RNA–Protein interactions for RNA: ENST00000623529.1

LINC01561-202, Transcript of long intergenic non-protein coding RNA 1561, humanhuman

Gene LINC01561, Length 2,160 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561-202ENST00000623529 IFNL2Q8IZJ0 200 aa13.02□□□□□ -0.33
LINC01561-202ENST00000623529 DDX54Q8TDD1 881 aaKnown RBP13.02□□□□□ -0.33
LINC01561-202ENST00000623529 IRX6P78412 446 aaPredicted RBP13.01□□□□□ -0.33
LINC01561-202ENST00000623529 TAF7Q15545 349 aaPredicted RBP13.01□□□□□ -0.33
LINC01561-202ENST00000623529 USP21Q9UK80 565 aa13.01□□□□□ -0.33
LINC01561-202ENST00000623529 CCDC9Q9Y3X0 531 aaKnown RBP13.01□□□□□ -0.33
LINC01561-202ENST00000623529 RNF123Q5XPI4 1314 aa13.01□□□□□ -0.33
LINC01561-202ENST00000623529 NRAPQ86VF7 1730 aa13.01□□□□□ -0.33
LINC01561-202ENST00000623529 PLIN1O60240 522 aa13.01□□□□□ -0.33
LINC01561-202ENST00000623529 LRP5O75197 1615 aa13.01□□□□□ -0.33
LINC01561-202ENST00000623529 DISP2A7MBM2 1401 aa13□□□□□ -0.33
LINC01561-202ENST00000623529 KCNQ3O43525 872 aa13□□□□□ -0.33
LINC01561-202ENST00000623529 KDM6AO15550 1401 aaPredicted RBP13□□□□□ -0.33
LINC01561-202ENST00000623529 VAMP4O75379 141 aa13□□□□□ -0.33
LINC01561-202ENST00000623529 VPS72Q15906 364 aa13□□□□□ -0.33
LINC01561-202ENST00000623529 TAF7LQ5H9L4 462 aa13□□□□□ -0.33
LINC01561-202ENST00000623529 RARSP54136 660 aaKnown RBP12.99□□□□□ -0.33
LINC01561-202ENST00000623529 IFFO2Q5TF58 517 aa12.99□□□□□ -0.33
LINC01561-202ENST00000623529 NFATC2IPQ8NCF5 419 aa12.99□□□□□ -0.33
LINC01561-202ENST00000623529 TSPYL4Q9UJ04 414 aa12.99□□□□□ -0.33
LINC01561-202ENST00000623529 BCL2L13Q9BXK5 485 aa12.98□□□□□ -0.33
LINC01561-202ENST00000623529 THRAP3Q9Y2W1 955 aaKnown RBP12.98□□□□□ -0.33
LINC01561-202ENST00000623529 EXOC5O00471 708 aa12.98□□□□□ -0.33
LINC01561-202ENST00000623529 NKX1-1Q15270 411 aaPredicted RBP12.98□□□□□ -0.33
LINC01561-202ENST00000623529 FAM98CQ17RN3 349 aaKnown RBP12.98□□□□□ -0.33
LINC01561-202ENST00000623529 DCAF5Q96JK2 942 aa12.98□□□□□ -0.33
LINC01561-202ENST00000623529 PPP4R2Q9NY27 417 aa12.98□□□□□ -0.33
LINC01561-202ENST00000623529 TRPC5Q9UL62 973 aaPredicted RBP12.98□□□□□ -0.33
LINC01561-202ENST00000623529 PKD1L3Q7Z443 1732 aa12.98□□□□□ -0.33
LINC01561-202ENST00000623529 NWD2Q9ULI1 1742 aa12.98□□□□□ -0.33
LINC01561-202ENST00000623529 PLEKHG2Q9H7P9 1386 aa12.98□□□□□ -0.33
LINC01561-202ENST00000623529 PCDH11XQ9BZA7 1347 aa12.97□□□□□ -0.33
LINC01561-202ENST00000623529 PCDH11YQ9BZA8 1340 aa12.97□□□□□ -0.33
LINC01561-202ENST00000623529 KCNA4P22459 653 aa12.97□□□□□ -0.33
LINC01561-202ENST00000623529 TEFQ10587 303 aa12.97□□□□□ -0.33
LINC01561-202ENST00000623529 BARGINQ6ZT62 677 aa12.97□□□□□ -0.33
LINC01561-202ENST00000623529 BTBD11A6QL63 1104 aa12.97□□□□□ -0.33
LINC01561-202ENST00000623529 RTL5Q5HYW3 569 aaPredicted RBP12.97□□□□□ -0.33
LINC01561-202ENST00000623529 TCERG1O14776 1098 aaKnown RBP12.96□□□□□ -0.33
LINC01561-202ENST00000623529 RRP1P56182 461 aaKnown RBP12.96□□□□□ -0.33
LINC01561-202ENST00000623529 TWISTNBQ3B726 338 aaPredicted RBP12.96□□□□□ -0.33
LINC01561-202ENST00000623529 SSH1Q8WYL5 1049 aa12.96□□□□□ -0.33
LINC01561-202ENST00000623529 SLC52A2Q9HAB3 445 aa12.96□□□□□ -0.33
LINC01561-202ENST00000623529 NOP58Q9Y2X3 529 aaKnown RBP12.96□□□□□ -0.33
LINC01561-202ENST00000623529 LRRC37A3O60309 1634 aa12.96□□□□□ -0.34
LINC01561-202ENST00000623529 YY1P25490 414 aa12.96□□□□□ -0.34
LINC01561-202ENST00000623529 SLC39A6Q13433 755 aa12.96□□□□□ -0.34
LINC01561-202ENST00000623529 PARP4Q9UKK3 1724 aaKnown RBP12.96□□□□□ -0.34
LINC01561-202ENST00000623529 SHANK3Q9BYB0 1731 aa12.95□□□□□ -0.34
LINC01561-202ENST00000623529 C20orf194Q5TEA3 1177 aa12.95□□□□□ -0.34
LINC01561-202ENST00000623529 BABAM1Q9NWV8 329 aa12.95□□□□□ -0.34
LINC01561-202ENST00000623529 ADAMTS7Q9UKP4 1686 aa12.94□□□□□ -0.34
LINC01561-202ENST00000623529 HSP90AB1P08238 724 aaKnown RBP12.94□□□□□ -0.34
LINC01561-202ENST00000623529 EIF4A1P60842 406 aaKnown RBP12.94□□□□□ -0.34
LINC01561-202ENST00000623529 DDB1Q16531 1140 aa12.94□□□□□ -0.34
LINC01561-202ENST00000623529 MARCH10Q8NA82 808 aaPredicted RBP12.94□□□□□ -0.34
LINC01561-202ENST00000623529 GJD4Q96KN9 370 aaPredicted RBP12.94□□□□□ -0.34
LINC01561-202ENST00000623529 CT47B1P0C2W7 299 aaPredicted RBP12.94□□□□□ -0.34
LINC01561-202ENST00000623529 CDCA7Q9BWT1 371 aaPredicted RBP12.94□□□□□ -0.34
LINC01561-202ENST00000623529 VIRMAQ69YN4 1812 aaKnown RBP12.94□□□□□ -0.34
LINC01561-202ENST00000623529 CABP4P57796 275 aa12.93□□□□□ -0.34
LINC01561-202ENST00000623529 SCN11AQ9UI33 1791 aa12.93□□□□□ -0.34
LINC01561-202ENST00000623529 TNNQ9UQP3 1299 aa12.93□□□□□ -0.34
LINC01561-202ENST00000623529 PRAMEF22A3QJZ6 481 aa12.92□□□□□ -0.34
LINC01561-202ENST00000623529 ERVV-2B6SEH9 535 aa12.92□□□□□ -0.34
LINC01561-202ENST00000623529 FGD1P98174 961 aa12.92□□□□□ -0.34
LINC01561-202ENST00000623529 DEFB132Q7Z7B7 95 aa12.92□□□□□ -0.34
LINC01561-202ENST00000623529 FBXO3Q9UK99 471 aa12.92□□□□□ -0.34
LINC01561-202ENST00000623529 ZNF790Q6PG37 636 aa12.91□□□□□ -0.34
LINC01561-202ENST00000623529 FRAT1Q92837 279 aaPredicted RBP12.91□□□□□ -0.34
LINC01561-202ENST00000623529 ATRNO75882 1429 aa12.91□□□□□ -0.34
LINC01561-202ENST00000623529 ONECUT3O60422 494 aaPredicted RBP12.91□□□□□ -0.34
LINC01561-202ENST00000623529 SMC4Q9NTJ3 1288 aa12.91□□□□□ -0.34
LINC01561-202ENST00000623529 MRPL50Q8N5N7 158 aaKnown RBP12.9□□□□□ -0.34
LINC01561-202ENST00000623529 PIGBQ92521 554 aa12.9□□□□□ -0.34
LINC01561-202ENST00000623529 NECTIN2Q92692 538 aa12.9□□□□□ -0.34
LINC01561-202ENST00000623529 SIPA1L3O60292 1781 aaPredicted RBP12.9□□□□□ -0.34
LINC01561-202ENST00000623529 HEG1Q9ULI3 1381 aa12.9□□□□□ -0.34
LINC01561-202ENST00000623529 ALDH1L2Q3SY69 923 aa12.9□□□□□ -0.34
LINC01561-202ENST00000623529 TPRNQ4KMQ1 711 aa12.9□□□□□ -0.34
LINC01561-202ENST00000623529 FAM182BQ5T319 152 aa12.9□□□□□ -0.34
LINC01561-202ENST00000623529 NOB1Q9ULX3 412 aaKnown RBP12.9□□□□□ -0.34
LINC01561-202ENST00000623529 GLI3P10071 1580 aa12.89□□□□□ -0.35
LINC01561-202ENST00000623529 TNS2Q63HR2 1409 aa12.89□□□□□ -0.35
LINC01561-202ENST00000623529 KAT6BQ8WYB5 2073 aa12.89□□□□□ -0.35
LINC01561-202ENST00000623529 PSDA5PKW4 1024 aaPredicted RBP12.89□□□□□ -0.35
LINC01561-202ENST00000623529 GIGYF1O75420 1035 aaPredicted RBP12.89□□□□□ -0.35
LINC01561-202ENST00000623529 PRIM1P49642 420 aaKnown RBP12.89□□□□□ -0.35
LINC01561-202ENST00000623529 SF3B2Q13435 895 aaKnown RBP12.89□□□□□ -0.35
LINC01561-202ENST00000623529 ZNF428Q96B54 188 aa12.89□□□□□ -0.35
LINC01561-202ENST00000623529 ZNF496Q96IT1 587 aaPredicted RBP12.89□□□□□ -0.35
LINC01561-202ENST00000623529 WNK3Q9BYP7 1800 aa12.89□□□□□ -0.35
LINC01561-202ENST00000623529 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.89□□□□□ -0.35
LINC01561-202ENST00000623529 MRC1P22897 1456 aa12.88□□□□□ -0.35
LINC01561-202ENST00000623529 A0A0G2JS52 829 aa12.88□□□□□ -0.35
LINC01561-202ENST00000623529 RLBP1P12271 317 aa12.88□□□□□ -0.35
LINC01561-202ENST00000623529 ANP32AP39687 249 aaKnown RBP12.88□□□□□ -0.35
LINC01561-202ENST00000623529 BRPF1P55201 1214 aaPredicted RBP12.88□□□□□ -0.35
LINC01561-202ENST00000623529 ACSBG1Q96GR2 724 aa12.88□□□□□ -0.35
LINC01561-202ENST00000623529 ASAP1Q9ULH1 1129 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms