RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 KCNQ2O43526 872 aa21.69■■□□□ 1.06
CCNA1-203ENST00000625767 TEFQ10587 303 aa21.69■■□□□ 1.06
CCNA1-203ENST00000625767 PRIM1P49642 420 aaKnown RBP21.69■■□□□ 1.06
CCNA1-203ENST00000625767 SYTL4Q96C24 671 aaPredicted RBP21.69■■□□□ 1.06
CCNA1-203ENST00000625767 ZNF853P0CG23 659 aa21.68■■□□□ 1.06
CCNA1-203ENST00000625767 CABP4P57796 275 aa21.68■■□□□ 1.06
CCNA1-203ENST00000625767 SLFN5Q08AF3 891 aa21.68■■□□□ 1.06
CCNA1-203ENST00000625767 ERVV-2B6SEH9 535 aa21.67■■□□□ 1.06
CCNA1-203ENST00000625767 NHSQ6T4R5 1651 aa21.67■■□□□ 1.06
CCNA1-203ENST00000625767 KCNQ3O43525 872 aa21.66■■□□□ 1.06
CCNA1-203ENST00000625767 SLC39A6Q13433 755 aa21.66■■□□□ 1.06
CCNA1-203ENST00000625767 TAF7Q15545 349 aaPredicted RBP21.66■■□□□ 1.06
CCNA1-203ENST00000625767 MBIPQ9NS73 344 aa21.66■■□□□ 1.06
CCNA1-203ENST00000625767 PAPPAQ13219 1627 aa21.66■■□□□ 1.06
CCNA1-203ENST00000625767 IL16Q14005 1332 aa21.66■■□□□ 1.06
CCNA1-203ENST00000625767 PIGBQ92521 554 aa21.66■■□□□ 1.06
CCNA1-203ENST00000625767 CFAP44Q96MT7 982 aa21.66■■□□□ 1.06
CCNA1-203ENST00000625767 IFT57Q9NWB7 429 aa21.66■■□□□ 1.06
CCNA1-203ENST00000625767 BTAF1O14981 1849 aa21.65■■□□□ 1.06
CCNA1-203ENST00000625767 FANCIQ9NVI1 1328 aa21.65■■□□□ 1.06
CCNA1-203ENST00000625767 CHL1O00533 1208 aa21.65■■□□□ 1.06
CCNA1-203ENST00000625767 BCL9O00512 1426 aa21.64■■□□□ 1.06
CCNA1-203ENST00000625767 BTBD11A6QL63 1104 aa21.64■■□□□ 1.05
CCNA1-203ENST00000625767 DUSP27Q5VZP5 1158 aa21.64■■□□□ 1.05
CCNA1-203ENST00000625767 TMOD3Q9NYL9 352 aa21.64■■□□□ 1.05
CCNA1-203ENST00000625767 TSPYL4Q9UJ04 414 aa21.64■■□□□ 1.05
CCNA1-203ENST00000625767 E9PSI1 815 aa21.63■■□□□ 1.05
CCNA1-203ENST00000625767 CALD1Q05682 793 aaKnown RBP21.63■■□□□ 1.05
CCNA1-203ENST00000625767 KRT24Q2M2I5 525 aa21.63■■□□□ 1.05
CCNA1-203ENST00000625767 TRMT2AQ8IZ69 625 aaKnown RBP21.63■■□□□ 1.05
CCNA1-203ENST00000625767 GNAI1P63096 354 aa21.63■■□□□ 1.05
CCNA1-203ENST00000625767 UBR2Q8IWV8 1755 aa21.62■■□□□ 1.05
CCNA1-203ENST00000625767 ASAP1Q9ULH1 1129 aa21.62■■□□□ 1.05
CCNA1-203ENST00000625767 FAM196AQ6ZSG2 479 aa21.6■■□□□ 1.05
CCNA1-203ENST00000625767 ZNF790Q6PG37 636 aa21.59■■□□□ 1.05
CCNA1-203ENST00000625767 MYH16Q9H6N6 1097 aa21.59■■□□□ 1.05
CCNA1-203ENST00000625767 KCPQ6ZWJ8 1503 aa21.59■■□□□ 1.05
CCNA1-203ENST00000625767 C5P01031 1676 aa21.58■■□□□ 1.05
CCNA1-203ENST00000625767 TRIM37O94972 964 aa21.58■■□□□ 1.05
CCNA1-203ENST00000625767 EXOSC9Q06265 439 aaKnown RBP21.58■■□□□ 1.05
CCNA1-203ENST00000625767 ATG3Q9NT62 314 aa21.58■■□□□ 1.05
CCNA1-203ENST00000625767 TSPYL6Q8N831 410 aa21.57■■□□□ 1.04
CCNA1-203ENST00000625767 ELL2O00472 640 aaPredicted RBP21.56■■□□□ 1.04
CCNA1-203ENST00000625767 C8orf58Q8NAV2 365 aa21.56■■□□□ 1.04
CCNA1-203ENST00000625767 EIF4A1P60842 406 aaKnown RBP21.56■■□□□ 1.04
CCNA1-203ENST00000625767 ZNF496Q96IT1 587 aaPredicted RBP21.56■■□□□ 1.04
CCNA1-203ENST00000625767 TNS1Q9HBL0 1735 aaKnown RBP21.55■■□□□ 1.04
CCNA1-203ENST00000625767 PRAMEF22A3QJZ6 481 aa21.55■■□□□ 1.04
CCNA1-203ENST00000625767 PTCD1O75127 700 aaKnown RBP21.55■■□□□ 1.04
CCNA1-203ENST00000625767 BABAM1Q9NWV8 329 aa21.54■■□□□ 1.04
CCNA1-203ENST00000625767 TTC5Q8N0Z6 440 aa21.53■■□□□ 1.04
CCNA1-203ENST00000625767 BCL11BQ9C0K0 894 aaPredicted RBP21.53■■□□□ 1.04
CCNA1-203ENST00000625767 SLC4A9Q96Q91 983 aa21.52■■□□□ 1.04
CCNA1-203ENST00000625767 HEG1Q9ULI3 1381 aa21.51■■□□□ 1.03
CCNA1-203ENST00000625767 LY75O60449 1722 aa21.51■■□□□ 1.03
CCNA1-203ENST00000625767 PALLDQ8WX93 1383 aa21.51■■□□□ 1.03
CCNA1-203ENST00000625767 RBM42Q9BTD8 480 aaKnown RBP21.5■■□□□ 1.03
CCNA1-203ENST00000625767 TJP1Q07157 1748 aa21.5■■□□□ 1.03
CCNA1-203ENST00000625767 KCNQ4P56696 695 aa21.5■■□□□ 1.03
CCNA1-203ENST00000625767 TWISTNBQ3B726 338 aaPredicted RBP21.49■■□□□ 1.03
CCNA1-203ENST00000625767 FMNL2Q96PY5 1086 aa21.49■■□□□ 1.03
CCNA1-203ENST00000625767 LAMB4A4D0S4 1761 aa21.48■■□□□ 1.03
CCNA1-203ENST00000625767 TCERG1O14776 1098 aaKnown RBP21.47■■□□□ 1.03
CCNA1-203ENST00000625767 VAMP4O75379 141 aa21.47■■□□□ 1.03
CCNA1-203ENST00000625767 GIGYF1O75420 1035 aaPredicted RBP21.47■■□□□ 1.03
CCNA1-203ENST00000625767 NECTIN2Q92692 538 aa21.47■■□□□ 1.03
CCNA1-203ENST00000625767 ILDR2Q71H61 639 aa21.46■■□□□ 1.03
CCNA1-203ENST00000625767 LOC102724428A0A0B4J2F2 783 aa21.45■■□□□ 1.02
CCNA1-203ENST00000625767 SIK1P57059 783 aa21.45■■□□□ 1.02
CCNA1-203ENST00000625767 USP16Q9Y5T5 823 aa21.45■■□□□ 1.02
CCNA1-203ENST00000625767 DNAJC10Q8IXB1 793 aa21.44■■□□□ 1.02
CCNA1-203ENST00000625767 TAF1LQ8IZX4 1826 aa21.44■■□□□ 1.02
CCNA1-203ENST00000625767 COL5A3P25940 1745 aaPredicted RBP21.44■■□□□ 1.02
CCNA1-203ENST00000625767 APBA3O96018 575 aa21.44■■□□□ 1.02
CCNA1-203ENST00000625767 EIF2S2P20042 333 aaKnown RBP21.44■■□□□ 1.02
CCNA1-203ENST00000625767 ITPK1Q13572 414 aa21.44■■□□□ 1.02
CCNA1-203ENST00000625767 SMARCC1Q92922 1105 aaPredicted RBP21.44■■□□□ 1.02
CCNA1-203ENST00000625767 BCL2L13Q9BXK5 485 aa21.44■■□□□ 1.02
CCNA1-203ENST00000625767 SNRPA1P09661 255 aaKnown RBP21.43■■□□□ 1.02
CCNA1-203ENST00000625767 MYH14Q7Z406 1995 aaKnown RBP21.43■■□□□ 1.02
CCNA1-203ENST00000625767 ATP6V1AP38606 617 aa21.42■■□□□ 1.02
CCNA1-203ENST00000625767 PIP4K2AP48426 406 aaPredicted RBP21.42■■□□□ 1.02
CCNA1-203ENST00000625767 CICQ96RK0 1608 aaPredicted RBP21.42■■□□□ 1.02
CCNA1-203ENST00000625767 ZNF831Q5JPB2 1677 aa21.42■■□□□ 1.02
CCNA1-203ENST00000625767 LRRC4BQ9NT99 713 aa21.4■■□□□ 1.02
CCNA1-203ENST00000625767 BCAR3O75815 825 aa21.4■■□□□ 1.02
CCNA1-203ENST00000625767 ANXA1P04083 346 aa21.4■■□□□ 1.02
CCNA1-203ENST00000625767 HDGFL1Q5TGJ6 251 aa21.4■■□□□ 1.02
CCNA1-203ENST00000625767 PROM2Q8N271 834 aa21.4■■□□□ 1.02
CCNA1-203ENST00000625767 SSH1Q8WYL5 1049 aa21.4■■□□□ 1.02
CCNA1-203ENST00000625767 RARSP54136 660 aaKnown RBP21.39■■□□□ 1.01
CCNA1-203ENST00000625767 VSIG10Q8N0Z9 540 aa21.39■■□□□ 1.01
CCNA1-203ENST00000625767 RCAN3Q9UKA8 241 aa21.39■■□□□ 1.01
CCNA1-203ENST00000625767 LINC00116Q8NCU8 138 aa21.38■■□□□ 1.01
CCNA1-203ENST00000625767 CCNL1Q9UK58 526 aaPredicted RBP21.38■■□□□ 1.01
CCNA1-203ENST00000625767 RGPD3A6NKT7 1758 aaPredicted RBP21.38■■□□□ 1.01
CCNA1-203ENST00000625767 RGPD4Q7Z3J3 1758 aa21.38■■□□□ 1.01
CCNA1-203ENST00000625767 A1BGP04217 495 aa21.37■■□□□ 1.01
CCNA1-203ENST00000625767 HOXB7P09629 217 aa21.37■■□□□ 1.01
CCNA1-203ENST00000625767 PROSER3Q2NL68 480 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms