RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 RGS12O14924 1447 aa15.85■□□□□ 0.13
CHD1L-210ENST00000622533 MLECQ14165 292 aa15.85■□□□□ 0.13
CHD1L-210ENST00000622533 FOXD4L6Q3SYB3 417 aaPredicted RBP15.85■□□□□ 0.13
CHD1L-210ENST00000622533 FOXD4L3Q6VB84 417 aaPredicted RBP15.85■□□□□ 0.13
CHD1L-210ENST00000622533 TECPR2O15040 1411 aa15.85■□□□□ 0.13
CHD1L-210ENST00000622533 FAM83GA6ND36 823 aa15.84■□□□□ 0.13
CHD1L-210ENST00000622533 RTL1A6NKG5 1358 aa15.84■□□□□ 0.13
CHD1L-210ENST00000622533 CPS1P31327 1500 aa15.84■□□□□ 0.13
CHD1L-210ENST00000622533 HDGFP51858 240 aaKnown RBP15.84■□□□□ 0.13
CHD1L-210ENST00000622533 RRS1Q15050 365 aaKnown RBP15.84■□□□□ 0.13
CHD1L-210ENST00000622533 C16orf71Q8IYS4 520 aaPredicted RBP15.84■□□□□ 0.13
CHD1L-210ENST00000622533 SDSP20132 328 aa15.83■□□□□ 0.12
CHD1L-210ENST00000622533 TPRNQ4KMQ1 711 aa15.83■□□□□ 0.12
CHD1L-210ENST00000622533 TTC12Q9H892 705 aaPredicted RBP15.83■□□□□ 0.12
CHD1L-210ENST00000622533 NRXN3Q9Y4C0 1643 aa15.82■□□□□ 0.12
CHD1L-210ENST00000622533 TSPY26PQ9H489 355 aa15.82■□□□□ 0.12
CHD1L-210ENST00000622533 MSH6P52701 1360 aa15.82■□□□□ 0.12
CHD1L-210ENST00000622533 ERC2O15083 957 aa15.82■□□□□ 0.12
CHD1L-210ENST00000622533 DCTN1Q14203 1278 aa15.82■□□□□ 0.12
CHD1L-210ENST00000622533 OSBPL3Q9H4L5 887 aa15.82■□□□□ 0.12
CHD1L-210ENST00000622533 ZRANB1Q9UGI0 708 aa15.82■□□□□ 0.12
CHD1L-210ENST00000622533 NOLC1Q14978 699 aaKnown RBP eCLIP15.81■□□□□ 0.124e-7■■■■□ 25.6
CHD1L-210ENST00000622533 BBXQ8WY36 941 aaPredicted RBP15.81■□□□□ 0.12
CHD1L-210ENST00000622533 MCM2P49736 904 aa15.81■□□□□ 0.12
CHD1L-210ENST00000622533 EIF4A2Q14240 407 aaKnown RBP15.81■□□□□ 0.12
CHD1L-210ENST00000622533 SULT6B1Q6IMI4 303 aa15.81■□□□□ 0.12
CHD1L-210ENST00000622533 CCT4P50991 539 aaKnown RBP15.8■□□□□ 0.12
CHD1L-210ENST00000622533 OTUD7AQ8TE49 926 aaPredicted RBP15.8■□□□□ 0.12
CHD1L-210ENST00000622533 GTPBP4Q9BZE4 634 aaKnown RBP15.8■□□□□ 0.12
CHD1L-210ENST00000622533 GDPD2Q9HCC8 539 aa15.8■□□□□ 0.12
CHD1L-210ENST00000622533 TTC21BQ7Z4L5 1316 aa15.8■□□□□ 0.12
CHD1L-210ENST00000622533 USP25Q9UHP3 1055 aa15.79■□□□□ 0.12
CHD1L-210ENST00000622533 METP08581 1390 aa15.79■□□□□ 0.12
CHD1L-210ENST00000622533 APBB1O00213 710 aa15.79■□□□□ 0.12
CHD1L-210ENST00000622533 TXNDC2Q86VQ3 553 aa15.79■□□□□ 0.12
CHD1L-210ENST00000622533 PIBF1Q8WXW3 757 aa15.79■□□□□ 0.12
CHD1L-210ENST00000622533 PRIMPOLQ96LW4 560 aa15.79■□□□□ 0.12
CHD1L-210ENST00000622533 BCL2L12Q9HB09 334 aa15.79■□□□□ 0.12
CHD1L-210ENST00000622533 KIF3AQ9Y496 699 aa15.79■□□□□ 0.12
CHD1L-210ENST00000622533 NOL8Q76FK4 1167 aaKnown RBP15.78■□□□□ 0.12
CHD1L-210ENST00000622533 MEIS3Q99687 375 aa15.78■□□□□ 0.12
CHD1L-210ENST00000622533 ARHGEF10O15013 1369 aa15.77■□□□□ 0.12
CHD1L-210ENST00000622533 MBD3O95983 291 aa15.77■□□□□ 0.12
CHD1L-210ENST00000622533 MCCP23508 829 aa15.77■□□□□ 0.12
CHD1L-210ENST00000622533 HMGN5P82970 282 aaKnown RBP15.77■□□□□ 0.12
CHD1L-210ENST00000622533 GADD45BO75293 160 aaPredicted RBP15.77■□□□□ 0.11
CHD1L-210ENST00000622533 OVOS2A0A0J9YW53 1432 aa15.76■□□□□ 0.11
CHD1L-210ENST00000622533 CRB1P82279 1406 aa15.76■□□□□ 0.11
CHD1L-210ENST00000622533 OVOS2Q6IE36 1432 aa15.76■□□□□ 0.11
CHD1L-210ENST00000622533 SLC4A2P04920 1241 aa15.76■□□□□ 0.11
CHD1L-210ENST00000622533 U2AF2P26368 475 aaKnown RBP eCLIP15.76■□□□□ 0.113e-7■■■□□ 14.6
CHD1L-210ENST00000622533 AEBP1Q8IUX7 1158 aa15.76■□□□□ 0.11
CHD1L-210ENST00000622533 RGPD1P0DJD0 1748 aa15.76■□□□□ 0.11
CHD1L-210ENST00000622533 SMARCA5O60264 1052 aaPredicted RBP15.76■□□□□ 0.11
CHD1L-210ENST00000622533 GTF2E1P29083 439 aaPredicted RBP15.76■□□□□ 0.11
CHD1L-210ENST00000622533 GTF2F1P35269 517 aaKnown RBP eCLIP15.76■□□□□ 0.11
CHD1L-210ENST00000622533 PDE1AP54750 535 aa15.76■□□□□ 0.11
CHD1L-210ENST00000622533 KIF20AO95235 890 aa15.75■□□□□ 0.11
CHD1L-210ENST00000622533 MCM10Q7L590 875 aa15.75■□□□□ 0.11
CHD1L-210ENST00000622533 PDCL2Q8N4E4 241 aa15.75■□□□□ 0.11
CHD1L-210ENST00000622533 ANAPC15P60006 121 aa15.75■□□□□ 0.11
CHD1L-210ENST00000622533 LETM1O95202 739 aaPredicted RBP15.74■□□□□ 0.11
CHD1L-210ENST00000622533 ADCY5O95622 1261 aa15.74■□□□□ 0.11
CHD1L-210ENST00000622533 GNAI2P04899 355 aa15.74■□□□□ 0.11
CHD1L-210ENST00000622533 PLCB2Q00722 1185 aa15.74■□□□□ 0.11
CHD1L-210ENST00000622533 RTF1Q92541 710 aaKnown RBP15.74■□□□□ 0.11
CHD1L-210ENST00000622533 NALCNQ8IZF0 1738 aa15.74■□□□□ 0.11
CHD1L-210ENST00000622533 KRT24Q2M2I5 525 aa15.74■□□□□ 0.11
CHD1L-210ENST00000622533 USP31Q70CQ4 1352 aa15.74■□□□□ 0.11
CHD1L-210ENST00000622533 SSH2Q76I76 1423 aa15.74■□□□□ 0.11
CHD1L-210ENST00000622533 PLEKHG3A1L390 1219 aa15.73■□□□□ 0.11
CHD1L-210ENST00000622533 EPB41L2O43491 1005 aaKnown RBP15.73■□□□□ 0.11
CHD1L-210ENST00000622533 NEK4P51957 841 aa15.73■□□□□ 0.11
CHD1L-210ENST00000622533 TMX3Q96JJ7 454 aa15.73■□□□□ 0.11
CHD1L-210ENST00000622533 PRR36Q9H6K5 1346 aa15.73■□□□□ 0.11
CHD1L-210ENST00000622533 GNAI3P08754 354 aa15.73■□□□□ 0.11
CHD1L-210ENST00000622533 SOS1Q07889 1333 aaPredicted RBP15.73■□□□□ 0.11
CHD1L-210ENST00000622533 INTS4Q96HW7 963 aaKnown RBP15.72■□□□□ 0.11
CHD1L-210ENST00000622533 SRCIN1Q9C0H9 1055 aa15.72■□□□□ 0.11
CHD1L-210ENST00000622533 NCKAP5LQ9HCH0 1330 aa15.72■□□□□ 0.11
CHD1L-210ENST00000622533 TOPAZ1Q8N9V7 1692 aa15.72■□□□□ 0.11
CHD1L-210ENST00000622533 FKBP5Q13451 457 aaPredicted RBP15.72■□□□□ 0.11
CHD1L-210ENST00000622533 STK31Q9BXU1 1019 aa15.72■□□□□ 0.11
CHD1L-210ENST00000622533 TSPYL4Q9UJ04 414 aa15.72■□□□□ 0.11
CHD1L-210ENST00000622533 LRRCC1Q9C099 1032 aa15.71■□□□□ 0.11
CHD1L-210ENST00000622533 RIOK3O14730 519 aaKnown RBP15.71■□□□□ 0.11
CHD1L-210ENST00000622533 BRD1O95696 1058 aa15.71■□□□□ 0.11
CHD1L-210ENST00000622533 HCLS1P14317 486 aaPredicted RBP15.71■□□□□ 0.11
CHD1L-210ENST00000622533 USP6P35125 1406 aa15.71■□□□□ 0.11
CHD1L-210ENST00000622533 ESYT1Q9BSJ8 1104 aa15.71■□□□□ 0.11
CHD1L-210ENST00000622533 ZBTB22O15209 634 aa15.71■□□□□ 0.1
CHD1L-210ENST00000622533 HTATSF1O43719 755 aaKnown RBP15.71■□□□□ 0.1
CHD1L-210ENST00000622533 CUL4AQ13619 759 aa15.71■□□□□ 0.1
CHD1L-210ENST00000622533 SYAP1Q96A49 352 aaPredicted RBP15.71■□□□□ 0.1
CHD1L-210ENST00000622533 IL17RAQ96F46 866 aa15.71■□□□□ 0.1
CHD1L-210ENST00000622533 ACEP12821 1306 aa15.7■□□□□ 0.1
CHD1L-210ENST00000622533 PDE4CQ08493 712 aa15.7■□□□□ 0.1
CHD1L-210ENST00000622533 FAM69CQ0P6D2 419 aa15.7■□□□□ 0.1
CHD1L-210ENST00000622533 SLC4A10Q6U841 1118 aa15.7■□□□□ 0.1
CHD1L-210ENST00000622533 USP48Q86UV5 1035 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms