RNA–Protein interactions for RNA: ENST00000625668.2

LINC02028-223, Transcript of long intergenic non-protein coding RNA 2028, human

TSL 5

Gene LINC02028, Length 646 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC02028-223	ENST00000625668	MADD	Q8WXG6	1647 aa		10.44	□□□□□ -0.74
LINC02028-223	ENST00000625668	TUSC1	Q2TAM9	212 aa		10.43	□□□□□ -0.74
LINC02028-223	ENST00000625668	ADGB	Q8N7X0	1667 aa		10.42	□□□□□ -0.74
LINC02028-223	ENST00000625668	GRM5	P41594	1212 aa		10.42	□□□□□ -0.74
LINC02028-223	ENST00000625668	NR5A1	Q13285	461 aa		10.42	□□□□□ -0.74
LINC02028-223	ENST00000625668	CSPP1	Q1MSJ5	1256 aa		10.42	□□□□□ -0.74
LINC02028-223	ENST00000625668	MYSM1	Q5VVJ2	828 aa		10.42	□□□□□ -0.74
LINC02028-223	ENST00000625668	LIMD1	Q9UGP4	676 aa		10.42	□□□□□ -0.74
LINC02028-223	ENST00000625668	DHX29	Q7Z478	1369 aa	Known RBP	10.41	□□□□□ -0.74
LINC02028-223	ENST00000625668	NR3C2	P08235	984 aa		10.41	□□□□□ -0.74
LINC02028-223	ENST00000625668	ARID5B	Q14865	1188 aa		10.41	□□□□□ -0.74
LINC02028-223	ENST00000625668	QPCT	Q16769	361 aa		10.41	□□□□□ -0.74
LINC02028-223	ENST00000625668	BPHL	Q86WA6	291 aa	Predicted RBP	10.41	□□□□□ -0.74
LINC02028-223	ENST00000625668	ZSCAN1	Q8NBB4	408 aa		10.41	□□□□□ -0.74
LINC02028-223	ENST00000625668	ITPKC	Q96DU7	683 aa		10.41	□□□□□ -0.74
LINC02028-223	ENST00000625668	ZFAND3	Q9H8U3	227 aa		10.41	□□□□□ -0.74
LINC02028-223	ENST00000625668	RRBP1	Q9P2E9	1410 aa	Known RBP	10.41	□□□□□ -0.74
LINC02028-223	ENST00000625668	FAM181B	A6NEQ2	426 aa		10.4	□□□□□ -0.74
LINC02028-223	ENST00000625668	LILRB3	O75022	631 aa		10.4	□□□□□ -0.74
LINC02028-223	ENST00000625668	ZIC2	O95409	532 aa	Predicted RBP	10.4	□□□□□ -0.74
LINC02028-223	ENST00000625668	PTPRM	P28827	1452 aa		10.4	□□□□□ -0.74
LINC02028-223	ENST00000625668	KIF15	Q9NS87	1388 aa		10.39	□□□□□ -0.75
LINC02028-223	ENST00000625668	PDE4D	Q08499	809 aa		10.39	□□□□□ -0.75
LINC02028-223	ENST00000625668	AGER	Q15109	404 aa		10.39	□□□□□ -0.75
LINC02028-223	ENST00000625668	SH3RF1	Q7Z6J0	888 aa		10.39	□□□□□ -0.75
LINC02028-223	ENST00000625668	C1QTNF2	Q9BXJ5	285 aa		10.39	□□□□□ -0.75
LINC02028-223	ENST00000625668	PTPRK	Q15262	1439 aa		10.39	□□□□□ -0.75
LINC02028-223	ENST00000625668	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	10.39	□□□□□ -0.75
LINC02028-223	ENST00000625668	DUOX2	Q9NRD8	1548 aa		10.38	□□□□□ -0.75
LINC02028-223	ENST00000625668	RIMS1	Q86UR5	1692 aa	Known RBP	10.38	□□□□□ -0.75
LINC02028-223	ENST00000625668	ADGRL2	O95490	1459 aa		10.38	□□□□□ -0.75
LINC02028-223	ENST00000625668	SOBP	A7XYQ1	873 aa		10.38	□□□□□ -0.75
LINC02028-223	ENST00000625668	VSIG8	P0DPA2	414 aa		10.38	□□□□□ -0.75
LINC02028-223	ENST00000625668	CHIC2	Q9UKJ5	165 aa		10.38	□□□□□ -0.75
LINC02028-223	ENST00000625668	ARMC2	Q8NEN0	867 aa		10.37	□□□□□ -0.75
LINC02028-223	ENST00000625668	RRP7BP	Q9NSQ0	103 aa		10.37	□□□□□ -0.75
LINC02028-223	ENST00000625668	ANKRD30A	Q9BXX3	1397 aa		10.37	□□□□□ -0.75
LINC02028-223	ENST00000625668	FER1L4	A9Z1Z3	1794 aa		10.37	□□□□□ -0.75
LINC02028-223	ENST00000625668	NCOA1	Q15788	1441 aa		10.36	□□□□□ -0.75
LINC02028-223	ENST00000625668	ERBIN	Q96RT1	1412 aa		10.36	□□□□□ -0.75
LINC02028-223	ENST00000625668	NUTM2B	A6NNL0	878 aa	Predicted RBP	10.36	□□□□□ -0.75
LINC02028-223	ENST00000625668	NUTM2E	B1AL46	878 aa	Predicted RBP	10.36	□□□□□ -0.75
LINC02028-223	ENST00000625668	NUTM2D	Q5VT03	806 aa	Predicted RBP	10.36	□□□□□ -0.75
LINC02028-223	ENST00000625668	NUTM2A	Q8IVF1	878 aa	Predicted RBP	10.36	□□□□□ -0.75
LINC02028-223	ENST00000625668	EIF2AK4	Q9P2K8	1649 aa	Known RBP	10.36	□□□□□ -0.75
LINC02028-223	ENST00000625668	KIF3B	O15066	747 aa		10.35	□□□□□ -0.75
LINC02028-223	ENST00000625668	ITGAE	P38570	1179 aa		10.35	□□□□□ -0.75
LINC02028-223	ENST00000625668	GGT6	Q6P531	493 aa		10.35	□□□□□ -0.75
LINC02028-223	ENST00000625668	TSC1	Q92574	1164 aa		10.35	□□□□□ -0.75
LINC02028-223	ENST00000625668	MAP4K5	Q9Y4K4	846 aa		10.35	□□□□□ -0.75
LINC02028-223	ENST00000625668	CNTLN	Q9NXG0	1405 aa		10.34	□□□□□ -0.75
LINC02028-223	ENST00000625668	RNF17	Q9BXT8	1623 aa	Known RBP	10.34	□□□□□ -0.75
LINC02028-223	ENST00000625668	RTL5	Q5HYW3	569 aa	Predicted RBP	10.34	□□□□□ -0.75
LINC02028-223	ENST00000625668	SH3BP5L	Q7L8J4	393 aa		10.34	□□□□□ -0.75
LINC02028-223	ENST00000625668	TRMT44	Q8IYL2	757 aa	Known RBP	10.34	□□□□□ -0.75
LINC02028-223	ENST00000625668	MEIOB	Q8N635	442 aa		10.34	□□□□□ -0.75
LINC02028-223	ENST00000625668	ESF1	Q9H501	851 aa	Known RBP	10.34	□□□□□ -0.75
LINC02028-223	ENST00000625668	KDM5D	Q9BY66	1539 aa		10.33	□□□□□ -0.76
LINC02028-223	ENST00000625668	MROH1	Q8NDA8	1641 aa		10.33	□□□□□ -0.76
LINC02028-223	ENST00000625668	C6orf118	Q5T5N4	469 aa		10.33	□□□□□ -0.76
LINC02028-223	ENST00000625668	NBPF14	Q5TI25	921 aa		10.33	□□□□□ -0.76
LINC02028-223	ENST00000625668	HELB	Q8NG08	1087 aa	Predicted RBP	10.33	□□□□□ -0.76
LINC02028-223	ENST00000625668	ROCK1	Q13464	1354 aa		10.33	□□□□□ -0.76
LINC02028-223	ENST00000625668	FAM135A	Q9P2D6	1515 aa		10.33	□□□□□ -0.76
LINC02028-223	ENST00000625668	MAN1A2	O60476	641 aa		10.32	□□□□□ -0.76
LINC02028-223	ENST00000625668	CEBPA	P49715	358 aa	Predicted RBP	10.32	□□□□□ -0.76
LINC02028-223	ENST00000625668	LINC00528	Q8N1L1	170 aa		10.32	□□□□□ -0.76
LINC02028-223	ENST00000625668	PRDM15	P57071	1507 aa	Predicted RBP	10.32	□□□□□ -0.76
LINC02028-223	ENST00000625668	CLTC	Q00610	1675 aa	Known RBP	10.31	□□□□□ -0.76
LINC02028-223	ENST00000625668	FSHR	P23945	695 aa		10.31	□□□□□ -0.76
LINC02028-223	ENST00000625668	CLK2	P49760	499 aa	Known RBP	10.31	□□□□□ -0.76
LINC02028-223	ENST00000625668	ANKRD50	Q9ULJ7	1429 aa		10.31	□□□□□ -0.76
LINC02028-223	ENST00000625668	ABCC3	O15438	1527 aa		10.3	□□□□□ -0.76
LINC02028-223	ENST00000625668	UPP2	O95045	317 aa		10.3	□□□□□ -0.76
LINC02028-223	ENST00000625668	BMP2	P12643	396 aa		10.3	□□□□□ -0.76
LINC02028-223	ENST00000625668	MROH2A	A6NES4	1674 aa		10.3	□□□□□ -0.76
LINC02028-223	ENST00000625668	SOS2	Q07890	1332 aa	Predicted RBP	10.3	□□□□□ -0.76
LINC02028-223	ENST00000625668	DEPDC5	O75140	1603 aa		10.29	□□□□□ -0.76
LINC02028-223	ENST00000625668	ZMYM3	Q14202	1370 aa		10.29	□□□□□ -0.76
LINC02028-223	ENST00000625668	C3	P01024	1663 aa		10.29	□□□□□ -0.76
LINC02028-223	ENST00000625668	VASH1	Q7L8A9	365 aa	Predicted RBP	10.29	□□□□□ -0.76
LINC02028-223	ENST00000625668	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	10.29	□□□□□ -0.76
LINC02028-223	ENST00000625668	SLC24A3	Q9HC58	644 aa		10.29	□□□□□ -0.76
LINC02028-223	ENST00000625668	WASHC2C	Q9Y4E1	1318 aa		10.29	□□□□□ -0.76
LINC02028-223	ENST00000625668	PPFIA3	O75145	1194 aa		10.28	□□□□□ -0.76
LINC02028-223	ENST00000625668	EMILIN1	Q9Y6C2	1016 aa		10.28	□□□□□ -0.76
LINC02028-223	ENST00000625668	ZC3H13	Q5T200	1668 aa	Known RBP	10.28	□□□□□ -0.76
LINC02028-223	ENST00000625668	NPAT	Q14207	1427 aa		10.27	□□□□□ -0.77
LINC02028-223	ENST00000625668	MAGEB6P1	A0A0J9YX57	407 aa		10.27	□□□□□ -0.77
LINC02028-223	ENST00000625668	RSPH6A	Q9H0K4	717 aa		10.27	□□□□□ -0.77
LINC02028-223	ENST00000625668	DNMT3L	Q9UJW3	386 aa		10.27	□□□□□ -0.77
LINC02028-223	ENST00000625668	PZP	P20742	1482 aa		10.27	□□□□□ -0.77
LINC02028-223	ENST00000625668	VWDE	Q8N2E2	1590 aa		10.26	□□□□□ -0.77
LINC02028-223	ENST00000625668	ERFE	Q4G0M1	354 aa		10.26	□□□□□ -0.77
LINC02028-223	ENST00000625668	CCDC116	Q8IYX3	515 aa		10.26	□□□□□ -0.77
LINC02028-223	ENST00000625668	TSEN34	Q9BSV6	310 aa	Known RBP	10.26	□□□□□ -0.77
LINC02028-223	ENST00000625668	UNC13B	O14795	1591 aa		10.26	□□□□□ -0.77
LINC02028-223	ENST00000625668	KANK1	Q14678	1352 aa		10.26	□□□□□ -0.77
LINC02028-223	ENST00000625668	HFM1	A2PYH4	1435 aa		10.25	□□□□□ -0.77
LINC02028-223	ENST00000625668	NAIP	Q13075	1403 aa		10.25	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms