RNA–Protein interactions for RNA: ENST00000624403.1

ATRX-216, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-216ENST00000624403 DLG5Q8TDM6 1919 aa13.37□□□□□ -0.27
ATRX-216ENST00000624403 CRYBG1Q9Y4K1 1723 aa13.36□□□□□ -0.27
ATRX-216ENST00000624403 CT47B1P0C2W7 299 aaPredicted RBP13.36□□□□□ -0.27
ATRX-216ENST00000624403 GNAI1P63096 354 aa13.36□□□□□ -0.27
ATRX-216ENST00000624403 C20orf194Q5TEA3 1177 aa13.36□□□□□ -0.27
ATRX-216ENST00000624403 GAS2L2Q8NHY3 880 aa13.36□□□□□ -0.27
ATRX-216ENST00000624403 CRBNQ96SW2 442 aa13.35□□□□□ -0.27
ATRX-216ENST00000624403 NCAPD2Q15021 1401 aa13.35□□□□□ -0.27
ATRX-216ENST00000624403 NHSL1Q5SYE7 1610 aa13.35□□□□□ -0.27
ATRX-216ENST00000624403 B4GALNT3Q6L9W6 998 aa13.34□□□□□ -0.27
ATRX-216ENST00000624403 MCM10Q7L590 875 aa13.34□□□□□ -0.27
ATRX-216ENST00000624403 CFAP44Q96MT7 982 aa13.34□□□□□ -0.27
ATRX-216ENST00000624403 CPDO75976 1380 aa13.33□□□□□ -0.27
ATRX-216ENST00000624403 COL18A1P39060 1754 aa13.33□□□□□ -0.28
ATRX-216ENST00000624403 EFCAB3Q8N7B9 438 aa13.33□□□□□ -0.28
ATRX-216ENST00000624403 MBIPQ9NS73 344 aa13.33□□□□□ -0.28
ATRX-216ENST00000624403 ABCC6O95255 1503 aa13.33□□□□□ -0.28
ATRX-216ENST00000624403 KIAA0232Q92628 1395 aa13.32□□□□□ -0.28
ATRX-216ENST00000624403 CRB1P82279 1406 aa13.32□□□□□ -0.28
ATRX-216ENST00000624403 CAMTA1Q9Y6Y1 1673 aa13.32□□□□□ -0.28
ATRX-216ENST00000624403 HTATSF1O43719 755 aaKnown RBP13.32□□□□□ -0.28
ATRX-216ENST00000624403 CHRNA2Q15822 529 aa13.32□□□□□ -0.28
ATRX-216ENST00000624403 ILDR1Q86SU0 546 aaPredicted RBP13.32□□□□□ -0.28
ATRX-216ENST00000624403 RTF1Q92541 710 aaKnown RBP13.32□□□□□ -0.28
ATRX-216ENST00000624403 ERBB3P21860 1342 aa13.32□□□□□ -0.28
ATRX-216ENST00000624403 RGPD2P0DJD1 1756 aa13.32□□□□□ -0.28
ATRX-216ENST00000624403 GNAT3A8MTJ3 354 aa13.31□□□□□ -0.28
ATRX-216ENST00000624403 DPY19L2Q6NUT2 758 aa13.31□□□□□ -0.28
ATRX-216ENST00000624403 BCL2L13Q9BXK5 485 aa13.31□□□□□ -0.28
ATRX-216ENST00000624403 MAP3K5Q99683 1374 aa13.31□□□□□ -0.28
ATRX-216ENST00000624403 LMO7Q8WWI1 1683 aa13.31□□□□□ -0.28
ATRX-216ENST00000624403 RGPD5Q99666 1765 aa13.3□□□□□ -0.28
ATRX-216ENST00000624403 CHL1O00533 1208 aa13.3□□□□□ -0.28
ATRX-216ENST00000624403 RGL2O15211 777 aa13.3□□□□□ -0.28
ATRX-216ENST00000624403 CANXP27824 592 aaKnown RBP13.3□□□□□ -0.28
ATRX-216ENST00000624403 SSH1Q8WYL5 1049 aa13.3□□□□□ -0.28
ATRX-216ENST00000624403 FRAT1Q92837 279 aaPredicted RBP13.3□□□□□ -0.28
ATRX-216ENST00000624403 ROBO1Q9Y6N7 1651 aa13.29□□□□□ -0.28
ATRX-216ENST00000624403 PDE3AQ14432 1141 aa13.29□□□□□ -0.28
ATRX-216ENST00000624403 CCDC136Q96JN2 1154 aa13.29□□□□□ -0.28
ATRX-216ENST00000624403 SMC4Q9NTJ3 1288 aa13.29□□□□□ -0.28
ATRX-216ENST00000624403 AHDC1Q5TGY3 1603 aaPredicted RBP13.28□□□□□ -0.28
ATRX-216ENST00000624403 ABCA3Q99758 1704 aa13.28□□□□□ -0.28
ATRX-216ENST00000624403 VAMP4O75379 141 aa13.28□□□□□ -0.28
ATRX-216ENST00000624403 CSB-PGBD3P0DP91 1061 aa13.28□□□□□ -0.28
ATRX-216ENST00000624403 HAP1P54257 671 aaPredicted RBP13.28□□□□□ -0.28
ATRX-216ENST00000624403 PLEKHO1Q53GL0 409 aaPredicted RBP13.28□□□□□ -0.28
ATRX-216ENST00000624403 TSPYL6Q8N831 410 aa13.28□□□□□ -0.28
ATRX-216ENST00000624403 C8orf58Q8NAV2 365 aa13.28□□□□□ -0.28
ATRX-216ENST00000624403 NLRP2Q9NX02 1062 aa13.28□□□□□ -0.28
ATRX-216ENST00000624403 LRRC37A3O60309 1634 aa13.28□□□□□ -0.28
ATRX-216ENST00000624403 ALDH1L2Q3SY69 923 aa13.27□□□□□ -0.29
ATRX-216ENST00000624403 AMOTQ4VCS5 1084 aa13.27□□□□□ -0.29
ATRX-216ENST00000624403 SLAIN1Q8ND83 568 aa13.27□□□□□ -0.29
ATRX-216ENST00000624403 IL17REQ8NFR9 667 aa13.27□□□□□ -0.29
ATRX-216ENST00000624403 ZNF428Q96B54 188 aa13.27□□□□□ -0.29
ATRX-216ENST00000624403 PRDM11Q9NQV5 511 aa13.27□□□□□ -0.29
ATRX-216ENST00000624403 TNNQ9UQP3 1299 aa13.27□□□□□ -0.29
ATRX-216ENST00000624403 ELL2O00472 640 aaPredicted RBP13.26□□□□□ -0.29
ATRX-216ENST00000624403 TWISTNBQ3B726 338 aaPredicted RBP13.26□□□□□ -0.29
ATRX-216ENST00000624403 ZNF530Q6P9A1 599 aaPredicted RBP13.26□□□□□ -0.29
ATRX-216ENST00000624403 PANK1Q8TE04 598 aa13.26□□□□□ -0.29
ATRX-216ENST00000624403 FAM208AQ9UK61 1670 aaKnown RBP13.25□□□□□ -0.29
ATRX-216ENST00000624403 AKAP4Q5JQC9 854 aa13.25□□□□□ -0.29
ATRX-216ENST00000624403 ZKSCAN2Q63HK3 967 aa13.25□□□□□ -0.29
ATRX-216ENST00000624403 MIS18AQ9NYP9 233 aa13.25□□□□□ -0.29
ATRX-216ENST00000624403 TSPYL4Q9UJ04 414 aa13.25□□□□□ -0.29
ATRX-216ENST00000624403 RLBP1P12271 317 aa13.24□□□□□ -0.29
ATRX-216ENST00000624403 KRT24Q2M2I5 525 aa13.24□□□□□ -0.29
ATRX-216ENST00000624403 MRPL50Q8N5N7 158 aaKnown RBP13.24□□□□□ -0.29
ATRX-216ENST00000624403 RAPGEF4Q8WZA2 1011 aa13.24□□□□□ -0.29
ATRX-216ENST00000624403 BCL11BQ9C0K0 894 aaPredicted RBP13.24□□□□□ -0.29
ATRX-216ENST00000624403 NOB1Q9ULX3 412 aaKnown RBP13.24□□□□□ -0.29
ATRX-216ENST00000624403 CEMIPQ8WUJ3 1361 aa13.23□□□□□ -0.29
ATRX-216ENST00000624403 TATP17735 454 aaPredicted RBP13.23□□□□□ -0.29
ATRX-216ENST00000624403 BRPF1P55201 1214 aaPredicted RBP13.23□□□□□ -0.29
ATRX-216ENST00000624403 C1orf141Q5JVX7 400 aa13.23□□□□□ -0.29
ATRX-216ENST00000624403 L3MBTL3Q96JM7 780 aaPredicted RBP13.23□□□□□ -0.29
ATRX-216ENST00000624403 LGR6Q9HBX8 967 aa13.23□□□□□ -0.29
ATRX-216ENST00000624403 COG6Q9Y2V7 657 aa13.23□□□□□ -0.29
ATRX-216ENST00000624403 MEGF6O75095 1541 aa13.23□□□□□ -0.29
ATRX-216ENST00000624403 COL5A2P05997 1499 aaPredicted RBP13.23□□□□□ -0.29
ATRX-216ENST00000624403 WDR17Q8IZU2 1322 aa13.22□□□□□ -0.29
ATRX-216ENST00000624403 KIF16BQ96L93 1317 aa13.22□□□□□ -0.29
ATRX-216ENST00000624403 TCERG1O14776 1098 aaKnown RBP13.22□□□□□ -0.29
ATRX-216ENST00000624403 TAF7Q15545 349 aaPredicted RBP13.22□□□□□ -0.29
ATRX-216ENST00000624403 CLUAP1Q96AJ1 413 aa13.22□□□□□ -0.29
ATRX-216ENST00000624403 BABAM1Q9NWV8 329 aa13.22□□□□□ -0.29
ATRX-216ENST00000624403 TAOK2Q9UL54 1235 aa13.22□□□□□ -0.29
ATRX-216ENST00000624403 COL22A1Q8NFW1 1626 aaPredicted RBP13.21□□□□□ -0.29
ATRX-216ENST00000624403 IPO8O15397 1037 aaKnown RBP13.21□□□□□ -0.29
ATRX-216ENST00000624403 RNMTO43148 476 aaKnown RBP13.21□□□□□ -0.29
ATRX-216ENST00000624403 TOM1O60784 492 aa13.21□□□□□ -0.29
ATRX-216ENST00000624403 MS4A1P11836 297 aa13.21□□□□□ -0.29
ATRX-216ENST00000624403 TRIM27P14373 513 aa13.21□□□□□ -0.29
ATRX-216ENST00000624403 ATF7IPQ6VMQ6 1270 aa13.21□□□□□ -0.29
ATRX-216ENST00000624403 MPRIPQ6WCQ1 1025 aa13.21□□□□□ -0.29
ATRX-216ENST00000624403 DZIP1LQ8IYY4 767 aaKnown RBP13.21□□□□□ -0.29
ATRX-216ENST00000624403 FAM163AQ96GL9 167 aaPredicted RBP13.21□□□□□ -0.29
ATRX-216ENST00000624403 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms