RNA–Protein interactions for RNA: ENST00000632758.1

LIMS4-203, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best)

Gene LIMS4, Length 1,580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-203ENST00000632758 FANCIQ9NVI1 1328 aa19.23■□□□□ 0.67
LIMS4-203ENST00000632758 BTBD11A6QL63 1104 aa19.22■□□□□ 0.67
LIMS4-203ENST00000632758 KCNQ3O43525 872 aa19.22■□□□□ 0.67
LIMS4-203ENST00000632758 ACSBG1Q96GR2 724 aa19.22■□□□□ 0.67
LIMS4-203ENST00000632758 TSPYL4Q9UJ04 414 aa19.22■□□□□ 0.67
LIMS4-203ENST00000632758 ADAMTS7Q9UKP4 1686 aa19.21■□□□□ 0.67
LIMS4-203ENST00000632758 PRIM1P49642 420 aaKnown RBP19.21■□□□□ 0.67
LIMS4-203ENST00000632758 EXOSC9Q06265 439 aaKnown RBP19.19■□□□□ 0.66
LIMS4-203ENST00000632758 SLC39A6Q13433 755 aa19.19■□□□□ 0.66
LIMS4-203ENST00000632758 KRT27Q7Z3Y8 459 aa19.19■□□□□ 0.66
LIMS4-203ENST00000632758 KCNQ2O43526 872 aa19.19■□□□□ 0.66
LIMS4-203ENST00000632758 PIGBQ92521 554 aa19.19■□□□□ 0.66
LIMS4-203ENST00000632758 SYTL4Q96C24 671 aaPredicted RBP19.19■□□□□ 0.66
LIMS4-203ENST00000632758 SCN11AQ9UI33 1791 aa19.18■□□□□ 0.66
LIMS4-203ENST00000632758 CENPBP07199 599 aaPredicted RBP19.18■□□□□ 0.66
LIMS4-203ENST00000632758 KRT24Q2M2I5 525 aa19.18■□□□□ 0.66
LIMS4-203ENST00000632758 BABAM1Q9NWV8 329 aa19.18■□□□□ 0.66
LIMS4-203ENST00000632758 TMOD3Q9NYL9 352 aa19.18■□□□□ 0.66
LIMS4-203ENST00000632758 RGS12O14924 1447 aa19.17■□□□□ 0.66
LIMS4-203ENST00000632758 MRC1P22897 1456 aa19.17■□□□□ 0.66
LIMS4-203ENST00000632758 ELL2O00472 640 aaPredicted RBP19.16■□□□□ 0.66
LIMS4-203ENST00000632758 TSPYL6Q8N831 410 aa19.16■□□□□ 0.66
LIMS4-203ENST00000632758 C8orf58Q8NAV2 365 aa19.16■□□□□ 0.66
LIMS4-203ENST00000632758 TOGARAM1Q9Y4F4 1720 aa19.16■□□□□ 0.66
LIMS4-203ENST00000632758 PTF1AQ7RTS3 328 aa19.15■□□□□ 0.66
LIMS4-203ENST00000632758 EIF4A1P60842 406 aaKnown RBP19.15■□□□□ 0.66
LIMS4-203ENST00000632758 ZNF790Q6PG37 636 aa19.15■□□□□ 0.66
LIMS4-203ENST00000632758 ASAP1Q9ULH1 1129 aa19.14■□□□□ 0.65
LIMS4-203ENST00000632758 BCL9O00512 1426 aa19.14■□□□□ 0.65
LIMS4-203ENST00000632758 VIRMAQ69YN4 1812 aaKnown RBP19.13■□□□□ 0.65
LIMS4-203ENST00000632758 ATG3Q9NT62 314 aa19.13■□□□□ 0.65
LIMS4-203ENST00000632758 BRWD3Q6RI45 1802 aa19.12■□□□□ 0.65
LIMS4-203ENST00000632758 SIPA1L3O60292 1781 aaPredicted RBP19.11■□□□□ 0.65
LIMS4-203ENST00000632758 FAM196AQ6ZSG2 479 aa19.11■□□□□ 0.65
LIMS4-203ENST00000632758 VAMP4O75379 141 aa19.1■□□□□ 0.65
LIMS4-203ENST00000632758 TWISTNBQ3B726 338 aaPredicted RBP19.1■□□□□ 0.65
LIMS4-203ENST00000632758 TTC5Q8N0Z6 440 aa19.1■□□□□ 0.65
LIMS4-203ENST00000632758 ZNF496Q96IT1 587 aaPredicted RBP19.1■□□□□ 0.65
LIMS4-203ENST00000632758 DOT1LQ8TEK3 1739 aa19.1■□□□□ 0.65
LIMS4-203ENST00000632758 PRAMEF22A3QJZ6 481 aa19.09■□□□□ 0.65
LIMS4-203ENST00000632758 PTCD1O75127 700 aaKnown RBP19.09■□□□□ 0.65
LIMS4-203ENST00000632758 KAT6BQ8WYB5 2073 aa19.08■□□□□ 0.64
LIMS4-203ENST00000632758 HEG1Q9ULI3 1381 aa19.07■□□□□ 0.64
LIMS4-203ENST00000632758 KDM3BQ7LBC6 1761 aa19.07■□□□□ 0.64
LIMS4-203ENST00000632758 GIGYF1O75420 1035 aaPredicted RBP19.07■□□□□ 0.64
LIMS4-203ENST00000632758 TRIM37O94972 964 aa19.07■□□□□ 0.64
LIMS4-203ENST00000632758 FMNL2Q96PY5 1086 aa19.07■□□□□ 0.64
LIMS4-203ENST00000632758 RCAN3Q9UKA8 241 aa19.07■□□□□ 0.64
LIMS4-203ENST00000632758 ITGB4P16144 1822 aa19.07■□□□□ 0.64
LIMS4-203ENST00000632758 TCERG1O14776 1098 aaKnown RBP19.06■□□□□ 0.64
LIMS4-203ENST00000632758 RBM42Q9BTD8 480 aaKnown RBP19.06■□□□□ 0.64
LIMS4-203ENST00000632758 BCL11BQ9C0K0 894 aaPredicted RBP19.06■□□□□ 0.64
LIMS4-203ENST00000632758 CT47B1P0C2W7 299 aaPredicted RBP19.05■□□□□ 0.64
LIMS4-203ENST00000632758 RARSP54136 660 aaKnown RBP19.05■□□□□ 0.64
LIMS4-203ENST00000632758 NECTIN2Q92692 538 aa19.05■□□□□ 0.64
LIMS4-203ENST00000632758 SLC4A9Q96Q91 983 aa19.05■□□□□ 0.64
LIMS4-203ENST00000632758 BCAR3O75815 825 aa19.04■□□□□ 0.64
LIMS4-203ENST00000632758 EIF2S2P20042 333 aaKnown RBP19.04■□□□□ 0.64
LIMS4-203ENST00000632758 BCL2L13Q9BXK5 485 aa19.04■□□□□ 0.64
LIMS4-203ENST00000632758 KCPQ6ZWJ8 1503 aa19.03■□□□□ 0.64
LIMS4-203ENST00000632758 SNRPA1P09661 255 aaKnown RBP19.03■□□□□ 0.64
LIMS4-203ENST00000632758 SSH1Q8WYL5 1049 aa19.03■□□□□ 0.64
LIMS4-203ENST00000632758 USP16Q9Y5T5 823 aa19.03■□□□□ 0.64
LIMS4-203ENST00000632758 SUPT16HQ9Y5B9 1047 aaKnown RBP19.02■□□□□ 0.64
LIMS4-203ENST00000632758 SMARCC1Q92922 1105 aaPredicted RBP19.02■□□□□ 0.63
LIMS4-203ENST00000632758 PALLDQ8WX93 1383 aa19.01■□□□□ 0.63
LIMS4-203ENST00000632758 PAPPAQ13219 1627 aa19.01■□□□□ 0.63
LIMS4-203ENST00000632758 EP400Q96L91 3159 aa19.01■□□□□ 0.63
LIMS4-203ENST00000632758 HOXB7P09629 217 aa19.01■□□□□ 0.63
LIMS4-203ENST00000632758 NHSQ6T4R5 1651 aa19■□□□□ 0.63
LIMS4-203ENST00000632758 HDGFL1Q5TGJ6 251 aa19■□□□□ 0.63
LIMS4-203ENST00000632758 DNAJC10Q8IXB1 793 aa19■□□□□ 0.63
LIMS4-203ENST00000632758 LOC102724428A0A0B4J2F2 783 aa18.99■□□□□ 0.63
LIMS4-203ENST00000632758 SIK1P57059 783 aa18.99■□□□□ 0.63
LIMS4-203ENST00000632758 SOS1Q07889 1333 aaPredicted RBP18.99■□□□□ 0.63
LIMS4-203ENST00000632758 ALDH1L2Q3SY69 923 aa18.99■□□□□ 0.63
LIMS4-203ENST00000632758 SBF2Q86WG5 1849 aa18.99■□□□□ 0.63
LIMS4-203ENST00000632758 VSIG10Q8N0Z9 540 aa18.99■□□□□ 0.63
LIMS4-203ENST00000632758 ZNF428Q96B54 188 aa18.99■□□□□ 0.63
LIMS4-203ENST00000632758 KCNQ4P56696 695 aa18.98■□□□□ 0.63
LIMS4-203ENST00000632758 CCDC30Q5VVM6 783 aa18.98■□□□□ 0.63
LIMS4-203ENST00000632758 MRPL50Q8N5N7 158 aaKnown RBP18.98■□□□□ 0.63
LIMS4-203ENST00000632758 SMC4Q9NTJ3 1288 aa18.98■□□□□ 0.63
LIMS4-203ENST00000632758 ATP6V1AP38606 617 aa18.98■□□□□ 0.63
LIMS4-203ENST00000632758 UBR2Q8IWV8 1755 aa18.97■□□□□ 0.63
LIMS4-203ENST00000632758 PLIN1O60240 522 aa18.97■□□□□ 0.63
LIMS4-203ENST00000632758 ANXA1P04083 346 aa18.97■□□□□ 0.63
LIMS4-203ENST00000632758 SLC4A2P04920 1241 aa18.97■□□□□ 0.63
LIMS4-203ENST00000632758 ITPK1Q13572 414 aa18.97■□□□□ 0.63
LIMS4-203ENST00000632758 PIP4K2AP48426 406 aaPredicted RBP18.96■□□□□ 0.63
LIMS4-203ENST00000632758 CHPF2Q9P2E5 772 aa18.96■□□□□ 0.63
LIMS4-203ENST00000632758 BTAF1O14981 1849 aa18.96■□□□□ 0.63
LIMS4-203ENST00000632758 APBA3O96018 575 aa18.95■□□□□ 0.62
LIMS4-203ENST00000632758 A1BGP04217 495 aa18.95■□□□□ 0.62
LIMS4-203ENST00000632758 PDIA6Q15084 440 aa18.95■□□□□ 0.62
LIMS4-203ENST00000632758 PROSER3Q2NL68 480 aa18.95■□□□□ 0.62
LIMS4-203ENST00000632758 CYP19A1P11511 503 aaPredicted RBP18.94■□□□□ 0.62
LIMS4-203ENST00000632758 G2E3Q7L622 706 aa18.94■□□□□ 0.62
LIMS4-203ENST00000632758 FRAT1Q92837 279 aaPredicted RBP18.94■□□□□ 0.62
LIMS4-203ENST00000632758 STK31Q9BXU1 1019 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms