RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 ATP2B2Q01814 1243 aa10.02□□□□□ -0.81
PTPDC1-204ENST00000620992 SNX21Q969T3 373 aa10.02□□□□□ -0.81
PTPDC1-204ENST00000620992 BCL11BQ9C0K0 894 aaPredicted RBP10.02□□□□□ -0.81
PTPDC1-204ENST00000620992 GRPEL1Q9HAV7 217 aa10.02□□□□□ -0.81
PTPDC1-204ENST00000620992 CCDC61Q9Y6R9 512 aa10.02□□□□□ -0.81
PTPDC1-204ENST00000620992 MYO5BQ9ULV0 1848 aa10.02□□□□□ -0.81
PTPDC1-204ENST00000620992 SMARCA5O60264 1052 aaPredicted RBP10.02□□□□□ -0.81
PTPDC1-204ENST00000620992 TATP17735 454 aaPredicted RBP10.02□□□□□ -0.81
PTPDC1-204ENST00000620992 IKQ13123 557 aaPredicted RBP10.02□□□□□ -0.81
PTPDC1-204ENST00000620992 PPP6R1Q9UPN7 881 aa10.02□□□□□ -0.81
PTPDC1-204ENST00000620992 VPS37CA5D8V6 355 aaPredicted RBP10.02□□□□□ -0.81
PTPDC1-204ENST00000620992 ST18O60284 1047 aa10.02□□□□□ -0.81
PTPDC1-204ENST00000620992 CABP4P57796 275 aa10.02□□□□□ -0.81
PTPDC1-204ENST00000620992 CHRNA2Q15822 529 aa10.02□□□□□ -0.81
PTPDC1-204ENST00000620992 RRP12Q5JTH9 1297 aaKnown RBP10.02□□□□□ -0.81
PTPDC1-204ENST00000620992 NFXL1Q6ZNB6 911 aa10.02□□□□□ -0.81
PTPDC1-204ENST00000620992 NGLY1Q96IV0 654 aa10.01□□□□□ -0.81
PTPDC1-204ENST00000620992 SSFA2P28290 1259 aa10.01□□□□□ -0.81
PTPDC1-204ENST00000620992 MAP4K4O95819 1239 aaPredicted RBP10.01□□□□□ -0.81
PTPDC1-204ENST00000620992 MED14O60244 1454 aa10.01□□□□□ -0.81
PTPDC1-204ENST00000620992 ARHGEF40Q8TER5 1519 aa10□□□□□ -0.81
PTPDC1-204ENST00000620992 GAS2L2Q8NHY3 880 aa10□□□□□ -0.81
PTPDC1-204ENST00000620992 ZNF692Q9BU19 519 aaPredicted RBP10□□□□□ -0.81
PTPDC1-204ENST00000620992 ALKQ9UM73 1620 aa10□□□□□ -0.81
PTPDC1-204ENST00000620992 MSNP26038 577 aaKnown RBP10□□□□□ -0.81
PTPDC1-204ENST00000620992 MPRIPQ6WCQ1 1025 aa10□□□□□ -0.81
PTPDC1-204ENST00000620992 OTUD7AQ8TE49 926 aaPredicted RBP10□□□□□ -0.81
PTPDC1-204ENST00000620992 DDX49Q9Y6V7 483 aaKnown RBP10□□□□□ -0.81
PTPDC1-204ENST00000620992 ABCC4O15439 1325 aa10□□□□□ -0.81
PTPDC1-204ENST00000620992 FSD2A1L4K1 749 aa10□□□□□ -0.81
PTPDC1-204ENST00000620992 PLEKHO1Q53GL0 409 aaPredicted RBP10□□□□□ -0.81
PTPDC1-204ENST00000620992 SYNE3Q6ZMZ3 975 aa10□□□□□ -0.81
PTPDC1-204ENST00000620992 FBXO3Q9UK99 471 aa10□□□□□ -0.81
PTPDC1-204ENST00000620992 CIZ1Q9ULV3 898 aaPredicted RBP10□□□□□ -0.81
PTPDC1-204ENST00000620992 RIMS2Q9UQ26 1411 aa10□□□□□ -0.81
PTPDC1-204ENST00000620992 GSPT1P15170 499 aaKnown RBP10□□□□□ -0.81
PTPDC1-204ENST00000620992 PLEKHM2Q8IWE5 1019 aa10□□□□□ -0.81
PTPDC1-204ENST00000620992 ZKSCAN1P17029 563 aaPredicted RBP9.99□□□□□ -0.81
PTPDC1-204ENST00000620992 BRPF1P55201 1214 aaPredicted RBP9.99□□□□□ -0.81
PTPDC1-204ENST00000620992 KIF2CQ99661 725 aa9.99□□□□□ -0.81
PTPDC1-204ENST00000620992 CWC22Q9HCG8 908 aaKnown RBP9.99□□□□□ -0.81
PTPDC1-204ENST00000620992 ZNF853P0CG23 659 aa9.99□□□□□ -0.81
PTPDC1-204ENST00000620992 TRDNQ13061 729 aa9.99□□□□□ -0.81
PTPDC1-204ENST00000620992 RAB3GAP1Q15042 981 aa9.99□□□□□ -0.81
PTPDC1-204ENST00000620992 TCEAL9Q9UHQ7 104 aa9.98□□□□□ -0.81
PTPDC1-204ENST00000620992 EIF4A2Q14240 407 aaKnown RBP9.98□□□□□ -0.81
PTPDC1-204ENST00000620992 INTS3Q68E01 1043 aaKnown RBP9.98□□□□□ -0.81
PTPDC1-204ENST00000620992 MEIS3Q99687 375 aa9.98□□□□□ -0.81
PTPDC1-204ENST00000620992 CNNM1Q9NRU3 951 aa9.98□□□□□ -0.81
PTPDC1-204ENST00000620992 TMEM131LA2VDJ0 1609 aa9.98□□□□□ -0.81
PTPDC1-204ENST00000620992 SKOR2Q2VWA4 1001 aaPredicted RBP9.98□□□□□ -0.81
PTPDC1-204ENST00000620992 HSP90AB2PQ58FF8 381 aa9.98□□□□□ -0.81
PTPDC1-204ENST00000620992 EDC4Q6P2E9 1401 aaKnown RBP9.98□□□□□ -0.81
PTPDC1-204ENST00000620992 F6X3S4 739 aa9.98□□□□□ -0.81
PTPDC1-204ENST00000620992 DCTPP1Q9H773 170 aa9.98□□□□□ -0.81
PTPDC1-204ENST00000620992 IL1RAPL2Q9NP60 686 aa9.98□□□□□ -0.81
PTPDC1-204ENST00000620992 TTC22Q5TAA0 569 aa9.97□□□□□ -0.81
PTPDC1-204ENST00000620992 AMOTL2Q9Y2J4 779 aa9.97□□□□□ -0.81
PTPDC1-204ENST00000620992 PTCH1Q13635 1447 aa9.97□□□□□ -0.81
PTPDC1-204ENST00000620992 METP08581 1390 aa9.97□□□□□ -0.81
PTPDC1-204ENST00000620992 MAP2P11137 1827 aaKnown RBP9.97□□□□□ -0.81
PTPDC1-204ENST00000620992 FSD1Q9BTV5 496 aa9.97□□□□□ -0.81
PTPDC1-204ENST00000620992 PREX1Q8TCU6 1659 aa9.97□□□□□ -0.81
PTPDC1-204ENST00000620992 RABEP1Q15276 862 aa9.97□□□□□ -0.81
PTPDC1-204ENST00000620992 ATP7BP35670 1465 aa9.97□□□□□ -0.81
PTPDC1-204ENST00000620992 GAS2L3Q86XJ1 694 aa9.96□□□□□ -0.81
PTPDC1-204ENST00000620992 CLASRPQ8N2M8 674 aaKnown RBP9.96□□□□□ -0.81
PTPDC1-204ENST00000620992 IBSPP21815 317 aaPredicted RBP9.96□□□□□ -0.81
PTPDC1-204ENST00000620992 RBM5P52756 815 aaKnown RBP eCLIP9.96□□□□□ -0.81
PTPDC1-204ENST00000620992 CPLX2Q6PUV4 134 aaKnown RBP9.96□□□□□ -0.81
PTPDC1-204ENST00000620992 AMOTL1Q8IY63 956 aa9.96□□□□□ -0.81
PTPDC1-204ENST00000620992 NOC3LQ8WTT2 800 aaKnown RBP9.96□□□□□ -0.81
PTPDC1-204ENST00000620992 PIBF1Q8WXW3 757 aa9.96□□□□□ -0.81
PTPDC1-204ENST00000620992 SDSP20132 328 aa9.96□□□□□ -0.82
PTPDC1-204ENST00000620992 ANKRD44Q8N8A2 993 aa9.96□□□□□ -0.82
PTPDC1-204ENST00000620992 PTMSP20962 102 aa9.96□□□□□ -0.82
PTPDC1-204ENST00000620992 TSHZ3Q63HK5 1081 aa9.96□□□□□ -0.82
PTPDC1-204ENST00000620992 CEP85Q6P2H3 762 aa9.96□□□□□ -0.82
PTPDC1-204ENST00000620992 RPAP2Q8IXW5 612 aaPredicted RBP9.96□□□□□ -0.82
PTPDC1-204ENST00000620992 JARID2Q92833 1246 aaPredicted RBP9.96□□□□□ -0.82
PTPDC1-204ENST00000620992 HTATSF1O43719 755 aaKnown RBP9.95□□□□□ -0.82
PTPDC1-204ENST00000620992 RALYLQ86SE5 291 aaKnown RBP9.95□□□□□ -0.82
PTPDC1-204ENST00000620992 CABLES1Q8TDN4 633 aa9.95□□□□□ -0.82
PTPDC1-204ENST00000620992 ANXA1P04083 346 aa9.95□□□□□ -0.82
PTPDC1-204ENST00000620992 DDIT3P35638 169 aa9.95□□□□□ -0.82
PTPDC1-204ENST00000620992 FKBP4Q02790 459 aaKnown RBP eCLIP9.95□□□□□ -0.82
PTPDC1-204ENST00000620992 TPD52L1Q16890 204 aaPredicted RBP9.95□□□□□ -0.82
PTPDC1-204ENST00000620992 MSH6P52701 1360 aa9.95□□□□□ -0.82
PTPDC1-204ENST00000620992 BAG4O95429 457 aaKnown RBP9.95□□□□□ -0.82
PTPDC1-204ENST00000620992 CHAF1AQ13111 956 aaPredicted RBP9.95□□□□□ -0.82
PTPDC1-204ENST00000620992 GLIPR1L2Q4G1C9 344 aa9.95□□□□□ -0.82
PTPDC1-204ENST00000620992 EXOC6BQ9Y2D4 811 aa9.95□□□□□ -0.82
PTPDC1-204ENST00000620992 KIF20BQ96Q89 1820 aa9.95□□□□□ -0.82
PTPDC1-204ENST00000620992 CAVIN1Q6NZI2 390 aaKnown RBP9.94□□□□□ -0.82
PTPDC1-204ENST00000620992 PIK3R4Q99570 1358 aa9.94□□□□□ -0.82
PTPDC1-204ENST00000620992 CCDC30Q5VVM6 783 aa9.94□□□□□ -0.82
PTPDC1-204ENST00000620992 ACEP12821 1306 aa9.94□□□□□ -0.82
PTPDC1-204ENST00000620992 ANKRD26Q9UPS8 1709 aa9.94□□□□□ -0.82
PTPDC1-204ENST00000620992 ESPNB1AK53 854 aa9.94□□□□□ -0.82
PTPDC1-204ENST00000620992 REC8O95072 547 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms