RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 PHF14O94880 888 aa18.53■□□□□ 0.56
SOX2-OT-241ENST00000626948 COL5A3P25940 1745 aaPredicted RBP18.53■□□□□ 0.56
SOX2-OT-241ENST00000626948 ATP6V1AP38606 617 aa18.52■□□□□ 0.56
SOX2-OT-241ENST00000626948 AK7Q96M32 723 aa18.52■□□□□ 0.56
SOX2-OT-241ENST00000626948 ZNF831Q5JPB2 1677 aa18.52■□□□□ 0.56
SOX2-OT-241ENST00000626948 ERVV-2B6SEH9 535 aa18.51■□□□□ 0.55
SOX2-OT-241ENST00000626948 GPR162Q16538 588 aa18.51■□□□□ 0.55
SOX2-OT-241ENST00000626948 SULT6B1Q6IMI4 303 aa18.51■□□□□ 0.55
SOX2-OT-241ENST00000626948 ZNF530Q6P9A1 599 aaPredicted RBP18.51■□□□□ 0.55
SOX2-OT-241ENST00000626948 FLAD1Q8NFF5 587 aa18.51■□□□□ 0.55
SOX2-OT-241ENST00000626948 DCAF5Q96JK2 942 aa18.51■□□□□ 0.55
SOX2-OT-241ENST00000626948 MYH14Q7Z406 1995 aaKnown RBP18.51■□□□□ 0.55
SOX2-OT-241ENST00000626948 SSFA2P28290 1259 aa18.5■□□□□ 0.55
SOX2-OT-241ENST00000626948 PLEKHO1Q53GL0 409 aaPredicted RBP18.5■□□□□ 0.55
SOX2-OT-241ENST00000626948 MTHFSP49914 203 aa18.49■□□□□ 0.55
SOX2-OT-241ENST00000626948 SCN11AQ9UI33 1791 aa18.49■□□□□ 0.55
SOX2-OT-241ENST00000626948 GNPATO15228 680 aa18.48■□□□□ 0.55
SOX2-OT-241ENST00000626948 AMOTQ4VCS5 1084 aa18.48■□□□□ 0.55
SOX2-OT-241ENST00000626948 PELP1Q8IZL8 1130 aaKnown RBP18.47■□□□□ 0.55
SOX2-OT-241ENST00000626948 COL3A1P02461 1466 aaPredicted RBP18.46■□□□□ 0.55
SOX2-OT-241ENST00000626948 TJP1Q07157 1748 aa18.46■□□□□ 0.55
SOX2-OT-241ENST00000626948 CC2D1BQ5T0F9 858 aaKnown RBP18.46■□□□□ 0.55
SOX2-OT-241ENST00000626948 CD2APQ9Y5K6 639 aa18.46■□□□□ 0.55
SOX2-OT-241ENST00000626948 VIRMAQ69YN4 1812 aaKnown RBP18.46■□□□□ 0.55
SOX2-OT-241ENST00000626948 KIAA1551Q9HCM1 1747 aa18.46■□□□□ 0.55
SOX2-OT-241ENST00000626948 HSP90AB1P08238 724 aaKnown RBP18.45■□□□□ 0.54
SOX2-OT-241ENST00000626948 NFATC2IPQ8NCF5 419 aa18.45■□□□□ 0.54
SOX2-OT-241ENST00000626948 RBM42Q9BTD8 480 aaKnown RBP18.45■□□□□ 0.54
SOX2-OT-241ENST00000626948 LGR6Q9HBX8 967 aa18.45■□□□□ 0.54
SOX2-OT-241ENST00000626948 C4AP0C0L4 1744 aa18.45■□□□□ 0.54
SOX2-OT-241ENST00000626948 ADAMTS7Q9UKP4 1686 aa18.44■□□□□ 0.54
SOX2-OT-241ENST00000626948 HMOX1P09601 288 aa18.44■□□□□ 0.54
SOX2-OT-241ENST00000626948 CABP4P57796 275 aa18.44■□□□□ 0.54
SOX2-OT-241ENST00000626948 CICQ96RK0 1608 aaPredicted RBP18.44■□□□□ 0.54
SOX2-OT-241ENST00000626948 PTCD1O75127 700 aaKnown RBP18.42■□□□□ 0.54
SOX2-OT-241ENST00000626948 HMGB2P26583 209 aaKnown RBP18.42■□□□□ 0.54
SOX2-OT-241ENST00000626948 RC3H1Q5TC82 1133 aaKnown RBP18.42■□□□□ 0.54
SOX2-OT-241ENST00000626948 ARHGEF1Q92888 912 aaKnown RBP18.42■□□□□ 0.54
SOX2-OT-241ENST00000626948 CNTNAP4Q9C0A0 1308 aa18.42■□□□□ 0.54
SOX2-OT-241ENST00000626948 KIF13BQ9NQT8 1826 aa18.42■□□□□ 0.54
SOX2-OT-241ENST00000626948 MRC1P22897 1456 aa18.41■□□□□ 0.54
SOX2-OT-241ENST00000626948 C1orf141Q5JVX7 400 aa18.41■□□□□ 0.54
SOX2-OT-241ENST00000626948 WWC3Q9ULE0 1092 aa18.41■□□□□ 0.54
SOX2-OT-241ENST00000626948 RPS6KA4O75676 772 aa18.4■□□□□ 0.54
SOX2-OT-241ENST00000626948 MTHFSDQ2M296 383 aaKnown RBP18.4■□□□□ 0.54
SOX2-OT-241ENST00000626948 NPC1L1Q9UHC9 1359 aa18.4■□□□□ 0.54
SOX2-OT-241ENST00000626948 MMP10P09238 476 aa18.39■□□□□ 0.53
SOX2-OT-241ENST00000626948 GYS1P13807 737 aa18.39■□□□□ 0.53
SOX2-OT-241ENST00000626948 AKAP4Q5JQC9 854 aa18.39■□□□□ 0.53
SOX2-OT-241ENST00000626948 TRAPPC3LQ5T215 181 aa18.39■□□□□ 0.53
SOX2-OT-241ENST00000626948 RTCBQ9Y3I0 505 aaKnown RBP18.39■□□□□ 0.53
SOX2-OT-241ENST00000626948 N4BP2Q86UW6 1770 aaPredicted RBP18.38■□□□□ 0.53
SOX2-OT-241ENST00000626948 RNMTO43148 476 aaKnown RBP18.38■□□□□ 0.53
SOX2-OT-241ENST00000626948 CRKLP46109 303 aaKnown RBP18.38■□□□□ 0.53
SOX2-OT-241ENST00000626948 CNGB1Q14028 1251 aaPredicted RBP18.38■□□□□ 0.53
SOX2-OT-241ENST00000626948 SLC52A2Q9HAB3 445 aa18.38■□□□□ 0.53
SOX2-OT-241ENST00000626948 KCPQ6ZWJ8 1503 aa18.38■□□□□ 0.53
SOX2-OT-241ENST00000626948 DIAPH1O60610 1272 aaKnown RBP18.37■□□□□ 0.53
SOX2-OT-241ENST00000626948 SLC39A6Q13433 755 aa18.37■□□□□ 0.53
SOX2-OT-241ENST00000626948 INTS5Q6P9B9 1019 aaKnown RBP18.37■□□□□ 0.53
SOX2-OT-241ENST00000626948 PXDNLA1KZ92 1463 aa18.37■□□□□ 0.53
SOX2-OT-241ENST00000626948 GRIN3BO60391 1043 aa18.36■□□□□ 0.53
SOX2-OT-241ENST00000626948 SRP68Q9UHB9 627 aaKnown RBP18.36■□□□□ 0.53
SOX2-OT-241ENST00000626948 C10orf71Q711Q0 1435 aa18.35■□□□□ 0.53
SOX2-OT-241ENST00000626948 UBR2Q8IWV8 1755 aa18.35■□□□□ 0.53
SOX2-OT-241ENST00000626948 ADCY9O60503 1353 aa18.34■□□□□ 0.53
SOX2-OT-241ENST00000626948 ADRA2BP18089 450 aa18.34■□□□□ 0.53
SOX2-OT-241ENST00000626948 DNAJC10Q8IXB1 793 aa18.34■□□□□ 0.53
SOX2-OT-241ENST00000626948 BRCA1P38398 1863 aaKnown RBP18.33■□□□□ 0.53
SOX2-OT-241ENST00000626948 NLGN1Q8N2Q7 840 aa18.33■□□□□ 0.52
SOX2-OT-241ENST00000626948 FKBP8Q14318 412 aa18.32■□□□□ 0.52
SOX2-OT-241ENST00000626948 SIPA1L3O60292 1781 aaPredicted RBP18.32■□□□□ 0.52
SOX2-OT-241ENST00000626948 ATP10DQ9P241 1426 aa18.32■□□□□ 0.52
SOX2-OT-241ENST00000626948 USP42Q9H9J4 1324 aaKnown RBP18.31■□□□□ 0.52
SOX2-OT-241ENST00000626948 CYP19A1P11511 503 aaPredicted RBP18.31■□□□□ 0.52
SOX2-OT-241ENST00000626948 RFC4P35249 363 aa18.31■□□□□ 0.52
SOX2-OT-241ENST00000626948 C1QTNF8P60827 252 aa18.31■□□□□ 0.52
SOX2-OT-241ENST00000626948 DDR1Q08345 913 aa18.31■□□□□ 0.52
SOX2-OT-241ENST00000626948 IL17REQ8NFR9 667 aa18.31■□□□□ 0.52
SOX2-OT-241ENST00000626948 A0A0G2JLW4 131 aa18.3■□□□□ 0.52
SOX2-OT-241ENST00000626948 KCNA3P22001 575 aa18.3■□□□□ 0.52
SOX2-OT-241ENST00000626948 PHACTR3Q96KR7 559 aa18.29■□□□□ 0.52
SOX2-OT-241ENST00000626948 SOS1Q07889 1333 aaPredicted RBP18.28■□□□□ 0.52
SOX2-OT-241ENST00000626948 U2SURPO15042 1029 aaKnown RBP18.28■□□□□ 0.52
SOX2-OT-241ENST00000626948 DPEP1P16444 411 aa18.28■□□□□ 0.52
SOX2-OT-241ENST00000626948 CCDC87Q9NVE4 849 aa18.28■□□□□ 0.52
SOX2-OT-241ENST00000626948 ZBTB1Q9Y2K1 713 aa18.28■□□□□ 0.52
SOX2-OT-241ENST00000626948 CEP350Q5VT06 3117 aa18.28■□□□□ 0.52
SOX2-OT-241ENST00000626948 TM4SF1P30408 202 aa18.27■□□□□ 0.52
SOX2-OT-241ENST00000626948 TGFB2P61812 414 aa18.27■□□□□ 0.52
SOX2-OT-241ENST00000626948 BCL2L12Q9HB09 334 aa18.27■□□□□ 0.52
SOX2-OT-241ENST00000626948 RSPH6AQ9H0K4 717 aa18.26■□□□□ 0.51
SOX2-OT-241ENST00000626948 AFDNP55196 1824 aaKnown RBP18.26■□□□□ 0.51
SOX2-OT-241ENST00000626948 POLRMTO00411 1230 aaKnown RBP18.25■□□□□ 0.51
SOX2-OT-241ENST00000626948 PPP2R1AP30153 589 aa18.25■□□□□ 0.51
SOX2-OT-241ENST00000626948 USPL1Q5W0Q7 1092 aa18.25■□□□□ 0.51
SOX2-OT-241ENST00000626948 NRXN2Q9P2S2 1712 aa18.24■□□□□ 0.51
SOX2-OT-241ENST00000626948 GIGYF1O75420 1035 aaPredicted RBP18.24■□□□□ 0.51
SOX2-OT-241ENST00000626948 PARP3Q9Y6F1 533 aa18.24■□□□□ 0.51
SOX2-OT-241ENST00000626948 CEMIPQ8WUJ3 1361 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms