RNA–Protein interactions for RNA: ENST00000629045.1

SCARNA4-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-201ENST00000629045 TRIM50Q86XT4 487 aa4.99□□□□□ -1.61
SCARNA4-201ENST00000629045 CCDC155Q8N6L0 562 aa4.99□□□□□ -1.61
SCARNA4-201ENST00000629045 GRIP2Q9C0E4 1043 aa4.99□□□□□ -1.61
SCARNA4-201ENST00000629045 DNAAF2Q9NVR5 837 aaKnown RBP4.99□□□□□ -1.61
SCARNA4-201ENST00000629045 ZNF358Q9NW07 568 aa4.99□□□□□ -1.61
SCARNA4-201ENST00000629045 USP3Q9Y6I4 520 aa4.99□□□□□ -1.61
SCARNA4-201ENST00000629045 ERBB4Q15303 1308 aa4.98□□□□□ -1.61
SCARNA4-201ENST00000629045 SLC35F4A4IF30 521 aa4.98□□□□□ -1.61
SCARNA4-201ENST00000629045 PPFIA3O75145 1194 aa4.98□□□□□ -1.61
SCARNA4-201ENST00000629045 RASA1P20936 1047 aa4.98□□□□□ -1.61
SCARNA4-201ENST00000629045 PHKA2P46019 1235 aa4.98□□□□□ -1.61
SCARNA4-201ENST00000629045 KANK4Q5T7N3 995 aaPredicted RBP4.98□□□□□ -1.61
SCARNA4-201ENST00000629045 CCDC102BQ68D86 513 aa4.98□□□□□ -1.61
SCARNA4-201ENST00000629045 NBPF10Q6P3W6 841 aaKnown RBP4.98□□□□□ -1.61
SCARNA4-201ENST00000629045 CCDC82Q8N4S0 544 aa4.98□□□□□ -1.61
SCARNA4-201ENST00000629045 NBPF15Q8N660 670 aa4.98□□□□□ -1.61
SCARNA4-201ENST00000629045 ZSCAN10Q96SZ4 725 aaPredicted RBP4.98□□□□□ -1.61
SCARNA4-201ENST00000629045 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.97□□□□□ -1.61
SCARNA4-201ENST00000629045 SFI1A8K8P3 1242 aa4.97□□□□□ -1.61
SCARNA4-201ENST00000629045 USP17L15C9J2P7 530 aa4.97□□□□□ -1.61
SCARNA4-201ENST00000629045 USP17L10C9JJH3 530 aa4.97□□□□□ -1.61
SCARNA4-201ENST00000629045 USP17L13C9JLJ4 530 aa4.97□□□□□ -1.61
SCARNA4-201ENST00000629045 USP17L12C9JPN9 530 aa4.97□□□□□ -1.61
SCARNA4-201ENST00000629045 USP17L11C9JVI0 530 aa4.97□□□□□ -1.61
SCARNA4-201ENST00000629045 USP17L21D6R901 530 aa4.97□□□□□ -1.61
SCARNA4-201ENST00000629045 USP17L18D6R9N7 530 aa4.97□□□□□ -1.61
SCARNA4-201ENST00000629045 USP17L22D6RA61 530 aa4.97□□□□□ -1.61
SCARNA4-201ENST00000629045 USP17L17D6RBQ6 530 aa4.97□□□□□ -1.61
SCARNA4-201ENST00000629045 USP17L19D6RCP7 530 aa4.97□□□□□ -1.61
SCARNA4-201ENST00000629045 USP17L20D6RJB6 530 aa4.97□□□□□ -1.61
SCARNA4-201ENST00000629045 WASLO00401 505 aaPredicted RBP4.97□□□□□ -1.61
SCARNA4-201ENST00000629045 ZBTB7BO15156 539 aaPredicted RBP4.97□□□□□ -1.61
SCARNA4-201ENST00000629045 WFS1O76024 890 aa4.97□□□□□ -1.61
SCARNA4-201ENST00000629045 PLA2G4AP47712 749 aa4.97□□□□□ -1.61
SCARNA4-201ENST00000629045 ATP1A2P50993 1020 aa4.97□□□□□ -1.61
SCARNA4-201ENST00000629045 USP17L24Q0WX57 530 aa4.97□□□□□ -1.61
SCARNA4-201ENST00000629045 C4orf17Q53FE4 359 aa4.97□□□□□ -1.61
SCARNA4-201ENST00000629045 TBCELQ5QJ74 424 aa4.97□□□□□ -1.61
SCARNA4-201ENST00000629045 LCE2AQ5TA79 106 aaPredicted RBP4.97□□□□□ -1.61
SCARNA4-201ENST00000629045 TMEM214Q6NUQ4 689 aaKnown RBP4.97□□□□□ -1.61
SCARNA4-201ENST00000629045 TAS1R3Q7RTX0 852 aa4.97□□□□□ -1.61
SCARNA4-201ENST00000629045 CCDC97Q96F63 343 aaPredicted RBP4.97□□□□□ -1.61
SCARNA4-201ENST00000629045 A6NJY4 79 aa4.96□□□□□ -1.62
SCARNA4-201ENST00000629045 SPATA31C2B4DYI2 1134 aa4.96□□□□□ -1.62
SCARNA4-201ENST00000629045 SUPT5HO00267 1087 aaKnown RBP4.96□□□□□ -1.62
SCARNA4-201ENST00000629045 LGR5O75473 907 aa4.96□□□□□ -1.62
SCARNA4-201ENST00000629045 DKK1O94907 266 aa4.96□□□□□ -1.62
SCARNA4-201ENST00000629045 ITGA6P23229 1130 aa4.96□□□□□ -1.62
SCARNA4-201ENST00000629045 SMTNP53814 917 aa4.96□□□□□ -1.62
SCARNA4-201ENST00000629045 DPYDQ12882 1025 aa4.96□□□□□ -1.62
SCARNA4-201ENST00000629045 GNASQ5JWF2 1037 aa4.96□□□□□ -1.62
SCARNA4-201ENST00000629045 TREML4Q6UXN2 200 aa4.96□□□□□ -1.62
SCARNA4-201ENST00000629045 TNS4Q8IZW8 715 aa4.96□□□□□ -1.62
SCARNA4-201ENST00000629045 SIX5Q8N196 739 aa4.96□□□□□ -1.62
SCARNA4-201ENST00000629045 TSEN2Q8NCE0 465 aaKnown RBP4.96□□□□□ -1.62
SCARNA4-201ENST00000629045 GPAMQ9HCL2 828 aa4.96□□□□□ -1.62
SCARNA4-201ENST00000629045 CUEDC1Q9NWM3 386 aaPredicted RBP4.96□□□□□ -1.62
SCARNA4-201ENST00000629045 IQSEC3Q9UPP2 1182 aaPredicted RBP4.96□□□□□ -1.62
SCARNA4-201ENST00000629045 CDC14CA4D256 554 aa4.95□□□□□ -1.62
SCARNA4-201ENST00000629045 EPHA4P54764 986 aa4.95□□□□□ -1.62
SCARNA4-201ENST00000629045 PTK7Q13308 1070 aa4.95□□□□□ -1.62
SCARNA4-201ENST00000629045 LARP1Q6PKG0 1096 aaKnown RBP4.95□□□□□ -1.62
SCARNA4-201ENST00000629045 PPARGC1BQ86YN6 1023 aaKnown RBP4.95□□□□□ -1.62
SCARNA4-201ENST00000629045 SLC9A9Q8IVB4 645 aa4.95□□□□□ -1.62
SCARNA4-201ENST00000629045 ZNF295-AS1Q8N0V1 137 aa4.95□□□□□ -1.62
SCARNA4-201ENST00000629045 LARGE2Q8N3Y3 721 aa4.95□□□□□ -1.62
SCARNA4-201ENST00000629045 RHBDD1Q8TEB9 315 aa4.95□□□□□ -1.62
SCARNA4-201ENST00000629045 GAS2L1Q99501 681 aaPredicted RBP4.95□□□□□ -1.62
SCARNA4-201ENST00000629045 TIMMDC1Q9NPL8 285 aa4.95□□□□□ -1.62
SCARNA4-201ENST00000629045 GTF2E1P29083 439 aaPredicted RBP4.94□□□□□ -1.62
SCARNA4-201ENST00000629045 MTFR1Q15390 333 aa4.94□□□□□ -1.62
SCARNA4-201ENST00000629045 RIPOR1Q6ZS17 1223 aa4.94□□□□□ -1.62
SCARNA4-201ENST00000629045 NPAS3Q8IXF0 933 aa4.94□□□□□ -1.62
SCARNA4-201ENST00000629045 SLC16A10Q8TF71 515 aa4.94□□□□□ -1.62
SCARNA4-201ENST00000629045 SLC4A9Q96Q91 983 aa4.94□□□□□ -1.62
SCARNA4-201ENST00000629045 TSPAN10Q9H1Z9 355 aaPredicted RBP4.94□□□□□ -1.62
SCARNA4-201ENST00000629045 VRTNQ9H8Y1 702 aa4.94□□□□□ -1.62
SCARNA4-201ENST00000629045 SCHIP1Q9P0W5 487 aaPredicted RBP4.94□□□□□ -1.62
SCARNA4-201ENST00000629045 PARP3Q9Y6F1 533 aa4.94□□□□□ -1.62
SCARNA4-201ENST00000629045 FAM196BA6NMK8 535 aa4.93□□□□□ -1.62
SCARNA4-201ENST00000629045 BACH1O14867 736 aa4.93□□□□□ -1.62
SCARNA4-201ENST00000629045 ATP4AP20648 1035 aa4.93□□□□□ -1.62
SCARNA4-201ENST00000629045 GMPRP36959 345 aa4.93□□□□□ -1.62
SCARNA4-201ENST00000629045 SEC13P55735 322 aa4.93□□□□□ -1.62
SCARNA4-201ENST00000629045 FOXK2Q01167 660 aa4.93□□□□□ -1.62
SCARNA4-201ENST00000629045 SH3PXD2AQ5TCZ1 1133 aa4.93□□□□□ -1.62
SCARNA4-201ENST00000629045 ANKMY2Q8IV38 441 aa4.93□□□□□ -1.62
SCARNA4-201ENST00000629045 VWA5B2Q8N398 1253 aa4.93□□□□□ -1.62
SCARNA4-201ENST00000629045 GPR161Q8N6U8 529 aaKnown RBP4.93□□□□□ -1.62
SCARNA4-201ENST00000629045 GAS2L2Q8NHY3 880 aa4.93□□□□□ -1.62
SCARNA4-201ENST00000629045 ZDHHC1Q8WTX9 485 aa4.93□□□□□ -1.62
SCARNA4-201ENST00000629045 IRF7Q92985 503 aa4.93□□□□□ -1.62
SCARNA4-201ENST00000629045 ZNF837Q96EG3 531 aaPredicted RBP4.93□□□□□ -1.62
SCARNA4-201ENST00000629045 ARXQ96QS3 562 aa4.93□□□□□ -1.62
SCARNA4-201ENST00000629045 RUBCNLQ9H714 662 aa4.93□□□□□ -1.62
SCARNA4-201ENST00000629045 SERPINA10Q9UK55 444 aa4.93□□□□□ -1.62
SCARNA4-201ENST00000629045 ZMIZ1Q9ULJ6 1067 aa4.93□□□□□ -1.62
SCARNA4-201ENST00000629045 DYRK1BQ9Y463 629 aa4.93□□□□□ -1.62
SCARNA4-201ENST00000629045 RBM19Q9Y4C8 960 aaKnown RBP4.93□□□□□ -1.62
SCARNA4-201ENST00000629045 A0A1B0GTH6 734 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms