RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 BOLA2Q9H3K6 86 aa9.2□□□□□ -0.94
PKP4-217ENST00000628904 G3BP1Q13283 466 aaKnown RBP eCLIP9.19□□□□□ -0.94
PKP4-217ENST00000628904 DIAPH3Q9NSV4 1193 aa9.19□□□□□ -0.94
PKP4-217ENST00000628904 COPS6Q7L5N1 327 aa9.19□□□□□ -0.94
PKP4-217ENST00000628904 AACSQ86V21 672 aa9.19□□□□□ -0.94
PKP4-217ENST00000628904 PLEKHM2Q8IWE5 1019 aa9.19□□□□□ -0.94
PKP4-217ENST00000628904 DNAAF4Q8WXU2 420 aa9.19□□□□□ -0.94
PKP4-217ENST00000628904 GOLGA6L22H0YM25 854 aa9.19□□□□□ -0.94
PKP4-217ENST00000628904 CPA1P15085 419 aa9.19□□□□□ -0.94
PKP4-217ENST00000628904 ADRA2BP18089 450 aa9.19□□□□□ -0.94
PKP4-217ENST00000628904 GPTP24298 496 aa9.19□□□□□ -0.94
PKP4-217ENST00000628904 CHMP4CQ96CF2 233 aa9.19□□□□□ -0.94
PKP4-217ENST00000628904 ARHGEF40Q8TER5 1519 aa9.19□□□□□ -0.94
PKP4-217ENST00000628904 CD2BP2O95400 341 aaKnown RBP9.18□□□□□ -0.94
PKP4-217ENST00000628904 UBE3BQ7Z3V4 1068 aa9.18□□□□□ -0.94
PKP4-217ENST00000628904 IP6K1Q92551 441 aa9.18□□□□□ -0.94
PKP4-217ENST00000628904 DDX49Q9Y6V7 483 aaKnown RBP9.18□□□□□ -0.94
PKP4-217ENST00000628904 TTC21AQ8NDW8 1320 aa9.18□□□□□ -0.94
PKP4-217ENST00000628904 GSPT1P15170 499 aaKnown RBP9.18□□□□□ -0.94
PKP4-217ENST00000628904 RPAP2Q8IXW5 612 aaPredicted RBP9.18□□□□□ -0.94
PKP4-217ENST00000628904 C19orf44Q9H6X5 657 aa9.18□□□□□ -0.94
PKP4-217ENST00000628904 USP6P35125 1406 aa9.18□□□□□ -0.94
PKP4-217ENST00000628904 IQGAP1P46940 1657 aa9.18□□□□□ -0.94
PKP4-217ENST00000628904 MX1P20591 662 aa9.18□□□□□ -0.94
PKP4-217ENST00000628904 CLASRPQ8N2M8 674 aaKnown RBP9.18□□□□□ -0.94
PKP4-217ENST00000628904 XAGE3Q8WTP9 111 aa9.18□□□□□ -0.94
PKP4-217ENST00000628904 VWDEQ8N2E2 1590 aa9.18□□□□□ -0.94
PKP4-217ENST00000628904 ANKRD44Q8N8A2 993 aa9.17□□□□□ -0.94
PKP4-217ENST00000628904 PTPRUQ92729 1446 aa9.17□□□□□ -0.94
PKP4-217ENST00000628904 GDPD2Q9HCC8 539 aa9.17□□□□□ -0.94
PKP4-217ENST00000628904 ST18O60284 1047 aa9.17□□□□□ -0.94
PKP4-217ENST00000628904 MCCP23508 829 aa9.17□□□□□ -0.94
PKP4-217ENST00000628904 STK3Q13188 491 aa9.17□□□□□ -0.94
PKP4-217ENST00000628904 CHMP5Q9NZZ3 219 aa9.17□□□□□ -0.94
PKP4-217ENST00000628904 ZFYVE9O95405 1425 aa9.17□□□□□ -0.94
PKP4-217ENST00000628904 SSFA2P28290 1259 aa9.17□□□□□ -0.94
PKP4-217ENST00000628904 USP16Q9Y5T5 823 aa9.17□□□□□ -0.94
PKP4-217ENST00000628904 SIGLEC1Q9BZZ2 1709 aa9.17□□□□□ -0.94
PKP4-217ENST00000628904 LMTK2Q8IWU2 1503 aa9.17□□□□□ -0.94
PKP4-217ENST00000628904 CFAP74Q9C0B2 1584 aa9.17□□□□□ -0.94
PKP4-217ENST00000628904 CD163L1Q9NR16 1453 aa9.16□□□□□ -0.94
PKP4-217ENST00000628904 DDX58O95786 925 aaKnown RBP9.16□□□□□ -0.94
PKP4-217ENST00000628904 ACSBG1Q96GR2 724 aa9.16□□□□□ -0.94
PKP4-217ENST00000628904 REC8O95072 547 aa9.16□□□□□ -0.94
PKP4-217ENST00000628904 ZNF853P0CG23 659 aa9.16□□□□□ -0.94
PKP4-217ENST00000628904 EDC3Q96F86 508 aaKnown RBP9.16□□□□□ -0.94
PKP4-217ENST00000628904 PDE1AP54750 535 aa9.16□□□□□ -0.94
PKP4-217ENST00000628904 FSD1Q9BTV5 496 aa9.16□□□□□ -0.94
PKP4-217ENST00000628904 DCTPP1Q9H773 170 aa9.16□□□□□ -0.94
PKP4-217ENST00000628904 SBNO1A3KN83 1393 aa9.16□□□□□ -0.94
PKP4-217ENST00000628904 PLEKHG1Q9ULL1 1385 aa9.16□□□□□ -0.94
PKP4-217ENST00000628904 NRXN1Q9ULB1 1477 aa9.16□□□□□ -0.94
PKP4-217ENST00000628904 TRAK2O60296 914 aa9.15□□□□□ -0.94
PKP4-217ENST00000628904 BMP2KLQ5H9B9 411 aa9.15□□□□□ -0.94
PKP4-217ENST00000628904 TTC22Q5TAA0 569 aa9.15□□□□□ -0.94
PKP4-217ENST00000628904 UNC5CLQ8IV45 518 aa9.15□□□□□ -0.94
PKP4-217ENST00000628904 ZGPATQ8N5A5 531 aaKnown RBP9.15□□□□□ -0.94
PKP4-217ENST00000628904 RNF214Q8ND24 703 aa9.15□□□□□ -0.94
PKP4-217ENST00000628904 ZNF496Q96IT1 587 aaPredicted RBP9.15□□□□□ -0.94
PKP4-217ENST00000628904 SNRKQ9NRH2 765 aa9.15□□□□□ -0.94
PKP4-217ENST00000628904 A1BGP04217 495 aa9.15□□□□□ -0.94
PKP4-217ENST00000628904 ADAMTS13Q76LX8 1427 aa9.15□□□□□ -0.94
PKP4-217ENST00000628904 POLR1AO95602 1720 aaPredicted RBP9.15□□□□□ -0.94
PKP4-217ENST00000628904 A0A087WZG4 1122 aa9.15□□□□□ -0.95
PKP4-217ENST00000628904 RNMTO43148 476 aaKnown RBP9.15□□□□□ -0.95
PKP4-217ENST00000628904 AAMPQ13685 434 aa9.15□□□□□ -0.95
PKP4-217ENST00000628904 ARHGAP45Q92619 1136 aa9.15□□□□□ -0.95
PKP4-217ENST00000628904 USP44Q9H0E7 712 aa9.15□□□□□ -0.95
PKP4-217ENST00000628904 DBF4Q9UBU7 674 aaPredicted RBP9.15□□□□□ -0.95
PKP4-217ENST00000628904 NLRP1Q9C000 1473 aa9.15□□□□□ -0.95
PKP4-217ENST00000628904 DEPDC5O75140 1603 aa9.14□□□□□ -0.95
PKP4-217ENST00000628904 MAP3K5Q99683 1374 aa9.14□□□□□ -0.95
PKP4-217ENST00000628904 PRPF40AO75400 957 aaKnown RBP9.14□□□□□ -0.95
PKP4-217ENST00000628904 HSP90B1P14625 803 aaKnown RBP9.14□□□□□ -0.95
PKP4-217ENST00000628904 KCNQ4P56696 695 aa9.14□□□□□ -0.95
PKP4-217ENST00000628904 BICDL1Q6ZP65 573 aa9.14□□□□□ -0.95
PKP4-217ENST00000628904 MYO5BQ9ULV0 1848 aa9.14□□□□□ -0.95
PKP4-217ENST00000628904 DIP2BQ9P265 1576 aa9.14□□□□□ -0.95
PKP4-217ENST00000628904 FAM135BQ49AJ0 1406 aa9.14□□□□□ -0.95
PKP4-217ENST00000628904 ERC2O15083 957 aa9.14□□□□□ -0.95
PKP4-217ENST00000628904 GBP4Q96PP9 640 aa9.14□□□□□ -0.95
PKP4-217ENST00000628904 LRRC7Q96NW7 1537 aa9.14□□□□□ -0.95
PKP4-217ENST00000628904 GOLGA6L3A6NEY3 463 aa9.14□□□□□ -0.95
PKP4-217ENST00000628904 HSP90AB3PQ58FF7 597 aa9.14□□□□□ -0.95
PKP4-217ENST00000628904 ANP32BQ92688 251 aaKnown RBP9.14□□□□□ -0.95
PKP4-217ENST00000628904 PTPRCP08575 1304 aa9.13□□□□□ -0.95
PKP4-217ENST00000628904 VPS37CA5D8V6 355 aaPredicted RBP9.13□□□□□ -0.95
PKP4-217ENST00000628904 K7ELQ4 463 aaPredicted RBP9.13□□□□□ -0.95
PKP4-217ENST00000628904 EIF4A1P60842 406 aaKnown RBP9.13□□□□□ -0.95
PKP4-217ENST00000628904 RHPN1Q8TCX5 695 aa9.13□□□□□ -0.95
PKP4-217ENST00000628904 TRIM44Q96DX7 344 aaPredicted RBP9.13□□□□□ -0.95
PKP4-217ENST00000628904 TMEM94Q12767 1356 aa9.13□□□□□ -0.95
PKP4-217ENST00000628904 ZNF335Q9H4Z2 1342 aaPredicted RBP9.13□□□□□ -0.95
PKP4-217ENST00000628904 FKBP4Q02790 459 aaKnown RBP eCLIP9.13□□□□□ -0.95
PKP4-217ENST00000628904 PKP1Q13835 747 aa9.13□□□□□ -0.95
PKP4-217ENST00000628904 PNPLA6Q8IY17 1366 aa9.13□□□□□ -0.95
PKP4-217ENST00000628904 GTF2E1P29083 439 aaPredicted RBP9.13□□□□□ -0.95
PKP4-217ENST00000628904 AKAP4Q5JQC9 854 aa9.13□□□□□ -0.95
PKP4-217ENST00000628904 CAVIN1Q6NZI2 390 aaKnown RBP9.13□□□□□ -0.95
PKP4-217ENST00000628904 TOMM22Q9NS69 142 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 189 ms