RNA–Protein interactions for RNA: ENST00000629137.1

SPTAN1-218, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 479 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-218ENST00000629137 RAPGEF4Q8WZA2 1011 aa12.49□□□□□ -0.41
SPTAN1-218ENST00000629137 TNS1Q9HBL0 1735 aaKnown RBP12.48□□□□□ -0.41
SPTAN1-218ENST00000629137 POTEFA5A3E0 1075 aa12.48□□□□□ -0.41
SPTAN1-218ENST00000629137 TRIM37O94972 964 aa12.48□□□□□ -0.41
SPTAN1-218ENST00000629137 TATP17735 454 aaPredicted RBP12.48□□□□□ -0.41
SPTAN1-218ENST00000629137 FAM196AQ6ZSG2 479 aa12.48□□□□□ -0.41
SPTAN1-218ENST00000629137 PKD1L3Q7Z443 1732 aa12.48□□□□□ -0.41
SPTAN1-218ENST00000629137 SBF2Q86WG5 1849 aa12.47□□□□□ -0.41
SPTAN1-218ENST00000629137 DIAPH1O60610 1272 aaKnown RBP12.47□□□□□ -0.41
SPTAN1-218ENST00000629137 PTF1AQ7RTS3 328 aa12.47□□□□□ -0.41
SPTAN1-218ENST00000629137 ZNF467Q7Z7K2 595 aaPredicted RBP12.47□□□□□ -0.41
SPTAN1-218ENST00000629137 ZCRB1Q8TBF4 217 aaKnown RBP12.47□□□□□ -0.41
SPTAN1-218ENST00000629137 DDX54Q8TDD1 881 aaKnown RBP12.47□□□□□ -0.41
SPTAN1-218ENST00000629137 SULT6B1Q6IMI4 303 aa12.46□□□□□ -0.41
SPTAN1-218ENST00000629137 HMOX1P09601 288 aa12.45□□□□□ -0.42
SPTAN1-218ENST00000629137 POTEJP0CG39 1038 aa12.45□□□□□ -0.42
SPTAN1-218ENST00000629137 DEFB132Q7Z7B7 95 aa12.45□□□□□ -0.42
SPTAN1-218ENST00000629137 BCL9O00512 1426 aa12.45□□□□□ -0.42
SPTAN1-218ENST00000629137 KDRP35968 1356 aa12.44□□□□□ -0.42
SPTAN1-218ENST00000629137 KCNQ2O43526 872 aa12.44□□□□□ -0.42
SPTAN1-218ENST00000629137 RALBP1Q15311 655 aa12.44□□□□□ -0.42
SPTAN1-218ENST00000629137 CCDC125Q86Z20 511 aa12.44□□□□□ -0.42
SPTAN1-218ENST00000629137 ACSBG1Q96GR2 724 aa12.44□□□□□ -0.42
SPTAN1-218ENST00000629137 CFAP53Q96M91 514 aa12.44□□□□□ -0.42
SPTAN1-218ENST00000629137 COLQQ9Y215 455 aaPredicted RBP12.44□□□□□ -0.42
SPTAN1-218ENST00000629137 DOT1LQ8TEK3 1739 aa12.43□□□□□ -0.42
SPTAN1-218ENST00000629137 NHSQ6T4R5 1651 aa12.43□□□□□ -0.42
SPTAN1-218ENST00000629137 U2SURPO15042 1029 aaKnown RBP12.43□□□□□ -0.42
SPTAN1-218ENST00000629137 CYP27B1O15528 508 aa12.43□□□□□ -0.42
SPTAN1-218ENST00000629137 OTUD5Q96G74 571 aa12.43□□□□□ -0.42
SPTAN1-218ENST00000629137 PRKRIP1Q9H875 184 aaPredicted RBP12.43□□□□□ -0.42
SPTAN1-218ENST00000629137 PCDH11XQ9BZA7 1347 aa12.42□□□□□ -0.42
SPTAN1-218ENST00000629137 PCDH11YQ9BZA8 1340 aa12.42□□□□□ -0.42
SPTAN1-218ENST00000629137 SF3B2Q13435 895 aaKnown RBP12.42□□□□□ -0.42
SPTAN1-218ENST00000629137 SPG7Q9UQ90 795 aa12.42□□□□□ -0.42
SPTAN1-218ENST00000629137 TOGARAM1Q9Y4F4 1720 aa12.42□□□□□ -0.42
SPTAN1-218ENST00000629137 MYBBP1AQ9BQG0 1328 aaKnown RBP12.41□□□□□ -0.42
SPTAN1-218ENST00000629137 APBA3O96018 575 aa12.41□□□□□ -0.42
SPTAN1-218ENST00000629137 EN1Q05925 392 aaPredicted RBP12.41□□□□□ -0.42
SPTAN1-218ENST00000629137 PHKG2P15735 406 aa12.4□□□□□ -0.42
SPTAN1-218ENST00000629137 BAG6P46379 1132 aa12.4□□□□□ -0.42
SPTAN1-218ENST00000629137 IER5LQ5T953 404 aa12.4□□□□□ -0.42
SPTAN1-218ENST00000629137 BCL11BQ9C0K0 894 aaPredicted RBP12.4□□□□□ -0.42
SPTAN1-218ENST00000629137 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.4□□□□□ -0.421e-10■□□□□ 10
SPTAN1-218ENST00000629137 SEC24BO95487 1268 aa12.39□□□□□ -0.43
SPTAN1-218ENST00000629137 PSEN1P49768 467 aa12.39□□□□□ -0.43
SPTAN1-218ENST00000629137 EZH2Q15910 746 aaKnown RBP12.39□□□□□ -0.43
SPTAN1-218ENST00000629137 PLEKHO1Q53GL0 409 aaPredicted RBP12.39□□□□□ -0.43
SPTAN1-218ENST00000629137 PLEKHG2Q9H7P9 1386 aa12.39□□□□□ -0.43
SPTAN1-218ENST00000629137 BTAF1O14981 1849 aa12.39□□□□□ -0.43
SPTAN1-218ENST00000629137 U2AF1L5P0DN76 240 aaPredicted RBP12.38□□□□□ -0.43
SPTAN1-218ENST00000629137 PRIM1P49642 420 aaKnown RBP12.38□□□□□ -0.43
SPTAN1-218ENST00000629137 U2AF1Q01081 240 aaKnown RBP eCLIP12.38□□□□□ -0.43
SPTAN1-218ENST00000629137 ZNF530Q6P9A1 599 aaPredicted RBP12.38□□□□□ -0.43
SPTAN1-218ENST00000629137 IFNL2Q8IZJ0 200 aa12.38□□□□□ -0.43
SPTAN1-218ENST00000629137 SYTL4Q96C24 671 aaPredicted RBP12.38□□□□□ -0.43
SPTAN1-218ENST00000629137 CAMKK2Q96RR4 588 aa12.38□□□□□ -0.43
SPTAN1-218ENST00000629137 RSPH6AQ9H0K4 717 aa12.38□□□□□ -0.43
SPTAN1-218ENST00000629137 NUDCQ9Y266 331 aa12.38□□□□□ -0.43
SPTAN1-218ENST00000629137 NKX1-1Q15270 411 aaPredicted RBP12.37□□□□□ -0.43
SPTAN1-218ENST00000629137 MTHFSDQ2M296 383 aaKnown RBP12.37□□□□□ -0.43
SPTAN1-218ENST00000629137 AMOTQ4VCS5 1084 aa12.37□□□□□ -0.43
SPTAN1-218ENST00000629137 RREB1Q92766 1687 aa12.37□□□□□ -0.43
SPTAN1-218ENST00000629137 KDM6AO15550 1401 aaPredicted RBP12.37□□□□□ -0.43
SPTAN1-218ENST00000629137 PRKAR2BP31323 418 aa12.36□□□□□ -0.43
SPTAN1-218ENST00000629137 PHACTR3Q96KR7 559 aa12.36□□□□□ -0.43
SPTAN1-218ENST00000629137 ITGB4P16144 1822 aa12.36□□□□□ -0.43
SPTAN1-218ENST00000629137 RGPD3A6NKT7 1758 aaPredicted RBP12.35□□□□□ -0.43
SPTAN1-218ENST00000629137 RGPD4Q7Z3J3 1758 aa12.35□□□□□ -0.43
SPTAN1-218ENST00000629137 NUP188Q5SRE5 1749 aa12.35□□□□□ -0.43
SPTAN1-218ENST00000629137 PLSCR1O15162 318 aa12.35□□□□□ -0.43
SPTAN1-218ENST00000629137 PDAP1Q13442 181 aaKnown RBP12.35□□□□□ -0.43
SPTAN1-218ENST00000629137 CCDC184Q52MB2 194 aa12.35□□□□□ -0.43
SPTAN1-218ENST00000629137 C1orf141Q5JVX7 400 aa12.34□□□□□ -0.43
SPTAN1-218ENST00000629137 MPRIPQ6WCQ1 1025 aa12.34□□□□□ -0.43
SPTAN1-218ENST00000629137 ANP32CO43423 234 aa12.33□□□□□ -0.44
SPTAN1-218ENST00000629137 FCHSD2O94868 740 aa12.33□□□□□ -0.44
SPTAN1-218ENST00000629137 IRX5P78411 483 aaPredicted RBP12.33□□□□□ -0.44
SPTAN1-218ENST00000629137 AKAP4Q5JQC9 854 aa12.33□□□□□ -0.44
SPTAN1-218ENST00000629137 TXNRD1Q16881 649 aa12.32□□□□□ -0.44
SPTAN1-218ENST00000629137 PIGBQ92521 554 aa12.32□□□□□ -0.44
SPTAN1-218ENST00000629137 DCAF5Q96JK2 942 aa12.32□□□□□ -0.44
SPTAN1-218ENST00000629137 LGR6Q9HBX8 967 aa12.32□□□□□ -0.44
SPTAN1-218ENST00000629137 SCN11AQ9UI33 1791 aa12.32□□□□□ -0.44
SPTAN1-218ENST00000629137 VIRMAQ69YN4 1812 aaKnown RBP12.32□□□□□ -0.44
SPTAN1-218ENST00000629137 ADAMTS7Q9UKP4 1686 aa12.32□□□□□ -0.44
SPTAN1-218ENST00000629137 LY75O60449 1722 aa12.31□□□□□ -0.44
SPTAN1-218ENST00000629137 KAT6BQ8WYB5 2073 aa12.31□□□□□ -0.44
SPTAN1-218ENST00000629137 HSP90AB1P08238 724 aaKnown RBP12.31□□□□□ -0.44
SPTAN1-218ENST00000629137 KCNQ4P56696 695 aa12.31□□□□□ -0.44
SPTAN1-218ENST00000629137 RNF25Q96BH1 459 aaPredicted RBP12.31□□□□□ -0.44
SPTAN1-218ENST00000629137 PLEKHF1Q96S99 279 aa12.31□□□□□ -0.44
SPTAN1-218ENST00000629137 GAS2L2Q8NHY3 880 aa12.3□□□□□ -0.44
SPTAN1-218ENST00000629137 LRRC4BQ9NT99 713 aa12.3□□□□□ -0.44
SPTAN1-218ENST00000629137 TMOD3Q9NYL9 352 aa12.3□□□□□ -0.44
SPTAN1-218ENST00000629137 MAP3K5Q99683 1374 aa12.3□□□□□ -0.44
SPTAN1-218ENST00000629137 ERVV-2B6SEH9 535 aa12.29□□□□□ -0.44
SPTAN1-218ENST00000629137 RNMTO43148 476 aaKnown RBP12.29□□□□□ -0.44
SPTAN1-218ENST00000629137 PLCG2P16885 1265 aa12.29□□□□□ -0.44
SPTAN1-218ENST00000629137 CCDC146Q8IYE0 955 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms