RNA–Protein interactions for RNA: ENST00000628435.1

LINC00506-201, long intergenic non-protein coding RNA 506, humanhuman

TSL 4 BASIC

Gene LINC00506, Length 525 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00506-201ENST00000628435 NEFMP07197 916 aa7.73□□□□□ -1.17
LINC00506-201ENST00000628435 HSP90AB1P08238 724 aaKnown RBP7.73□□□□□ -1.17
LINC00506-201ENST00000628435 PRIM1P49642 420 aaKnown RBP7.73□□□□□ -1.17
LINC00506-201ENST00000628435 DCTN1Q14203 1278 aa7.73□□□□□ -1.17
LINC00506-201ENST00000628435 MCM10Q7L590 875 aa7.73□□□□□ -1.17
LINC00506-201ENST00000628435 IL17REQ8NFR9 667 aa7.73□□□□□ -1.17
LINC00506-201ENST00000628435 UPF1Q92900 1129 aaKnown RBP eCLIP7.73□□□□□ -1.17
LINC00506-201ENST00000628435 PNNQ9H307 717 aaKnown RBP7.73□□□□□ -1.17
LINC00506-201ENST00000628435 KAT6BQ8WYB5 2073 aa7.73□□□□□ -1.17
LINC00506-201ENST00000628435 TAF1LQ8IZX4 1826 aa7.73□□□□□ -1.17
LINC00506-201ENST00000628435 C5P01031 1676 aa7.73□□□□□ -1.17
LINC00506-201ENST00000628435 ZNF831Q5JPB2 1677 aa7.73□□□□□ -1.17
LINC00506-201ENST00000628435 COL5A3P25940 1745 aaPredicted RBP7.72□□□□□ -1.17
LINC00506-201ENST00000628435 APAF1O14727 1248 aa7.72□□□□□ -1.17
LINC00506-201ENST00000628435 PIGBQ92521 554 aa7.72□□□□□ -1.17
LINC00506-201ENST00000628435 SYTL4Q96C24 671 aaPredicted RBP7.72□□□□□ -1.17
LINC00506-201ENST00000628435 THUMPD2Q9BTF0 503 aaKnown RBP7.72□□□□□ -1.17
LINC00506-201ENST00000628435 BCL11BQ9C0K0 894 aaPredicted RBP7.72□□□□□ -1.17
LINC00506-201ENST00000628435 TRIM35Q9UPQ4 493 aa7.72□□□□□ -1.17
LINC00506-201ENST00000628435 LAMB4A4D0S4 1761 aa7.71□□□□□ -1.17
LINC00506-201ENST00000628435 TUBGCP6Q96RT7 1819 aa7.71□□□□□ -1.17
LINC00506-201ENST00000628435 ERVV-2B6SEH9 535 aa7.71□□□□□ -1.18
LINC00506-201ENST00000628435 RIPK4P57078 832 aa7.71□□□□□ -1.18
LINC00506-201ENST00000628435 NEUROD2Q15784 382 aa7.71□□□□□ -1.18
LINC00506-201ENST00000628435 SLC52A2Q9HAB3 445 aa7.71□□□□□ -1.18
LINC00506-201ENST00000628435 TMOD3Q9NYL9 352 aa7.71□□□□□ -1.18
LINC00506-201ENST00000628435 PALLDQ8WX93 1383 aa7.71□□□□□ -1.18
LINC00506-201ENST00000628435 HTATSF1O43719 755 aaKnown RBP7.7□□□□□ -1.18
LINC00506-201ENST00000628435 APBA3O96018 575 aa7.7□□□□□ -1.18
LINC00506-201ENST00000628435 DEFB132Q7Z7B7 95 aa7.7□□□□□ -1.18
LINC00506-201ENST00000628435 RTF1Q92541 710 aaKnown RBP7.7□□□□□ -1.18
LINC00506-201ENST00000628435 ASAP1Q9ULH1 1129 aa7.7□□□□□ -1.18
LINC00506-201ENST00000628435 SOCS7O14512 581 aa7.69□□□□□ -1.18
LINC00506-201ENST00000628435 CABP4P57796 275 aa7.69□□□□□ -1.18
LINC00506-201ENST00000628435 LMOD3Q0VAK6 560 aa7.69□□□□□ -1.18
LINC00506-201ENST00000628435 TEFQ10587 303 aa7.69□□□□□ -1.18
LINC00506-201ENST00000628435 NFATC2IPQ8NCF5 419 aa7.69□□□□□ -1.18
LINC00506-201ENST00000628435 ATG3Q9NT62 314 aa7.69□□□□□ -1.18
LINC00506-201ENST00000628435 C4BP0C0L5 1744 aa7.69□□□□□ -1.18
LINC00506-201ENST00000628435 MYCNP04198 464 aaPredicted RBP7.68□□□□□ -1.18
LINC00506-201ENST00000628435 BAG6P46379 1132 aa7.68□□□□□ -1.18
LINC00506-201ENST00000628435 EN1Q05925 392 aaPredicted RBP7.68□□□□□ -1.18
LINC00506-201ENST00000628435 SLC39A6Q13433 755 aa7.68□□□□□ -1.18
LINC00506-201ENST00000628435 SF3B2Q13435 895 aaKnown RBP7.68□□□□□ -1.18
LINC00506-201ENST00000628435 EZH2Q15910 746 aaKnown RBP7.68□□□□□ -1.18
LINC00506-201ENST00000628435 CCDC125Q86Z20 511 aa7.68□□□□□ -1.18
LINC00506-201ENST00000628435 CAMKK2Q96RR4 588 aa7.68□□□□□ -1.18
LINC00506-201ENST00000628435 ZNF521Q96K83 1311 aa7.68□□□□□ -1.18
LINC00506-201ENST00000628435 QSER1Q2KHR3 1735 aa7.67□□□□□ -1.18
LINC00506-201ENST00000628435 UBR3Q6ZT12 1888 aa7.67□□□□□ -1.18
LINC00506-201ENST00000628435 PLSCR1O15162 318 aa7.67□□□□□ -1.18
LINC00506-201ENST00000628435 KCNQ3O43525 872 aa7.67□□□□□ -1.18
LINC00506-201ENST00000628435 KCNQ4P56696 695 aa7.67□□□□□ -1.18
LINC00506-201ENST00000628435 CCDC27Q2M243 656 aa7.67□□□□□ -1.18
LINC00506-201ENST00000628435 WWC1Q8IX03 1113 aa7.67□□□□□ -1.18
LINC00506-201ENST00000628435 PROM2Q8N271 834 aa7.67□□□□□ -1.18
LINC00506-201ENST00000628435 SLC4A9Q96Q91 983 aa7.67□□□□□ -1.18
LINC00506-201ENST00000628435 LRRC4BQ9NT99 713 aa7.67□□□□□ -1.18
LINC00506-201ENST00000628435 SALL2Q9Y467 1007 aaPredicted RBP7.67□□□□□ -1.18
LINC00506-201ENST00000628435 C4AP0C0L4 1744 aa7.66□□□□□ -1.18
LINC00506-201ENST00000628435 BTBD11A6QL63 1104 aa7.66□□□□□ -1.18
LINC00506-201ENST00000628435 TXNRD1Q16881 649 aa7.66□□□□□ -1.18
LINC00506-201ENST00000628435 ZNF790Q6PG37 636 aa7.66□□□□□ -1.18
LINC00506-201ENST00000628435 SMARCC1Q92922 1105 aaPredicted RBP7.66□□□□□ -1.18
LINC00506-201ENST00000628435 ANO8Q9HCE9 1232 aaPredicted RBP7.66□□□□□ -1.18
LINC00506-201ENST00000628435 MIS18AQ9NYP9 233 aa7.66□□□□□ -1.18
LINC00506-201ENST00000628435 MYH14Q7Z406 1995 aaKnown RBP7.66□□□□□ -1.18
LINC00506-201ENST00000628435 LOC102724428A0A0B4J2F2 783 aa7.65□□□□□ -1.18
LINC00506-201ENST00000628435 PTCD1O75127 700 aaKnown RBP7.65□□□□□ -1.18
LINC00506-201ENST00000628435 ZNF853P0CG23 659 aa7.65□□□□□ -1.18
LINC00506-201ENST00000628435 SIK1P57059 783 aa7.65□□□□□ -1.18
LINC00506-201ENST00000628435 ITPK1Q13572 414 aa7.65□□□□□ -1.18
LINC00506-201ENST00000628435 TAF7Q15545 349 aaPredicted RBP7.65□□□□□ -1.18
LINC00506-201ENST00000628435 CASZ1Q86V15 1759 aa7.65□□□□□ -1.18
LINC00506-201ENST00000628435 ZNF496Q96IT1 587 aaPredicted RBP7.65□□□□□ -1.18
LINC00506-201ENST00000628435 RBM42Q9BTD8 480 aaKnown RBP7.65□□□□□ -1.18
LINC00506-201ENST00000628435 TSPYL4Q9UJ04 414 aa7.65□□□□□ -1.18
LINC00506-201ENST00000628435 CCNL1Q9UK58 526 aaPredicted RBP7.65□□□□□ -1.18
LINC00506-201ENST00000628435 HEG1Q9ULI3 1381 aa7.65□□□□□ -1.18
LINC00506-201ENST00000628435 IL16Q14005 1332 aa7.64□□□□□ -1.19
LINC00506-201ENST00000628435 PRAMEF22A3QJZ6 481 aa7.64□□□□□ -1.19
LINC00506-201ENST00000628435 CHL1O00533 1208 aa7.64□□□□□ -1.19
LINC00506-201ENST00000628435 HNRNPUQ00839 825 aaKnown RBP eCLIP7.64□□□□□ -1.19
LINC00506-201ENST00000628435 SLC27A3Q5K4L6 730 aa7.64□□□□□ -1.19
LINC00506-201ENST00000628435 TTC5Q8N0Z6 440 aa7.64□□□□□ -1.19
LINC00506-201ENST00000628435 NGEFQ8N5V2 710 aa7.64□□□□□ -1.19
LINC00506-201ENST00000628435 LINC00116Q8NCU8 138 aa7.64□□□□□ -1.19
LINC00506-201ENST00000628435 CFAP44Q96MT7 982 aa7.64□□□□□ -1.19
LINC00506-201ENST00000628435 SPINK5Q9NQ38 1064 aaPredicted RBP7.64□□□□□ -1.19
LINC00506-201ENST00000628435 MBIPQ9NS73 344 aa7.64□□□□□ -1.19
LINC00506-201ENST00000628435 IFT57Q9NWB7 429 aa7.64□□□□□ -1.19
LINC00506-201ENST00000628435 LAS1LQ9Y4W2 734 aaKnown RBP7.64□□□□□ -1.19
LINC00506-201ENST00000628435 SCN7AQ01118 1682 aa7.63□□□□□ -1.19
LINC00506-201ENST00000628435 FANCIQ9NVI1 1328 aa7.63□□□□□ -1.19
LINC00506-201ENST00000628435 EIF4A1P60842 406 aaKnown RBP7.63□□□□□ -1.19
LINC00506-201ENST00000628435 CALD1Q05682 793 aaKnown RBP7.63□□□□□ -1.19
LINC00506-201ENST00000628435 ZNF827Q17R98 1081 aa7.63□□□□□ -1.19
LINC00506-201ENST00000628435 KRT24Q2M2I5 525 aa7.63□□□□□ -1.19
LINC00506-201ENST00000628435 DNAJC10Q8IXB1 793 aa7.63□□□□□ -1.19
LINC00506-201ENST00000628435 TSR2Q969E8 191 aaKnown RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms