RNA–Protein interactions for RNA: ENST00000620962.1

ITM2C-210, Transcript of integral membrane protein 2C, humanhuman

BASIC

Gene ITM2C, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-210ENST00000620962 GNPATO15228 680 aa27.61■■■□□ 2.01
ITM2C-210ENST00000620962 EIF4G2P78344 907 aaKnown RBP eCLIP27.61■■■□□ 2.01
ITM2C-210ENST00000620962 ATP10DQ9P241 1426 aa27.6■■■□□ 2.01
ITM2C-210ENST00000620962 ERVV-2B6SEH9 535 aa27.6■■■□□ 2.01
ITM2C-210ENST00000620962 HSP90AB1P08238 724 aaKnown RBP27.59■■■□□ 2.01
ITM2C-210ENST00000620962 PANK3Q9H999 370 aa27.58■■■□□ 2.01
ITM2C-210ENST00000620962 ADCY9O60503 1353 aa27.58■■■□□ 2.01
ITM2C-210ENST00000620962 DCAF5Q96JK2 942 aa27.57■■■□□ 2
ITM2C-210ENST00000620962 PCGF6Q9BYE7 350 aa27.57■■■□□ 2
ITM2C-210ENST00000620962 COL5A3P25940 1745 aaPredicted RBP27.57■■■□□ 2
ITM2C-210ENST00000620962 KIF13BQ9NQT8 1826 aa27.57■■■□□ 2
ITM2C-210ENST00000620962 HSPA5P11021 654 aaKnown RBP27.56■■■□□ 2
ITM2C-210ENST00000620962 PLEKHO1Q53GL0 409 aaPredicted RBP27.55■■■□□ 2
ITM2C-210ENST00000620962 AMOTQ4VCS5 1084 aa27.54■■■□□ 2
ITM2C-210ENST00000620962 KDM6AO15550 1401 aaPredicted RBP27.53■■■□□ 2
ITM2C-210ENST00000620962 RC3H1Q5TC82 1133 aaKnown RBP27.53■■■□□ 2
ITM2C-210ENST00000620962 SLC4A9Q96Q91 983 aa27.53■■■□□ 2
ITM2C-210ENST00000620962 RTCBQ9Y3I0 505 aaKnown RBP27.53■■■□□ 2
ITM2C-210ENST00000620962 ADRA2BP18089 450 aa27.52■■■□□ 2
ITM2C-210ENST00000620962 CICQ96RK0 1608 aaPredicted RBP27.52■■■□□ 2
ITM2C-210ENST00000620962 CNTNAP4Q9C0A0 1308 aa27.51■■□□□ 1.99
ITM2C-210ENST00000620962 KIAA1551Q9HCM1 1747 aa27.51■■□□□ 1.99
ITM2C-210ENST00000620962 MMP10P09238 476 aa27.51■■□□□ 1.99
ITM2C-210ENST00000620962 TRAPPC3LQ5T215 181 aa27.51■■□□□ 1.99
ITM2C-210ENST00000620962 GPBP1L1Q9HC44 474 aaPredicted RBP27.51■■□□□ 1.99
ITM2C-210ENST00000620962 ZNF530Q6P9A1 599 aaPredicted RBP27.5■■□□□ 1.99
ITM2C-210ENST00000620962 RBM42Q9BTD8 480 aaKnown RBP27.5■■□□□ 1.99
ITM2C-210ENST00000620962 CABP4P57796 275 aa27.49■■□□□ 1.99
ITM2C-210ENST00000620962 NLGN1Q8N2Q7 840 aa27.49■■□□□ 1.99
ITM2C-210ENST00000620962 MYH14Q7Z406 1995 aaKnown RBP27.48■■□□□ 1.99
ITM2C-210ENST00000620962 MORC1Q86VD1 984 aa27.48■■□□□ 1.99
ITM2C-210ENST00000620962 PXDNLA1KZ92 1463 aa27.48■■□□□ 1.99
ITM2C-210ENST00000620962 C4AP0C0L4 1744 aa27.47■■□□□ 1.99
ITM2C-210ENST00000620962 N4BP2Q86UW6 1770 aaPredicted RBP27.46■■□□□ 1.99
ITM2C-210ENST00000620962 RPS6KA4O75676 772 aa27.46■■□□□ 1.99
ITM2C-210ENST00000620962 TGFB2P61812 414 aa27.46■■□□□ 1.99
ITM2C-210ENST00000620962 ARHGEF1Q92888 912 aaKnown RBP27.46■■□□□ 1.99
ITM2C-210ENST00000620962 WWC3Q9ULE0 1092 aa27.46■■□□□ 1.99
ITM2C-210ENST00000620962 C10orf71Q711Q0 1435 aa27.45■■□□□ 1.98
ITM2C-210ENST00000620962 MTHFSP49914 203 aa27.45■■□□□ 1.98
ITM2C-210ENST00000620962 C1orf141Q5JVX7 400 aa27.45■■□□□ 1.98
ITM2C-210ENST00000620962 AEBP1Q8IUX7 1158 aa27.45■■□□□ 1.98
ITM2C-210ENST00000620962 SCN11AQ9UI33 1791 aa27.44■■□□□ 1.98
ITM2C-210ENST00000620962 GYS1P13807 737 aa27.43■■□□□ 1.98
ITM2C-210ENST00000620962 RFC4P35249 363 aa27.43■■□□□ 1.98
ITM2C-210ENST00000620962 KNSTRNQ9Y448 316 aa27.43■■□□□ 1.98
ITM2C-210ENST00000620962 BRCA1P38398 1863 aaKnown RBP27.41■■□□□ 1.98
ITM2C-210ENST00000620962 SULT6B1Q6IMI4 303 aa27.41■■□□□ 1.98
ITM2C-210ENST00000620962 CCDC87Q9NVE4 849 aa27.41■■□□□ 1.98
ITM2C-210ENST00000620962 TJP1Q07157 1748 aa27.41■■□□□ 1.98
ITM2C-210ENST00000620962 IL13P35225 146 aa27.4■■□□□ 1.98
ITM2C-210ENST00000620962 ZNF526Q8TF50 670 aaPredicted RBP27.4■■□□□ 1.98
ITM2C-210ENST00000620962 NFATC2IPQ8NCF5 419 aa27.39■■□□□ 1.98
ITM2C-210ENST00000620962 PTCD1O75127 700 aaKnown RBP27.38■■□□□ 1.97
ITM2C-210ENST00000620962 PARP3Q9Y6F1 533 aa27.38■■□□□ 1.97
ITM2C-210ENST00000620962 CRKLP46109 303 aaKnown RBP27.37■■□□□ 1.97
ITM2C-210ENST00000620962 A0A0G2JLW4 131 aa27.36■■□□□ 1.97
ITM2C-210ENST00000620962 AMER1Q5JTC6 1135 aaPredicted RBP27.36■■□□□ 1.97
ITM2C-210ENST00000620962 BCS1LQ9Y276 419 aa27.35■■□□□ 1.97
ITM2C-210ENST00000620962 AKAP4Q5JQC9 854 aa27.34■■□□□ 1.97
ITM2C-210ENST00000620962 VIRMAQ69YN4 1812 aaKnown RBP27.34■■□□□ 1.97
ITM2C-210ENST00000620962 ARFGEF1Q9Y6D6 1849 aa27.34■■□□□ 1.97
ITM2C-210ENST00000620962 DPEP1P16444 411 aa27.33■■□□□ 1.97
ITM2C-210ENST00000620962 HSPA6P17066 643 aa27.33■■□□□ 1.97
ITM2C-210ENST00000620962 CCER1Q8TC90 406 aaPredicted RBP27.33■■□□□ 1.97
ITM2C-210ENST00000620962 USP42Q9H9J4 1324 aaKnown RBP27.33■■□□□ 1.97
ITM2C-210ENST00000620962 ADAMTS7Q9UKP4 1686 aa27.33■■□□□ 1.97
ITM2C-210ENST00000620962 KIF3CO14782 793 aa27.32■■□□□ 1.96
ITM2C-210ENST00000620962 MRC1P22897 1456 aa27.32■■□□□ 1.96
ITM2C-210ENST00000620962 CEP350Q5VT06 3117 aa27.31■■□□□ 1.96
ITM2C-210ENST00000620962 SLC52A2Q9HAB3 445 aa27.3■■□□□ 1.96
ITM2C-210ENST00000620962 FCHSD2O94868 740 aa27.29■■□□□ 1.96
ITM2C-210ENST00000620962 KCNA3P22001 575 aa27.29■■□□□ 1.96
ITM2C-210ENST00000620962 FKBP8Q14318 412 aa27.29■■□□□ 1.96
ITM2C-210ENST00000620962 INTS5Q6P9B9 1019 aaKnown RBP27.29■■□□□ 1.96
ITM2C-210ENST00000620962 SRP68Q9UHB9 627 aaKnown RBP27.29■■□□□ 1.96
ITM2C-210ENST00000620962 KIF7Q2M1P5 1343 aa27.27■■□□□ 1.96
ITM2C-210ENST00000620962 ARHGAP27Q6ZUM4 889 aa27.27■■□□□ 1.96
ITM2C-210ENST00000620962 DDR1Q08345 913 aa27.26■■□□□ 1.95
ITM2C-210ENST00000620962 LGR6Q9HBX8 967 aa27.25■■□□□ 1.95
ITM2C-210ENST00000620962 PIM2Q9P1W9 311 aa27.25■■□□□ 1.95
ITM2C-210ENST00000620962 RNMTO43148 476 aaKnown RBP27.24■■□□□ 1.95
ITM2C-210ENST00000620962 DNAJC10Q8IXB1 793 aa27.24■■□□□ 1.95
ITM2C-210ENST00000620962 SOS1Q07889 1333 aaPredicted RBP27.23■■□□□ 1.95
ITM2C-210ENST00000620962 KCPQ6ZWJ8 1503 aa27.23■■□□□ 1.95
ITM2C-210ENST00000620962 PER1O15534 1290 aaPredicted RBP27.23■■□□□ 1.95
ITM2C-210ENST00000620962 TM4SF1P30408 202 aa27.23■■□□□ 1.95
ITM2C-210ENST00000620962 POLRMTO00411 1230 aaKnown RBP27.22■■□□□ 1.95
ITM2C-210ENST00000620962 HMOX1P09601 288 aa27.22■■□□□ 1.95
ITM2C-210ENST00000620962 ZPR1O75312 459 aa27.21■■□□□ 1.95
ITM2C-210ENST00000620962 CYP19A1P11511 503 aaPredicted RBP27.21■■□□□ 1.95
ITM2C-210ENST00000620962 UBR2Q8IWV8 1755 aa27.2■■□□□ 1.95
ITM2C-210ENST00000620962 DIAPH1O60610 1272 aaKnown RBP27.2■■□□□ 1.94
ITM2C-210ENST00000620962 TOMM70O94826 608 aa27.2■■□□□ 1.94
ITM2C-210ENST00000620962 DALRD3Q5D0E6 543 aaKnown RBP27.2■■□□□ 1.94
ITM2C-210ENST00000620962 AFDNP55196 1824 aaKnown RBP27.19■■□□□ 1.94
ITM2C-210ENST00000620962 SLC39A6Q13433 755 aa27.19■■□□□ 1.94
ITM2C-210ENST00000620962 MTHFSDQ2M296 383 aaKnown RBP27.19■■□□□ 1.94
ITM2C-210ENST00000620962 VSIG10Q8N0Z9 540 aa27.19■■□□□ 1.94
ITM2C-210ENST00000620962 NRXN2Q9P2S2 1712 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms