RNA–Protein interactions for RNA: ENST00000624242.1

AC116553.3-201, humanhuman

BASIC

Gene AC116553.3, Length 1,800 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC116553.3-201ENST00000624242 WDR63Q8IWG1 891 aa13.27□□□□□ -0.28
AC116553.3-201ENST00000624242 NGEFQ8N5V2 710 aa13.27□□□□□ -0.28
AC116553.3-201ENST00000624242 SYTL4Q96C24 671 aaPredicted RBP13.27□□□□□ -0.28
AC116553.3-201ENST00000624242 KAT6BQ8WYB5 2073 aa13.27□□□□□ -0.28
AC116553.3-201ENST00000624242 PRIM1P49642 420 aaKnown RBP13.27□□□□□ -0.29
AC116553.3-201ENST00000624242 SLFN5Q08AF3 891 aa13.27□□□□□ -0.29
AC116553.3-201ENST00000624242 TEFQ10587 303 aa13.27□□□□□ -0.29
AC116553.3-201ENST00000624242 SLC39A6Q13433 755 aa13.27□□□□□ -0.29
AC116553.3-201ENST00000624242 SLC52A2Q9HAB3 445 aa13.27□□□□□ -0.29
AC116553.3-201ENST00000624242 MBIPQ9NS73 344 aa13.27□□□□□ -0.29
AC116553.3-201ENST00000624242 EP400Q96L91 3159 aa13.26□□□□□ -0.29
AC116553.3-201ENST00000624242 MRC1P22897 1456 aa13.26□□□□□ -0.29
AC116553.3-201ENST00000624242 ZNF853P0CG23 659 aa13.26□□□□□ -0.29
AC116553.3-201ENST00000624242 CABP4P57796 275 aa13.26□□□□□ -0.29
AC116553.3-201ENST00000624242 KRT24Q2M2I5 525 aa13.26□□□□□ -0.29
AC116553.3-201ENST00000624242 FANCIQ9NVI1 1328 aa13.26□□□□□ -0.29
AC116553.3-201ENST00000624242 SIPA1L3O60292 1781 aaPredicted RBP13.25□□□□□ -0.29
AC116553.3-201ENST00000624242 ITGB4P16144 1822 aa13.25□□□□□ -0.29
AC116553.3-201ENST00000624242 TAF7Q15545 349 aaPredicted RBP13.25□□□□□ -0.29
AC116553.3-201ENST00000624242 DUSP27Q5VZP5 1158 aa13.25□□□□□ -0.29
AC116553.3-201ENST00000624242 PIGBQ92521 554 aa13.25□□□□□ -0.29
AC116553.3-201ENST00000624242 CFAP44Q96MT7 982 aa13.25□□□□□ -0.29
AC116553.3-201ENST00000624242 IFT57Q9NWB7 429 aa13.25□□□□□ -0.29
AC116553.3-201ENST00000624242 TSPYL4Q9UJ04 414 aa13.25□□□□□ -0.29
AC116553.3-201ENST00000624242 BTBD11A6QL63 1104 aa13.24□□□□□ -0.29
AC116553.3-201ENST00000624242 CHL1O00533 1208 aa13.24□□□□□ -0.29
AC116553.3-201ENST00000624242 IL16Q14005 1332 aa13.24□□□□□ -0.29
AC116553.3-201ENST00000624242 ERVV-2B6SEH9 535 aa13.23□□□□□ -0.29
AC116553.3-201ENST00000624242 E9PSI1 815 aa13.23□□□□□ -0.29
AC116553.3-201ENST00000624242 TMOD3Q9NYL9 352 aa13.23□□□□□ -0.29
AC116553.3-201ENST00000624242 GNAI1P63096 354 aa13.23□□□□□ -0.29
AC116553.3-201ENST00000624242 CALD1Q05682 793 aaKnown RBP13.23□□□□□ -0.29
AC116553.3-201ENST00000624242 TRMT2AQ8IZ69 625 aaKnown RBP13.23□□□□□ -0.29
AC116553.3-201ENST00000624242 ASAP1Q9ULH1 1129 aa13.23□□□□□ -0.29
AC116553.3-201ENST00000624242 BCL9O00512 1426 aa13.22□□□□□ -0.29
AC116553.3-201ENST00000624242 ELL2O00472 640 aaPredicted RBP13.22□□□□□ -0.29
AC116553.3-201ENST00000624242 TSPYL6Q8N831 410 aa13.22□□□□□ -0.29
AC116553.3-201ENST00000624242 KDM3BQ7LBC6 1761 aa13.21□□□□□ -0.29
AC116553.3-201ENST00000624242 EXOSC9Q06265 439 aaKnown RBP13.21□□□□□ -0.29
AC116553.3-201ENST00000624242 MYH16Q9H6N6 1097 aa13.21□□□□□ -0.29
AC116553.3-201ENST00000624242 PRAMEF22A3QJZ6 481 aa13.2□□□□□ -0.3
AC116553.3-201ENST00000624242 TRIM37O94972 964 aa13.2□□□□□ -0.3
AC116553.3-201ENST00000624242 C8orf58Q8NAV2 365 aa13.2□□□□□ -0.3
AC116553.3-201ENST00000624242 ATG3Q9NT62 314 aa13.2□□□□□ -0.3
AC116553.3-201ENST00000624242 SBF2Q86WG5 1849 aa13.2□□□□□ -0.3
AC116553.3-201ENST00000624242 ZNF790Q6PG37 636 aa13.2□□□□□ -0.3
AC116553.3-201ENST00000624242 NHSQ6T4R5 1651 aa13.19□□□□□ -0.3
AC116553.3-201ENST00000624242 PTCD1O75127 700 aaKnown RBP13.19□□□□□ -0.3
AC116553.3-201ENST00000624242 FAM196AQ6ZSG2 479 aa13.19□□□□□ -0.3
AC116553.3-201ENST00000624242 ZNF496Q96IT1 587 aaPredicted RBP13.19□□□□□ -0.3
AC116553.3-201ENST00000624242 PAPPAQ13219 1627 aa13.19□□□□□ -0.3
AC116553.3-201ENST00000624242 EIF4A1P60842 406 aaKnown RBP13.18□□□□□ -0.3
AC116553.3-201ENST00000624242 BTAF1O14981 1849 aa13.18□□□□□ -0.3
AC116553.3-201ENST00000624242 KCPQ6ZWJ8 1503 aa13.18□□□□□ -0.3
AC116553.3-201ENST00000624242 TCERG1O14776 1098 aaKnown RBP13.18□□□□□ -0.3
AC116553.3-201ENST00000624242 KCNQ4P56696 695 aa13.18□□□□□ -0.3
AC116553.3-201ENST00000624242 TTC5Q8N0Z6 440 aa13.17□□□□□ -0.3
AC116553.3-201ENST00000624242 NECTIN2Q92692 538 aa13.17□□□□□ -0.3
AC116553.3-201ENST00000624242 SLC4A9Q96Q91 983 aa13.17□□□□□ -0.3
AC116553.3-201ENST00000624242 RBM42Q9BTD8 480 aaKnown RBP13.16□□□□□ -0.3
AC116553.3-201ENST00000624242 BABAM1Q9NWV8 329 aa13.16□□□□□ -0.3
AC116553.3-201ENST00000624242 UBR2Q8IWV8 1755 aa13.15□□□□□ -0.3
AC116553.3-201ENST00000624242 C5P01031 1676 aa13.15□□□□□ -0.3
AC116553.3-201ENST00000624242 PALLDQ8WX93 1383 aa13.15□□□□□ -0.3
AC116553.3-201ENST00000624242 TWISTNBQ3B726 338 aaPredicted RBP13.15□□□□□ -0.3
AC116553.3-201ENST00000624242 BCL2L13Q9BXK5 485 aa13.15□□□□□ -0.3
AC116553.3-201ENST00000624242 BCL11BQ9C0K0 894 aaPredicted RBP13.15□□□□□ -0.3
AC116553.3-201ENST00000624242 VAMP4O75379 141 aa13.14□□□□□ -0.31
AC116553.3-201ENST00000624242 HEG1Q9ULI3 1381 aa13.14□□□□□ -0.31
AC116553.3-201ENST00000624242 GIGYF1O75420 1035 aaPredicted RBP13.13□□□□□ -0.31
AC116553.3-201ENST00000624242 PIP4K2AP48426 406 aaPredicted RBP13.13□□□□□ -0.31
AC116553.3-201ENST00000624242 FMNL2Q96PY5 1086 aa13.13□□□□□ -0.31
AC116553.3-201ENST00000624242 EIF2S2P20042 333 aaKnown RBP13.13□□□□□ -0.31
AC116553.3-201ENST00000624242 ILDR2Q71H61 639 aa13.13□□□□□ -0.31
AC116553.3-201ENST00000624242 DNAJC10Q8IXB1 793 aa13.13□□□□□ -0.31
AC116553.3-201ENST00000624242 USP16Q9Y5T5 823 aa13.13□□□□□ -0.31
AC116553.3-201ENST00000624242 TNS1Q9HBL0 1735 aaKnown RBP13.12□□□□□ -0.31
AC116553.3-201ENST00000624242 LOC102724428A0A0B4J2F2 783 aa13.11□□□□□ -0.31
AC116553.3-201ENST00000624242 ANXA1P04083 346 aa13.11□□□□□ -0.31
AC116553.3-201ENST00000624242 SIK1P57059 783 aa13.11□□□□□ -0.31
AC116553.3-201ENST00000624242 ITPK1Q13572 414 aa13.11□□□□□ -0.31
AC116553.3-201ENST00000624242 BCAR3O75815 825 aa13.11□□□□□ -0.31
AC116553.3-201ENST00000624242 APBA3O96018 575 aa13.11□□□□□ -0.31
AC116553.3-201ENST00000624242 C1QBPQ07021 282 aaKnown RBP13.11□□□□□ -0.31
AC116553.3-201ENST00000624242 TJP1Q07157 1748 aa13.1□□□□□ -0.31
AC116553.3-201ENST00000624242 CENPBP07199 599 aaPredicted RBP13.1□□□□□ -0.31
AC116553.3-201ENST00000624242 SNRPA1P09661 255 aaKnown RBP13.1□□□□□ -0.31
AC116553.3-201ENST00000624242 ATP6V1AP38606 617 aa13.1□□□□□ -0.31
AC116553.3-201ENST00000624242 RARSP54136 660 aaKnown RBP13.1□□□□□ -0.31
AC116553.3-201ENST00000624242 PROSER3Q2NL68 480 aa13.1□□□□□ -0.31
AC116553.3-201ENST00000624242 HDGFL1Q5TGJ6 251 aa13.1□□□□□ -0.31
AC116553.3-201ENST00000624242 SSH1Q8WYL5 1049 aa13.1□□□□□ -0.31
AC116553.3-201ENST00000624242 RCAN3Q9UKA8 241 aa13.1□□□□□ -0.31
AC116553.3-201ENST00000624242 SMARCC1Q92922 1105 aaPredicted RBP13.09□□□□□ -0.31
AC116553.3-201ENST00000624242 PROM2Q8N271 834 aa13.09□□□□□ -0.31
AC116553.3-201ENST00000624242 LRRC4BQ9NT99 713 aa13.09□□□□□ -0.31
AC116553.3-201ENST00000624242 CHPF2Q9P2E5 772 aa13.09□□□□□ -0.31
AC116553.3-201ENST00000624242 LY75O60449 1722 aa13.08□□□□□ -0.32
AC116553.3-201ENST00000624242 A1BGP04217 495 aa13.08□□□□□ -0.32
AC116553.3-201ENST00000624242 SMIM5Q71RC9 77 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms