RNA–Protein interactions for RNA: ENST00000622383.1

NKX2-3-202, Transcript of NK2 homeobox 3, humanhuman

TSL 5 BASIC

Gene NKX2-3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-202ENST00000622383 PLEKHG5O94827 1062 aa28.34■■■□□ 2.13
NKX2-3-202ENST00000622383 EIF4A1P60842 406 aaKnown RBP28.34■■■□□ 2.13
NKX2-3-202ENST00000622383 AKAP4Q5JQC9 854 aa28.34■■■□□ 2.13
NKX2-3-202ENST00000622383 LMOD2Q6P5Q4 547 aa28.34■■■□□ 2.13
NKX2-3-202ENST00000622383 KIF2CQ99661 725 aa28.34■■■□□ 2.13
NKX2-3-202ENST00000622383 APBB1O00213 710 aa28.33■■■□□ 2.13
NKX2-3-202ENST00000622383 PLEKHO1Q53GL0 409 aaPredicted RBP28.33■■■□□ 2.13
NKX2-3-202ENST00000622383 ZNF530Q6P9A1 599 aaPredicted RBP28.33■■■□□ 2.13
NKX2-3-202ENST00000622383 BCL11AQ9H165 835 aa28.33■■■□□ 2.13
NKX2-3-202ENST00000622383 GNAI3P08754 354 aa28.32■■■□□ 2.12
NKX2-3-202ENST00000622383 ANKRD24Q8TF21 1146 aa28.32■■■□□ 2.12
NKX2-3-202ENST00000622383 SNX21Q969T3 373 aa28.31■■■□□ 2.12
NKX2-3-202ENST00000622383 AXIN2Q9Y2T1 843 aa28.31■■■□□ 2.12
NKX2-3-202ENST00000622383 LMO7Q8WWI1 1683 aa28.31■■■□□ 2.12
NKX2-3-202ENST00000622383 PXDNLA1KZ92 1463 aa28.31■■■□□ 2.12
NKX2-3-202ENST00000622383 AMOTQ4VCS5 1084 aa28.31■■■□□ 2.12
NKX2-3-202ENST00000622383 MST1RQ04912 1400 aa28.3■■■□□ 2.12
NKX2-3-202ENST00000622383 HSCBQ8IWL3 235 aa28.3■■■□□ 2.12
NKX2-3-202ENST00000622383 SPRYD3Q8NCJ5 442 aa28.3■■■□□ 2.12
NKX2-3-202ENST00000622383 PHAXQ9H814 394 aaKnown RBP28.3■■■□□ 2.12
NKX2-3-202ENST00000622383 KCNQ3O43525 872 aa28.3■■■□□ 2.12
NKX2-3-202ENST00000622383 KIF1AQ12756 1690 aa28.29■■■□□ 2.12
NKX2-3-202ENST00000622383 HOXB7P09629 217 aa28.29■■■□□ 2.12
NKX2-3-202ENST00000622383 MPRIPQ6WCQ1 1025 aa28.29■■■□□ 2.12
NKX2-3-202ENST00000622383 PXDNQ92626 1479 aa28.29■■■□□ 2.12
NKX2-3-202ENST00000622383 CACNA1FO60840 1977 aa28.28■■■□□ 2.12
NKX2-3-202ENST00000622383 KDM3BQ7LBC6 1761 aa28.28■■■□□ 2.12
NKX2-3-202ENST00000622383 GSE1Q14687 1217 aa28.28■■■□□ 2.12
NKX2-3-202ENST00000622383 TEFQ10587 303 aa28.27■■■□□ 2.12
NKX2-3-202ENST00000622383 USP44Q9H0E7 712 aa28.27■■■□□ 2.12
NKX2-3-202ENST00000622383 ATP8B2P98198 1209 aa28.26■■■□□ 2.11
NKX2-3-202ENST00000622383 PNMA6EA0A0J9YXQ4 647 aa28.26■■■□□ 2.11
NKX2-3-202ENST00000622383 RNMTO43148 476 aaKnown RBP28.26■■■□□ 2.11
NKX2-3-202ENST00000622383 EIF2S2P20042 333 aaKnown RBP28.26■■■□□ 2.11
NKX2-3-202ENST00000622383 SDSP20132 328 aa28.26■■■□□ 2.11
NKX2-3-202ENST00000622383 CAMTA1Q9Y6Y1 1673 aa28.26■■■□□ 2.11
NKX2-3-202ENST00000622383 N4BP2Q86UW6 1770 aaPredicted RBP28.25■■■□□ 2.11
NKX2-3-202ENST00000622383 BTBD11A6QL63 1104 aa28.25■■■□□ 2.11
NKX2-3-202ENST00000622383 NCOA3Q9Y6Q9 1424 aa28.25■■■□□ 2.11
NKX2-3-202ENST00000622383 EXOC6BQ9Y2D4 811 aa28.24■■■□□ 2.11
NKX2-3-202ENST00000622383 OSBPL3Q9H4L5 887 aa28.24■■■□□ 2.11
NKX2-3-202ENST00000622383 LRRFIP2Q9Y608 721 aaKnown RBP28.24■■■□□ 2.11
NKX2-3-202ENST00000622383 C1orf141Q5JVX7 400 aa28.23■■■□□ 2.11
NKX2-3-202ENST00000622383 CHPF2Q9P2E5 772 aa28.23■■■□□ 2.11
NKX2-3-202ENST00000622383 OVOS2A0A0G2JMS6 1433 aa28.23■■■□□ 2.11
NKX2-3-202ENST00000622383 EIF5BO60841 1220 aaKnown RBP28.22■■■□□ 2.11
NKX2-3-202ENST00000622383 TMEM94Q12767 1356 aa28.21■■■□□ 2.11
NKX2-3-202ENST00000622383 ALS2Q96Q42 1657 aa28.21■■■□□ 2.11
NKX2-3-202ENST00000622383 CHMP5Q9NZZ3 219 aa28.21■■■□□ 2.11
NKX2-3-202ENST00000622383 KDM4FA0A1W2PPD8 638 aa28.2■■■□□ 2.11
NKX2-3-202ENST00000622383 PDE1AP54750 535 aa28.2■■■□□ 2.11
NKX2-3-202ENST00000622383 ERBB3P21860 1342 aa28.2■■■□□ 2.11
NKX2-3-202ENST00000622383 SALL3Q9BXA9 1300 aa28.2■■■□□ 2.11
NKX2-3-202ENST00000622383 CHMP4AQ9BY43 222 aa28.2■■■□□ 2.1
NKX2-3-202ENST00000622383 UBTFL1P0CB47 393 aaPredicted RBP28.19■■■□□ 2.1
NKX2-3-202ENST00000622383 ATF3P18847 181 aa28.19■■■□□ 2.1
NKX2-3-202ENST00000622383 DDIT3P35638 169 aa28.19■■■□□ 2.1
NKX2-3-202ENST00000622383 ZC3H6P61129 1189 aaKnown RBP28.19■■■□□ 2.1
NKX2-3-202ENST00000622383 IBTKQ9P2D0 1353 aaPredicted RBP28.19■■■□□ 2.1
NKX2-3-202ENST00000622383 CD2BP2O95400 341 aaKnown RBP28.19■■■□□ 2.1
NKX2-3-202ENST00000622383 LRRCC1Q9C099 1032 aa28.19■■■□□ 2.1
NKX2-3-202ENST00000622383 RBM42Q9BTD8 480 aaKnown RBP28.18■■■□□ 2.1
NKX2-3-202ENST00000622383 SRCIN1Q9C0H9 1055 aa28.18■■■□□ 2.1
NKX2-3-202ENST00000622383 DDX17Q92841 729 aaKnown RBP28.17■■■□□ 2.1
NKX2-3-202ENST00000622383 USP26Q9BXU7 913 aa28.17■■■□□ 2.1
NKX2-3-202ENST00000622383 HEG1Q9ULI3 1381 aa28.17■■■□□ 2.1
NKX2-3-202ENST00000622383 DCCP43146 1447 aa28.16■■■□□ 2.1
NKX2-3-202ENST00000622383 BEND3Q5T5X7 828 aa28.15■■■□□ 2.1
NKX2-3-202ENST00000622383 LMTK3Q96Q04 1460 aa28.15■■■□□ 2.1
NKX2-3-202ENST00000622383 PI4KAP2A4QPH2 592 aa28.15■■■□□ 2.1
NKX2-3-202ENST00000622383 ANXA1P04083 346 aa28.15■■■□□ 2.1
NKX2-3-202ENST00000622383 PI4KAP1Q8N8J0 262 aa28.15■■■□□ 2.1
NKX2-3-202ENST00000622383 SSH3Q8TE77 659 aa28.15■■■□□ 2.1
NKX2-3-202ENST00000622383 DNAAF4Q8WXU2 420 aa28.15■■■□□ 2.1
NKX2-3-202ENST00000622383 STRCP1A6NGW2 1772 aa28.14■■■□□ 2.1
NKX2-3-202ENST00000622383 GIGYF1O75420 1035 aaPredicted RBP28.14■■■□□ 2.1
NKX2-3-202ENST00000622383 CASC1Q6TDU7 716 aa28.13■■■□□ 2.09
NKX2-3-202ENST00000622383 ADCY9O60503 1353 aa28.13■■■□□ 2.09
NKX2-3-202ENST00000622383 DBF4Q9UBU7 674 aaPredicted RBP28.13■■■□□ 2.09
NKX2-3-202ENST00000622383 RGPD5Q99666 1765 aa28.12■■■□□ 2.09
NKX2-3-202ENST00000622383 HSP90AB1P08238 724 aaKnown RBP28.12■■■□□ 2.09
NKX2-3-202ENST00000622383 TSHZ3Q63HK5 1081 aa28.11■■■□□ 2.09
NKX2-3-202ENST00000622383 ADAMTS7Q9UKP4 1686 aa28.11■■■□□ 2.09
NKX2-3-202ENST00000622383 NBPF7P0C2Y1 421 aaPredicted RBP28.11■■■□□ 2.09
NKX2-3-202ENST00000622383 MX1P20591 662 aa28.11■■■□□ 2.09
NKX2-3-202ENST00000622383 POLA2Q14181 598 aa28.11■■■□□ 2.09
NKX2-3-202ENST00000622383 K7ELQ4 463 aaPredicted RBP28.1■■■□□ 2.09
NKX2-3-202ENST00000622383 PPP1R42Q7Z4L9 355 aa28.1■■■□□ 2.09
NKX2-3-202ENST00000622383 PRAMEF22A3QJZ6 481 aa28.09■■■□□ 2.09
NKX2-3-202ENST00000622383 PROSER3Q2NL68 480 aa28.09■■■□□ 2.09
NKX2-3-202ENST00000622383 STAP2Q9UGK3 403 aa28.09■■■□□ 2.09
NKX2-3-202ENST00000622383 MCM4P33991 863 aa28.08■■■□□ 2.09
NKX2-3-202ENST00000622383 RABEP1Q15276 862 aa28.08■■■□□ 2.09
NKX2-3-202ENST00000622383 SIPA1L3O60292 1781 aaPredicted RBP28.08■■■□□ 2.09
NKX2-3-202ENST00000622383 NLRP2Q9NX02 1062 aa28.08■■■□□ 2.09
NKX2-3-202ENST00000622383 CADPS2Q86UW7 1296 aa28.07■■■□□ 2.08
NKX2-3-202ENST00000622383 RAPGEF4Q8WZA2 1011 aa28.07■■■□□ 2.08
NKX2-3-202ENST00000622383 NPHP3Q7Z494 1330 aa28.07■■■□□ 2.08
NKX2-3-202ENST00000622383 ERC2O15083 957 aa28.06■■■□□ 2.08
NKX2-3-202ENST00000622383 REC8O95072 547 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms