RNA–Protein interactions for RNA: ENST00000626259.2

AP001043.1-201, humanhuman

TSL 5 BASIC

Gene AP001043.1, Length 773 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001043.1-201ENST00000626259 CCDC102AQ96A19 550 aa8.16□□□□□ -1.1
AP001043.1-201ENST00000626259 ARPC5LQ9BPX5 153 aa8.16□□□□□ -1.1
AP001043.1-201ENST00000626259 CHMP3Q9Y3E7 222 aa8.16□□□□□ -1.1
AP001043.1-201ENST00000626259 WASHC2CQ9Y4E1 1318 aa8.15□□□□□ -1.1
AP001043.1-201ENST00000626259 GOLGA6L22H0YM25 854 aa8.15□□□□□ -1.1
AP001043.1-201ENST00000626259 PLIN1O60240 522 aa8.15□□□□□ -1.1
AP001043.1-201ENST00000626259 FOSL1P15407 271 aa8.15□□□□□ -1.1
AP001043.1-201ENST00000626259 TERF1P54274 439 aa8.15□□□□□ -1.1
AP001043.1-201ENST00000626259 COL19A1Q14993 1142 aa8.15□□□□□ -1.1
AP001043.1-201ENST00000626259 PARP9Q8IXQ6 854 aa8.15□□□□□ -1.1
AP001043.1-201ENST00000626259 PIK3R5Q8WYR1 880 aa8.15□□□□□ -1.1
AP001043.1-201ENST00000626259 GOLGA1Q92805 767 aa8.15□□□□□ -1.1
AP001043.1-201ENST00000626259 TSPYL1Q9H0U9 437 aa8.15□□□□□ -1.1
AP001043.1-201ENST00000626259 KLF15Q9UIH9 416 aa8.15□□□□□ -1.1
AP001043.1-201ENST00000626259 CEP83Q9Y592 693 aa8.15□□□□□ -1.1
AP001043.1-201ENST00000626259 IFRD1O00458 451 aaPredicted RBP8.14□□□□□ -1.11
AP001043.1-201ENST00000626259 KIF5CO60282 957 aa8.14□□□□□ -1.11
AP001043.1-201ENST00000626259 MTA2O94776 668 aa8.14□□□□□ -1.11
AP001043.1-201ENST00000626259 NAP1L1P55209 391 aaKnown RBP8.14□□□□□ -1.11
AP001043.1-201ENST00000626259 SH3D19Q5HYK7 790 aa8.14□□□□□ -1.11
AP001043.1-201ENST00000626259 SOGA3Q5TF21 947 aa8.14□□□□□ -1.11
AP001043.1-201ENST00000626259 OTUD6AQ7L8S5 288 aa8.14□□□□□ -1.11
AP001043.1-201ENST00000626259 ACRBPQ8NEB7 543 aa8.14□□□□□ -1.11
AP001043.1-201ENST00000626259 POLR3CQ9BUI4 534 aaPredicted RBP8.14□□□□□ -1.11
AP001043.1-201ENST00000626259 MUC3BQ9H195 1237 aa8.14□□□□□ -1.11
AP001043.1-201ENST00000626259 PHF8Q9UPP1 1060 aa8.14□□□□□ -1.11
AP001043.1-201ENST00000626259 VAMP4O75379 141 aa8.13□□□□□ -1.11
AP001043.1-201ENST00000626259 LDHAP00338 332 aaKnown RBP8.13□□□□□ -1.11
AP001043.1-201ENST00000626259 TPM2P07951 284 aa8.13□□□□□ -1.11
AP001043.1-201ENST00000626259 SRPK2P78362 688 aaKnown RBP8.13□□□□□ -1.11
AP001043.1-201ENST00000626259 IFT88Q13099 833 aa8.13□□□□□ -1.11
AP001043.1-201ENST00000626259 TTC39BQ5VTQ0 682 aaPredicted RBP8.13□□□□□ -1.11
AP001043.1-201ENST00000626259 DZIP3Q86Y13 1208 aaKnown RBP8.13□□□□□ -1.11
AP001043.1-201ENST00000626259 CCDC89Q8N998 374 aa8.13□□□□□ -1.11
AP001043.1-201ENST00000626259 AVENQ9NQS1 362 aaPredicted RBP8.13□□□□□ -1.11
AP001043.1-201ENST00000626259 IFT57Q9NWB7 429 aa8.13□□□□□ -1.11
AP001043.1-201ENST00000626259 NLRP2Q9NX02 1062 aa8.13□□□□□ -1.11
AP001043.1-201ENST00000626259 PRKAG2Q9UGJ0 569 aa8.13□□□□□ -1.11
AP001043.1-201ENST00000626259 TRIM6-TRIM34B2RNG4 842 aa8.12□□□□□ -1.11
AP001043.1-201ENST00000626259 G3V3G9 751 aa8.12□□□□□ -1.11
AP001043.1-201ENST00000626259 MPHOSPH10O00566 681 aaKnown RBP8.12□□□□□ -1.11
AP001043.1-201ENST00000626259 IPO7O95373 1038 aaKnown RBP8.12□□□□□ -1.11
AP001043.1-201ENST00000626259 CASP2P42575 452 aa8.12□□□□□ -1.11
AP001043.1-201ENST00000626259 C1QTNF12Q5T7M4 302 aa8.12□□□□□ -1.11
AP001043.1-201ENST00000626259 IQCEQ6IPM2 695 aa8.12□□□□□ -1.11
AP001043.1-201ENST00000626259 RPUSD2Q8IZ73 545 aaKnown RBP8.12□□□□□ -1.11
AP001043.1-201ENST00000626259 CHCHD4Q8N4Q1 142 aa8.12□□□□□ -1.11
AP001043.1-201ENST00000626259 SAMD3Q8N6K7 520 aa8.12□□□□□ -1.11
AP001043.1-201ENST00000626259 SLC43A3Q8NBI5 491 aa8.12□□□□□ -1.11
AP001043.1-201ENST00000626259 JDP2Q8WYK2 163 aa8.12□□□□□ -1.11
AP001043.1-201ENST00000626259 DHX38Q92620 1227 aaKnown RBP8.12□□□□□ -1.11
AP001043.1-201ENST00000626259 C22orf23Q9BZE7 217 aa8.12□□□□□ -1.11
AP001043.1-201ENST00000626259 LRRC27Q9C0I9 530 aa8.12□□□□□ -1.11
AP001043.1-201ENST00000626259 TMX1Q9H3N1 280 aa8.12□□□□□ -1.11
AP001043.1-201ENST00000626259 TYW1Q9NV66 732 aaKnown RBP8.12□□□□□ -1.11
AP001043.1-201ENST00000626259 LZTS1Q9Y250 596 aa8.12□□□□□ -1.11
AP001043.1-201ENST00000626259 ZNF652Q9Y2D9 606 aa8.12□□□□□ -1.11
AP001043.1-201ENST00000626259 MINK1Q8N4C8 1332 aaPredicted RBP8.11□□□□□ -1.11
AP001043.1-201ENST00000626259 TMEM88BA6NKF7 163 aa8.11□□□□□ -1.11
AP001043.1-201ENST00000626259 VGLL3A8MV65 326 aa8.11□□□□□ -1.11
AP001043.1-201ENST00000626259 KIF3CO14782 793 aa8.11□□□□□ -1.11
AP001043.1-201ENST00000626259 NPHP1O15259 732 aa8.11□□□□□ -1.11
AP001043.1-201ENST00000626259 FOSP01100 380 aaPredicted RBP8.11□□□□□ -1.11
AP001043.1-201ENST00000626259 NBPF7P0C2Y1 421 aaPredicted RBP8.11□□□□□ -1.11
AP001043.1-201ENST00000626259 CLK1P49759 484 aaKnown RBP8.11□□□□□ -1.11
AP001043.1-201ENST00000626259 TMED1Q13445 227 aa8.11□□□□□ -1.11
AP001043.1-201ENST00000626259 RAPGEF1Q13905 1077 aa8.11□□□□□ -1.11
AP001043.1-201ENST00000626259 ZNF746Q6NUN9 644 aaPredicted RBP8.11□□□□□ -1.11
AP001043.1-201ENST00000626259 MTERF4Q7Z6M4 381 aaKnown RBP8.11□□□□□ -1.11
AP001043.1-201ENST00000626259 NGEFQ8N5V2 710 aa8.11□□□□□ -1.11
AP001043.1-201ENST00000626259 FRS2Q8WU20 508 aa8.11□□□□□ -1.11
AP001043.1-201ENST00000626259 BORCS6Q96GS4 357 aa8.11□□□□□ -1.11
AP001043.1-201ENST00000626259 PIF1Q9H611 641 aa8.11□□□□□ -1.11
AP001043.1-201ENST00000626259 ZSWIM4Q9H7M6 989 aa8.11□□□□□ -1.11
AP001043.1-201ENST00000626259 UTP6Q9NYH9 597 aaKnown RBP8.11□□□□□ -1.11
AP001043.1-201ENST00000626259 CCDC163A0A0D9SF12 145 aa8.1□□□□□ -1.11
AP001043.1-201ENST00000626259 DNAJC6O75061 913 aa8.1□□□□□ -1.11
AP001043.1-201ENST00000626259 LETM1O95202 739 aaPredicted RBP8.1□□□□□ -1.11
AP001043.1-201ENST00000626259 FAM163BP0C2L3 166 aa8.1□□□□□ -1.11
AP001043.1-201ENST00000626259 CCDC159P0C7I6 412 aa8.1□□□□□ -1.11
AP001043.1-201ENST00000626259 MS4A1P11836 297 aa8.1□□□□□ -1.11
AP001043.1-201ENST00000626259 HOXB1P14653 301 aaPredicted RBP8.1□□□□□ -1.11
AP001043.1-201ENST00000626259 NAT1P18440 290 aa8.1□□□□□ -1.11
AP001043.1-201ENST00000626259 RFX1P22670 979 aa8.1□□□□□ -1.11
AP001043.1-201ENST00000626259 GTF2F1P35269 517 aaKnown RBP eCLIP8.1□□□□□ -1.11
AP001043.1-201ENST00000626259 TRPC1P48995 793 aa8.1□□□□□ -1.11
AP001043.1-201ENST00000626259 BMS1Q14692 1282 aaKnown RBP8.1□□□□□ -1.11
AP001043.1-201ENST00000626259 MAP9Q49MG5 647 aa8.1□□□□□ -1.11
AP001043.1-201ENST00000626259 NOM1Q5C9Z4 860 aaKnown RBP8.1□□□□□ -1.11
AP001043.1-201ENST00000626259 ZC3H12AQ5D1E8 599 aaKnown RBP8.1□□□□□ -1.11
AP001043.1-201ENST00000626259 PRPF38AQ8NAV1 312 aaKnown RBP8.1□□□□□ -1.11
AP001043.1-201ENST00000626259 FRMD6Q96NE9 622 aa8.1□□□□□ -1.11
AP001043.1-201ENST00000626259 TSPY26PQ9H489 355 aa8.1□□□□□ -1.11
AP001043.1-201ENST00000626259 SUN2Q9UH99 717 aa8.1□□□□□ -1.11
AP001043.1-201ENST00000626259 THRAP3Q9Y2W1 955 aaKnown RBP8.1□□□□□ -1.11
AP001043.1-201ENST00000626259 RBM19Q9Y4C8 960 aaKnown RBP8.1□□□□□ -1.11
AP001043.1-201ENST00000626259 KIF3BO15066 747 aa8.09□□□□□ -1.11
AP001043.1-201ENST00000626259 TGFB3P10600 412 aa8.09□□□□□ -1.11
AP001043.1-201ENST00000626259 RPL17P18621 184 aaKnown RBP8.09□□□□□ -1.11
AP001043.1-201ENST00000626259 WASHC5Q12768 1159 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms