RNA–Protein interactions for RNA: ENST00000628090.1

LINC01943-202, Transcript of long intergenic non-protein coding RNA 1943, humanhuman

TSL 5 BASIC

Gene LINC01943, Length 926 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01943-202ENST00000628090 CDCA7LQ96GN5 454 aa13.14□□□□□ -0.31
LINC01943-202ENST00000628090 ZNF219Q9P2Y4 722 aaPredicted RBP13.14□□□□□ -0.31
LINC01943-202ENST00000628090 RRP7AQ9Y3A4 280 aaKnown RBP13.14□□□□□ -0.31
LINC01943-202ENST00000628090 IL16Q14005 1332 aa13.13□□□□□ -0.31
LINC01943-202ENST00000628090 SULT6B1Q6IMI4 303 aa13.13□□□□□ -0.31
LINC01943-202ENST00000628090 SPON1Q9HCB6 807 aa13.13□□□□□ -0.31
LINC01943-202ENST00000628090 ZBTB7AO95365 584 aa13.12□□□□□ -0.31
LINC01943-202ENST00000628090 CT47B1P0C2W7 299 aaPredicted RBP13.12□□□□□ -0.31
LINC01943-202ENST00000628090 DUSP27Q5VZP5 1158 aa13.12□□□□□ -0.31
LINC01943-202ENST00000628090 USHBP1Q8N6Y0 703 aa13.12□□□□□ -0.31
LINC01943-202ENST00000628090 SLC15A2Q16348 729 aa13.11□□□□□ -0.31
LINC01943-202ENST00000628090 NBPF6Q5VWK0 638 aa13.11□□□□□ -0.31
LINC01943-202ENST00000628090 NBPF4Q96M43 638 aa13.11□□□□□ -0.31
LINC01943-202ENST00000628090 RGPD3A6NKT7 1758 aaPredicted RBP13.11□□□□□ -0.31
LINC01943-202ENST00000628090 RGPD4Q7Z3J3 1758 aa13.11□□□□□ -0.31
LINC01943-202ENST00000628090 RGPD2P0DJD1 1756 aa13.1□□□□□ -0.31
LINC01943-202ENST00000628090 TRMT2AQ8IZ69 625 aaKnown RBP13.1□□□□□ -0.31
LINC01943-202ENST00000628090 GAS2L2Q8NHY3 880 aa13.1□□□□□ -0.31
LINC01943-202ENST00000628090 RTF1Q92541 710 aaKnown RBP13.1□□□□□ -0.31
LINC01943-202ENST00000628090 LRRC4BQ9NT99 713 aa13.1□□□□□ -0.31
LINC01943-202ENST00000628090 STK32BQ9NY57 414 aa13.1□□□□□ -0.31
LINC01943-202ENST00000628090 PPP1R1BQ9UD71 204 aaPredicted RBP13.1□□□□□ -0.31
LINC01943-202ENST00000628090 PTGER2P43116 358 aa13.09□□□□□ -0.31
LINC01943-202ENST00000628090 RRP1P56182 461 aaKnown RBP13.09□□□□□ -0.31
LINC01943-202ENST00000628090 KCNQ4P56696 695 aa13.09□□□□□ -0.31
LINC01943-202ENST00000628090 GNAI1P63096 354 aa13.09□□□□□ -0.31
LINC01943-202ENST00000628090 DLG5Q8TDM6 1919 aa13.08□□□□□ -0.32
LINC01943-202ENST00000628090 CASZ1Q86V15 1759 aa13.08□□□□□ -0.32
LINC01943-202ENST00000628090 CANXP27824 592 aaKnown RBP13.08□□□□□ -0.32
LINC01943-202ENST00000628090 PRIM1P49642 420 aaKnown RBP13.08□□□□□ -0.32
LINC01943-202ENST00000628090 ZCRB1Q8TBF4 217 aaKnown RBP13.08□□□□□ -0.32
LINC01943-202ENST00000628090 NHSQ6T4R5 1651 aa13.08□□□□□ -0.32
LINC01943-202ENST00000628090 RNF123Q5XPI4 1314 aa13.08□□□□□ -0.32
LINC01943-202ENST00000628090 IGSF1Q8N6C5 1336 aa13.08□□□□□ -0.32
LINC01943-202ENST00000628090 BTAF1O14981 1849 aa13.07□□□□□ -0.32
LINC01943-202ENST00000628090 ZNF827Q17R98 1081 aa13.07□□□□□ -0.32
LINC01943-202ENST00000628090 EYA1Q99502 592 aa13.07□□□□□ -0.32
LINC01943-202ENST00000628090 PPP4R2Q9NY27 417 aa13.07□□□□□ -0.32
LINC01943-202ENST00000628090 FAM208AQ9UK61 1670 aaKnown RBP13.07□□□□□ -0.32
LINC01943-202ENST00000628090 MEGF6O75095 1541 aa13.07□□□□□ -0.32
LINC01943-202ENST00000628090 HTATSF1O43719 755 aaKnown RBP13.06□□□□□ -0.32
LINC01943-202ENST00000628090 SYTL4Q96C24 671 aaPredicted RBP13.06□□□□□ -0.32
LINC01943-202ENST00000628090 TRIM35Q9UPQ4 493 aa13.06□□□□□ -0.32
LINC01943-202ENST00000628090 GOLGB1Q14789 3259 aaKnown RBP13.06□□□□□ -0.32
LINC01943-202ENST00000628090 KDRP35968 1356 aa13.06□□□□□ -0.32
LINC01943-202ENST00000628090 MS4A1P11836 297 aa13.05□□□□□ -0.32
LINC01943-202ENST00000628090 ZNF428Q96B54 188 aa13.05□□□□□ -0.32
LINC01943-202ENST00000628090 PHACTR3Q96KR7 559 aa13.05□□□□□ -0.32
LINC01943-202ENST00000628090 IFT57Q9NWB7 429 aa13.05□□□□□ -0.32
LINC01943-202ENST00000628090 LAS1LQ9Y4W2 734 aaKnown RBP13.05□□□□□ -0.32
LINC01943-202ENST00000628090 IRX6P78412 446 aaPredicted RBP13.04□□□□□ -0.32
LINC01943-202ENST00000628090 AMOTQ4VCS5 1084 aa13.04□□□□□ -0.32
LINC01943-202ENST00000628090 SGIP1Q9BQI5 828 aa13.04□□□□□ -0.32
LINC01943-202ENST00000628090 PLEKHO1Q53GL0 409 aaPredicted RBP13.03□□□□□ -0.32
LINC01943-202ENST00000628090 AEBP1Q8IUX7 1158 aa13.03□□□□□ -0.32
LINC01943-202ENST00000628090 AKT1S1Q96B36 256 aa13.03□□□□□ -0.32
LINC01943-202ENST00000628090 GNAT3A8MTJ3 354 aa13.02□□□□□ -0.33
LINC01943-202ENST00000628090 CFAP44Q96MT7 982 aa13.02□□□□□ -0.33
LINC01943-202ENST00000628090 FANCIQ9NVI1 1328 aa13.02□□□□□ -0.33
LINC01943-202ENST00000628090 PAPPAQ13219 1627 aa13.02□□□□□ -0.33
LINC01943-202ENST00000628090 SHANK3Q9BYB0 1731 aa13.02□□□□□ -0.33
LINC01943-202ENST00000628090 CYP27B1O15528 508 aa13.01□□□□□ -0.33
LINC01943-202ENST00000628090 TATP17735 454 aaPredicted RBP13.01□□□□□ -0.33
LINC01943-202ENST00000628090 RAPGEF4Q8WZA2 1011 aa13.01□□□□□ -0.33
LINC01943-202ENST00000628090 FHDC1Q9C0D6 1143 aaPredicted RBP13.01□□□□□ -0.33
LINC01943-202ENST00000628090 MTFR1LQ9H019 292 aa13.01□□□□□ -0.33
LINC01943-202ENST00000628090 PLEKHG2Q9H7P9 1386 aa13□□□□□ -0.33
LINC01943-202ENST00000628090 C1orf141Q5JVX7 400 aa13□□□□□ -0.33
LINC01943-202ENST00000628090 SLC27A3Q5K4L6 730 aa13□□□□□ -0.33
LINC01943-202ENST00000628090 CHMP4AQ9BY43 222 aa13□□□□□ -0.33
LINC01943-202ENST00000628090 IPO8O15397 1037 aaKnown RBP12.99□□□□□ -0.33
LINC01943-202ENST00000628090 EXOSC9Q06265 439 aaKnown RBP12.99□□□□□ -0.33
LINC01943-202ENST00000628090 MTHFSDQ2M296 383 aaKnown RBP12.99□□□□□ -0.33
LINC01943-202ENST00000628090 SYT17Q9BSW7 474 aa12.99□□□□□ -0.33
LINC01943-202ENST00000628090 DOT1LQ8TEK3 1739 aa12.99□□□□□ -0.33
LINC01943-202ENST00000628090 MAP3K5Q99683 1374 aa12.98□□□□□ -0.33
LINC01943-202ENST00000628090 PNPLA7Q6ZV29 1317 aa12.98□□□□□ -0.33
LINC01943-202ENST00000628090 YY1P25490 414 aa12.98□□□□□ -0.33
LINC01943-202ENST00000628090 ALDH1L2Q3SY69 923 aa12.98□□□□□ -0.33
LINC01943-202ENST00000628090 TSR2Q969E8 191 aaKnown RBP12.98□□□□□ -0.33
LINC01943-202ENST00000628090 CCDC136Q96JN2 1154 aa12.98□□□□□ -0.33
LINC01943-202ENST00000628090 BABAM1Q9NWV8 329 aa12.98□□□□□ -0.33
LINC01943-202ENST00000628090 TFCP2L1Q9NZI6 479 aa12.98□□□□□ -0.33
LINC01943-202ENST00000628090 RARSP54136 660 aaKnown RBP12.97□□□□□ -0.33
LINC01943-202ENST00000628090 AAMPQ13685 434 aa12.97□□□□□ -0.33
LINC01943-202ENST00000628090 PDE3AQ14432 1141 aa12.97□□□□□ -0.33
LINC01943-202ENST00000628090 ARXQ96QS3 562 aa12.97□□□□□ -0.33
LINC01943-202ENST00000628090 CCNL1Q9UK58 526 aaPredicted RBP12.97□□□□□ -0.33
LINC01943-202ENST00000628090 SPG7Q9UQ90 795 aa12.97□□□□□ -0.33
LINC01943-202ENST00000628090 KIF16BQ96L93 1317 aa12.96□□□□□ -0.33
LINC01943-202ENST00000628090 DSG3P32926 999 aa12.96□□□□□ -0.33
LINC01943-202ENST00000628090 AKAP4Q5JQC9 854 aa12.96□□□□□ -0.33
LINC01943-202ENST00000628090 MPRIPQ6WCQ1 1025 aa12.96□□□□□ -0.33
LINC01943-202ENST00000628090 FRAT1Q92837 279 aaPredicted RBP12.96□□□□□ -0.33
LINC01943-202ENST00000628090 CHMP4BQ9H444 224 aaKnown RBP12.96□□□□□ -0.33
LINC01943-202ENST00000628090 SMC4Q9NTJ3 1288 aa12.96□□□□□ -0.33
LINC01943-202ENST00000628090 NCAPD2Q15021 1401 aa12.96□□□□□ -0.34
LINC01943-202ENST00000628090 ZNF853P0CG23 659 aa12.95□□□□□ -0.34
LINC01943-202ENST00000628090 ZNF530Q6P9A1 599 aaPredicted RBP12.95□□□□□ -0.34
LINC01943-202ENST00000628090 FTSJ3Q8IY81 847 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms