RNA–Protein interactions for RNA: ENST00000626960.2

BCAS3-233, Transcript of BCAS3, microtubule associated cell migration factor, human

TSL 5 BASIC

Gene BCAS3, Length 227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BCAS3-233	ENST00000626960	MTFR1L	Q9H019	292 aa		12.53	□□□□□ -0.4
BCAS3-233	ENST00000626960	LGR6	Q9HBX8	967 aa		12.53	□□□□□ -0.4
BCAS3-233	ENST00000626960	C4B	P0C0L5	1744 aa		12.52	□□□□□ -0.41
BCAS3-233	ENST00000626960	RNMT	O43148	476 aa	Known RBP	12.52	□□□□□ -0.41
BCAS3-233	ENST00000626960	ITPK1	Q13572	414 aa		12.52	□□□□□ -0.41
BCAS3-233	ENST00000626960	CNGB1	Q14028	1251 aa	Predicted RBP	12.52	□□□□□ -0.41
BCAS3-233	ENST00000626960	PHACTR3	Q96KR7	559 aa		12.52	□□□□□ -0.41
BCAS3-233	ENST00000626960	SLC52A2	Q9HAB3	445 aa		12.52	□□□□□ -0.41
BCAS3-233	ENST00000626960	CEMIP	Q8WUJ3	1361 aa		12.52	□□□□□ -0.41
BCAS3-233	ENST00000626960	U2SURP	O15042	1029 aa	Known RBP	12.51	□□□□□ -0.41
BCAS3-233	ENST00000626960	CABP4	P57796	275 aa		12.51	□□□□□ -0.41
BCAS3-233	ENST00000626960	AMIGO3	Q86WK7	504 aa		12.51	□□□□□ -0.41
BCAS3-233	ENST00000626960	NFATC2IP	Q8NCF5	419 aa		12.51	□□□□□ -0.41
BCAS3-233	ENST00000626960	LINC00116	Q8NCU8	138 aa		12.51	□□□□□ -0.41
BCAS3-233	ENST00000626960	NUDC	Q9Y266	331 aa		12.51	□□□□□ -0.41
BCAS3-233	ENST00000626960	ZBTB7A	O95365	584 aa		12.5	□□□□□ -0.41
BCAS3-233	ENST00000626960	PRKAR2B	P31323	418 aa		12.5	□□□□□ -0.41
BCAS3-233	ENST00000626960	COL23A1	Q86Y22	540 aa	Predicted RBP	12.5	□□□□□ -0.41
BCAS3-233	ENST00000626960	GAS2L2	Q8NHY3	880 aa		12.5	□□□□□ -0.41
BCAS3-233	ENST00000626960	TFCP2L1	Q9NZI6	479 aa		12.5	□□□□□ -0.41
BCAS3-233	ENST00000626960	UBR3	Q6ZT12	1888 aa		12.5	□□□□□ -0.41
BCAS3-233	ENST00000626960	COL5A3	P25940	1745 aa	Predicted RBP	12.49	□□□□□ -0.41
BCAS3-233	ENST00000626960	MAP3K5	Q99683	1374 aa		12.49	□□□□□ -0.41
BCAS3-233	ENST00000626960	IL17RE	Q8NFR9	667 aa		12.49	□□□□□ -0.41
BCAS3-233	ENST00000626960	VIRMA	Q69YN4	1812 aa	Known RBP	12.48	□□□□□ -0.41
BCAS3-233	ENST00000626960	GNAT3	A8MTJ3	354 aa		12.48	□□□□□ -0.41
BCAS3-233	ENST00000626960	U2AF1L5	P0DN76	240 aa	Predicted RBP	12.48	□□□□□ -0.41
BCAS3-233	ENST00000626960	U2AF1	Q01081	240 aa	Known RBP eCLIP	12.48	□□□□□ -0.41
BCAS3-233	ENST00000626960	RC3H1	Q5TC82	1133 aa	Known RBP	12.48	□□□□□ -0.41
BCAS3-233	ENST00000626960	FLAD1	Q8NFF5	587 aa		12.48	□□□□□ -0.41
BCAS3-233	ENST00000626960	PLEKHF1	Q96S99	279 aa		12.48	□□□□□ -0.41
BCAS3-233	ENST00000626960	SIPA1L3	O60292	1781 aa	Predicted RBP	12.48	□□□□□ -0.41
BCAS3-233	ENST00000626960	KCP	Q6ZWJ8	1503 aa		12.47	□□□□□ -0.41
BCAS3-233	ENST00000626960	CNTNAP4	Q9C0A0	1308 aa		12.47	□□□□□ -0.41
BCAS3-233	ENST00000626960	ATP6V1A	P38606	617 aa		12.47	□□□□□ -0.41
BCAS3-233	ENST00000626960	ATF5	Q9Y2D1	282 aa	Predicted RBP	12.47	□□□□□ -0.41
BCAS3-233	ENST00000626960	UBR2	Q8IWV8	1755 aa		12.46	□□□□□ -0.41
BCAS3-233	ENST00000626960	TJP1	Q07157	1748 aa		12.46	□□□□□ -0.41
BCAS3-233	ENST00000626960	MYBBP1A	Q9BQG0	1328 aa	Known RBP	12.46	□□□□□ -0.41
BCAS3-233	ENST00000626960	HTATSF1	O43719	755 aa	Known RBP	12.46	□□□□□ -0.41
BCAS3-233	ENST00000626960	SSFA2	P28290	1259 aa		12.46	□□□□□ -0.41
BCAS3-233	ENST00000626960	PRKRIP1	Q9H875	184 aa	Predicted RBP	12.46	□□□□□ -0.41
BCAS3-233	ENST00000626960	MYH14	Q7Z406	1995 aa	Known RBP	12.46	□□□□□ -0.41
BCAS3-233	ENST00000626960	VSIG10	Q8N0Z9	540 aa		12.45	□□□□□ -0.42
BCAS3-233	ENST00000626960	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	12.44	□□□□□ -0.42
BCAS3-233	ENST00000626960	RPS6KA4	O75676	772 aa		12.44	□□□□□ -0.42
BCAS3-233	ENST00000626960	AK7	Q96M32	723 aa		12.44	□□□□□ -0.42
BCAS3-233	ENST00000626960	PTCD1	O75127	700 aa	Known RBP	12.43	□□□□□ -0.42
BCAS3-233	ENST00000626960	ADRA2B	P18089	450 aa		12.43	□□□□□ -0.42
BCAS3-233	ENST00000626960	SLC39A6	Q13433	755 aa		12.43	□□□□□ -0.42
BCAS3-233	ENST00000626960	ARX	Q96QS3	562 aa		12.43	□□□□□ -0.42
BCAS3-233	ENST00000626960	RBM42	Q9BTD8	480 aa	Known RBP	12.43	□□□□□ -0.42
BCAS3-233	ENST00000626960	GNPAT	O15228	680 aa		12.42	□□□□□ -0.42
BCAS3-233	ENST00000626960	INTS5	Q6P9B9	1019 aa	Known RBP	12.42	□□□□□ -0.42
BCAS3-233	ENST00000626960	ZNF790	Q6PG37	636 aa		12.42	□□□□□ -0.42
BCAS3-233	ENST00000626960	SMIM5	Q71RC9	77 aa		12.42	□□□□□ -0.42
BCAS3-233	ENST00000626960	SYT17	Q9BSW7	474 aa		12.42	□□□□□ -0.42
BCAS3-233	ENST00000626960	ZNF316	A6NFI3	1004 aa	Predicted RBP	12.41	□□□□□ -0.42
BCAS3-233	ENST00000626960	CYP19A1	P11511	503 aa	Predicted RBP	12.41	□□□□□ -0.42
BCAS3-233	ENST00000626960	CRKL	P46109	303 aa	Known RBP	12.41	□□□□□ -0.42
BCAS3-233	ENST00000626960	FHDC1	Q9C0D6	1143 aa	Predicted RBP	12.41	□□□□□ -0.42
BCAS3-233	ENST00000626960	TEF	Q10587	303 aa		12.4	□□□□□ -0.42
BCAS3-233	ENST00000626960	DNAJC10	Q8IXB1	793 aa		12.4	□□□□□ -0.42
BCAS3-233	ENST00000626960	ZNF496	Q96IT1	587 aa	Predicted RBP	12.4	□□□□□ -0.42
BCAS3-233	ENST00000626960	PPP1R1B	Q9UD71	204 aa	Predicted RBP	12.4	□□□□□ -0.42
BCAS3-233	ENST00000626960	RTCB	Q9Y3I0	505 aa	Known RBP	12.4	□□□□□ -0.42
BCAS3-233	ENST00000626960	UTRN	P46939	3433 aa		12.4	□□□□□ -0.42
BCAS3-233	ENST00000626960	DLG5	Q8TDM6	1919 aa		12.39	□□□□□ -0.43
BCAS3-233	ENST00000626960	POLD1	P28340	1107 aa		12.39	□□□□□ -0.43
BCAS3-233	ENST00000626960	NFE2L2	Q16236	605 aa		12.39	□□□□□ -0.43
BCAS3-233	ENST00000626960	ARHGEF1	Q92888	912 aa	Known RBP	12.39	□□□□□ -0.43
BCAS3-233	ENST00000626960	PNN	Q9H307	717 aa	Known RBP	12.39	□□□□□ -0.43
BCAS3-233	ENST00000626960	HEG1	Q9ULI3	1381 aa		12.39	□□□□□ -0.43
BCAS3-233	ENST00000626960	GOLGB1	Q14789	3259 aa	Known RBP	12.39	□□□□□ -0.43
BCAS3-233	ENST00000626960	C4A	P0C0L4	1744 aa		12.39	□□□□□ -0.43
BCAS3-233	ENST00000626960	TRAPPC3L	Q5T215	181 aa		12.38	□□□□□ -0.43
BCAS3-233	ENST00000626960	MCM10	Q7L590	875 aa		12.38	□□□□□ -0.43
BCAS3-233	ENST00000626960	CCDC87	Q9NVE4	849 aa		12.38	□□□□□ -0.43
BCAS3-233	ENST00000626960	SOS1	Q07889	1333 aa	Predicted RBP	12.37	□□□□□ -0.43
BCAS3-233	ENST00000626960	KCNQ3	O43525	872 aa		12.37	□□□□□ -0.43
BCAS3-233	ENST00000626960	PHF14	O94880	888 aa		12.37	□□□□□ -0.43
BCAS3-233	ENST00000626960	GYS1	P13807	737 aa		12.37	□□□□□ -0.43
BCAS3-233	ENST00000626960	DCTN1	Q14203	1278 aa		12.37	□□□□□ -0.43
BCAS3-233	ENST00000626960	BTBD11	A6QL63	1104 aa		12.36	□□□□□ -0.43
BCAS3-233	ENST00000626960	MSH5	O43196	834 aa		12.36	□□□□□ -0.43
BCAS3-233	ENST00000626960	TAF7	Q15545	349 aa	Predicted RBP	12.36	□□□□□ -0.43
BCAS3-233	ENST00000626960	MSL1	Q68DK7	614 aa		12.36	□□□□□ -0.43
BCAS3-233	ENST00000626960	TTC5	Q8N0Z6	440 aa		12.36	□□□□□ -0.43
BCAS3-233	ENST00000626960	NLGN1	Q8N2Q7	840 aa		12.36	□□□□□ -0.43
BCAS3-233	ENST00000626960	RTF1	Q92541	710 aa	Known RBP	12.36	□□□□□ -0.43
BCAS3-233	ENST00000626960	FMNL2	Q96PY5	1086 aa		12.36	□□□□□ -0.43
BCAS3-233	ENST00000626960	TEX13A	Q9BXU3	409 aa	Predicted RBP	12.36	□□□□□ -0.43
BCAS3-233	ENST00000626960	USP42	Q9H9J4	1324 aa	Known RBP	12.36	□□□□□ -0.43
BCAS3-233	ENST00000626960	TMPO	P42166	694 aa	Known RBP	12.35	□□□□□ -0.43
BCAS3-233	ENST00000626960	EIF5	P55010	431 aa	Known RBP	12.35	□□□□□ -0.43
BCAS3-233	ENST00000626960	ADAMTS8	Q9UP79	889 aa		12.35	□□□□□ -0.43
BCAS3-233	ENST00000626960	ZBTB1	Q9Y2K1	713 aa		12.35	□□□□□ -0.43
BCAS3-233	ENST00000626960	CD2AP	Q9Y5K6	639 aa		12.35	□□□□□ -0.43
BCAS3-233	ENST00000626960	KDM3B	Q7LBC6	1761 aa		12.34	□□□□□ -0.43
BCAS3-233	ENST00000626960	KIF13B	Q9NQT8	1826 aa		12.33	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms