ 1.21
GRAMD1B-213ENST00000633646 GAS2L2Q8NHY3 880 aa22.6■■□□□ 1.21
GRAMD1B-213ENST00000633646 ZNF831Q5JPB2 1677 aa22.6■■□□□ 1.21
GRAMD1B-213ENST00000633646 SSFA2P28290 1259 aa22.59■■□□□ 1.21
GRAMD1B-213ENST00000633646 MAP3K5Q99683 1374 aa22.59■■□□□ 1.21
GRAMD1B-213ENST00000633646 GNAT3A8MTJ3 354 aa22.58■■□□□ 1.21
GRAMD1B-213ENST00000633646 COL5A3P25940 1745 aaPredicted RBP22.57■■□□□ 1.2
GRAMD1B-213ENST00000633646 FCHSD2O94868 740 aa22.57■■□□□ 1.2
GRAMD1B-213ENST00000633646 KLHL34Q8N239 644 aa22.57■■□□□ 1.2
GRAMD1B-213ENST00000633646 CNTNAP4Q9C0A0 1308 aa22.56■■□□□ 1.2
GRAMD1B-213ENST00000633646 TJP1Q07157 1748 aa22.55■■□□□ 1.2
GRAMD1B-213ENST00000633646 RC3H1Q5TC82 1133 aaKnown RBP22.55■■□□□ 1.2
GRAMD1B-213ENST00000633646 RTCBQ9Y3I0 505 aaKnown RBP22.55■■□□□ 1.2
GRAMD1B-213ENST00000633646 CRKLP46109 303 aaKnown RBP22.54■■□□□ 1.2
GRAMD1B-213ENST00000633646 DNAJC10Q8IXB1 793 aa22.54■■□□□ 1.2
GRAMD1B-213ENST00000633646 KCPQ6ZWJ8 1503 aa22.53■■□□□ 1.2
GRAMD1B-213ENST00000633646 RPS6KA4O75676 772 aa22.53■■□□□ 1.2
GRAMD1B-213ENST00000633646 RALBP1Q15311 655 aa22.53■■□□□ 1.2
GRAMD1B-213ENST00000633646 TRAPPC3LQ5T215 181 aa22.53■■□□□ 1.2
GRAMD1B-213ENST00000633646 ARHGEF1Q92888 912 aaKnown RBP22.53■■□□□ 1.2
GRAMD1B-213ENST00000633646 MYH14Q7Z406 1995 aaKnown RBP22.52■■□□□ 1.2
GRAMD1B-213ENST00000633646 NLGN2Q8NFZ4 835 aa22.52■■□□□ 1.2
GRAMD1B-213ENST00000633646 CEMIPQ8WUJ3 1361 aa22.51■■□□□ 1.19
GRAMD1B-213ENST00000633646 TEFQ10587 303 aa22.51■■□□□ 1.19
GRAMD1B-213ENST00000633646 CICQ96RK0 1608 aaPredicted RBP22.5■■□□□ 1.19
GRAMD1B-213ENST00000633646 INTS5Q6P9B9 1019 aaKnown RBP22.5■■□□□ 1.19
GRAMD1B-213ENST00000633646 ZEB1P37275 1124 aaPredicted RBP22.49■■□□□ 1.19
GRAMD1B-213ENST00000633646 MCM10Q7L590 875 aa22.49■■□□□ 1.19
GRAMD1B-213ENST00000633646 PLEKHF1Q96S99 279 aa22.49■■□□□ 1.19
GRAMD1B-213ENST00000633646 SIPA1L3O60292 1781 aaPredicted RBP22.48■■□□□ 1.19
GRAMD1B-213ENST00000633646 DCAF8L1A6NGE4 600 aa22.48■■□□□ 1.19
GRAMD1B-213ENST00000633646 CYP19A1P11511 503 aaPredicted RBP22.48■■□□□ 1.19
GRAMD1B-213ENST00000633646 DCTN1Q14203 1278 aa22.48■■□□□ 1.19
GRAMD1B-213ENST00000633646 KCNQ3O43525 872 aa22.47■■□□□ 1.19
GRAMD1B-213ENST00000633646 ADRA2BP18089 450 aa22.47■■□□□ 1.19
GRAMD1B-213ENST00000633646 ZNF790Q6PG37 636 aa22.47■■□□□ 1.19
GRAMD1B-213ENST00000633646 ZNF496Q96IT1 587 aaPredicted RBP22.47■■□□□ 1.19
GRAMD1B-213ENST00000633646 UBR2Q8IWV8 1755 aa22.47■■□□□ 1.19
GRAMD1B-213ENST00000633646 RFC4P35249 363 aa22.46■■□□□ 1.19
GRAMD1B-213ENST00000633646 TTC5Q8N0Z6 440 aa22.46■■□□□ 1.19
GRAMD1B-213ENST00000633646 CCDC87Q9NVE4 849 aa22.46■■□□□ 1.19
GRAMD1B-213ENST00000633646 GYS1P13807 737 aa22.45■■□□□ 1.18
GRAMD1B-213ENST00000633646 VSIG10Q8N0Z9 540 aa22.45■■□□□ 1.18
GRAMD1B-213ENST00000633646 MYBBP1AQ9BQG0 1328 aaKnown RBP22.45■■□□□ 1.18
GRAMD1B-213ENST00000633646 BTBD11A6QL63 1104 aa22.44■■□□□ 1.18
GRAMD1B-213ENST00000633646 C4AP0C0L4 1744 aa22.44■■□□□ 1.18
GRAMD1B-213ENST00000633646 RTF1Q92541 710 aaKnown RBP22.44■■□□□ 1.18
GRAMD1B-213ENST00000633646 SRP68Q9UHB9 627 aaKnown RBP22.44■■□□□ 1.18
GRAMD1B-213ENST00000633646 MMP10P09238 476 aa22.43■■□□□ 1.18
GRAMD1B-213ENST00000633646 ZBTB1Q9Y2K1 713 aa22.43■■□□□ 1.18
GRAMD1B-213ENST00000633646 HEG1Q9ULI3 1381 aa22.42■■□□□ 1.18
GRAMD1B-213ENST00000633646 SOS1Q07889 1333 aaPredicted RBP22.42■■□□□ 1.18
GRAMD1B-213ENST00000633646 NLGN1Q8N2Q7 840 aa22.42■■□□□ 1.18
GRAMD1B-213ENST00000633646 CD2APQ9Y5K6 639 aa22.42■■□□□ 1.18
GRAMD1B-213ENST00000633646 HTATSF1O43719 755 aaKnown RBP22.41■■□□□ 1.18
GRAMD1B-213ENST00000633646 GPR162Q16538 588 aa22.4■■□□□ 1.18
GRAMD1B-213ENST00000633646 PELP1Q8IZL8 1130 aaKnown RBP22.4■■□□□ 1.18
GRAMD1B-213ENST00000633646 PRKRIP1Q9H875 184 aaPredicted RBP22.4■■□□□ 1.18
GRAMD1B-213ENST00000633646 USP42Q9H9J4 1324 aaKnown RBP22.39■■□□□ 1.18
GRAMD1B-213ENST00000633646 NEFMP07197 916 aa22.39■■□□□ 1.17
GRAMD1B-213ENST00000633646 CANXP27824 592 aaKnown RBP22.39■■□□□ 1.17
GRAMD1B-213ENST00000633646 FKBP8Q14318 412 aa22.39■■□□□ 1.17
GRAMD1B-213ENST00000633646 FMNL2Q96PY5 1086 aa22.39■■□□□ 1.17
GRAMD1B-213ENST00000633646 YY1P25490 414 aa22.38■■□□□ 1.17
GRAMD1B-213ENST00000633646 NFE2L2Q16236 605 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms