RNA–Protein interactions for RNA: ENST00000620843.1

LPCAT3-213, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 5

Gene LPCAT3, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-213ENST00000620843 SMPD1P17405 629 aa11.26□□□□□ -0.61
LPCAT3-213ENST00000620843 WEE1P30291 646 aa11.26□□□□□ -0.61
LPCAT3-213ENST00000620843 TMCO4Q5TGY1 634 aa11.26□□□□□ -0.61
LPCAT3-213ENST00000620843 PRR20EP86478 221 aa11.25□□□□□ -0.61
LPCAT3-213ENST00000620843 PRR20CP86479 221 aa11.25□□□□□ -0.61
LPCAT3-213ENST00000620843 PRR20DP86480 221 aa11.25□□□□□ -0.61
LPCAT3-213ENST00000620843 PRR20BP86481 221 aa11.25□□□□□ -0.61
LPCAT3-213ENST00000620843 PRR20AP86496 221 aa11.25□□□□□ -0.61
LPCAT3-213ENST00000620843 C1orf216Q8TAB5 229 aa11.25□□□□□ -0.61
LPCAT3-213ENST00000620843 IL2RAP01589 272 aa11.24□□□□□ -0.61
LPCAT3-213ENST00000620843 TIMP2P16035 220 aa11.24□□□□□ -0.61
LPCAT3-213ENST00000620843 Q6ZVU0 165 aa11.24□□□□□ -0.61
LPCAT3-213ENST00000620843 KDF1Q8NAX2 398 aaPredicted RBP11.24□□□□□ -0.61
LPCAT3-213ENST00000620843 GAS2L2Q8NHY3 880 aa11.24□□□□□ -0.61
LPCAT3-213ENST00000620843 EPHA4P54764 986 aa11.23□□□□□ -0.61
LPCAT3-213ENST00000620843 TAS1R3Q7RTX0 852 aa11.23□□□□□ -0.61
LPCAT3-213ENST00000620843 AGBL1Q96MI9 1066 aa11.23□□□□□ -0.61
LPCAT3-213ENST00000620843 SLC4A9Q96Q91 983 aa11.23□□□□□ -0.61
LPCAT3-213ENST00000620843 FKBP5Q13451 457 aaPredicted RBP11.22□□□□□ -0.61
LPCAT3-213ENST00000620843 XAGE2Q96GT9 111 aa11.22□□□□□ -0.61
LPCAT3-213ENST00000620843 PURBQ96QR8 312 aaKnown RBP11.22□□□□□ -0.61
LPCAT3-213ENST00000620843 TSPAN10Q9H1Z9 355 aaPredicted RBP11.22□□□□□ -0.61
LPCAT3-213ENST00000620843 A0A1W2PRU2 124 aa11.21□□□□□ -0.61
LPCAT3-213ENST00000620843 IGFBP4P22692 258 aa11.21□□□□□ -0.61
LPCAT3-213ENST00000620843 PTGIRP43119 386 aa11.21□□□□□ -0.61
LPCAT3-213ENST00000620843 SERPINB4P48594 390 aa11.21□□□□□ -0.61
LPCAT3-213ENST00000620843 SMTNP53814 917 aa11.21□□□□□ -0.61
LPCAT3-213ENST00000620843 SCG3Q8WXD2 468 aaKnown RBP11.21□□□□□ -0.61
LPCAT3-213ENST00000620843 HPS1Q92902 700 aa11.21□□□□□ -0.61
LPCAT3-213ENST00000620843 CNKSR1Q969H4 720 aa11.21□□□□□ -0.61
LPCAT3-213ENST00000620843 MKNK1Q9BUB5 465 aa11.21□□□□□ -0.61
LPCAT3-213ENST00000620843 A6NJY4 79 aa11.2□□□□□ -0.62
LPCAT3-213ENST00000620843 RELBQ01201 579 aa11.2□□□□□ -0.62
LPCAT3-213ENST00000620843 CLN3Q13286 438 aa11.2□□□□□ -0.62
LPCAT3-213ENST00000620843 SND1Q7KZF4 910 aaKnown RBP eCLIP11.2□□□□□ -0.62
LPCAT3-213ENST00000620843 ESYT1Q9BSJ8 1104 aa11.2□□□□□ -0.62
LPCAT3-213ENST00000620843 MTMR7Q9Y216 660 aa11.2□□□□□ -0.62
LPCAT3-213ENST00000620843 TLR1Q15399 786 aa11.19□□□□□ -0.62
LPCAT3-213ENST00000620843 TBCELQ5QJ74 424 aa11.19□□□□□ -0.62
LPCAT3-213ENST00000620843 SCHIP1Q9P0W5 487 aaPredicted RBP11.19□□□□□ -0.62
LPCAT3-213ENST00000620843 ATAD2Q6PL18 1390 aa11.18□□□□□ -0.62
LPCAT3-213ENST00000620843 MEN1O00255 615 aa11.18□□□□□ -0.62
LPCAT3-213ENST00000620843 C21orf2O43822 256 aa11.18□□□□□ -0.62
LPCAT3-213ENST00000620843 FOXK2Q01167 660 aa11.18□□□□□ -0.62
LPCAT3-213ENST00000620843 MTFR1Q15390 333 aa11.18□□□□□ -0.62
LPCAT3-213ENST00000620843 SLC9A9Q8IVB4 645 aa11.18□□□□□ -0.62
LPCAT3-213ENST00000620843 CHMP7Q8WUX9 453 aaPredicted RBP11.18□□□□□ -0.62
LPCAT3-213ENST00000620843 ZNF395Q9H8N7 513 aaPredicted RBP11.18□□□□□ -0.62
LPCAT3-213ENST00000620843 HRH3Q9Y5N1 445 aa11.18□□□□□ -0.62
LPCAT3-213ENST00000620843 FOXO3O43524 673 aa11.17□□□□□ -0.62
LPCAT3-213ENST00000620843 MFAP1P55081 439 aaKnown RBP11.17□□□□□ -0.62
LPCAT3-213ENST00000620843 CAPN12Q6ZSI9 719 aa11.17□□□□□ -0.62
LPCAT3-213ENST00000620843 MEIOBQ8N635 442 aa11.17□□□□□ -0.62
LPCAT3-213ENST00000620843 SEPT3Q9UH03 358 aa11.17□□□□□ -0.62
LPCAT3-213ENST00000620843 PPP1R12BO60237 982 aaPredicted RBP11.16□□□□□ -0.62
LPCAT3-213ENST00000620843 NLRP3Q96P20 1036 aa11.16□□□□□ -0.62
LPCAT3-213ENST00000620843 PDZRN3Q9UPQ7 1066 aa11.16□□□□□ -0.62
LPCAT3-213ENST00000620843 USP3Q9Y6I4 520 aa11.16□□□□□ -0.62
LPCAT3-213ENST00000620843 ABL1P00519 1130 aa11.15□□□□□ -0.62
LPCAT3-213ENST00000620843 CENPCQ03188 943 aa11.15□□□□□ -0.62
LPCAT3-213ENST00000620843 SOWAHDA6NJG2 315 aa11.14□□□□□ -0.63
LPCAT3-213ENST00000620843 CDK2AP1O14519 115 aa11.14□□□□□ -0.63
LPCAT3-213ENST00000620843 CAPN5O15484 640 aaPredicted RBP11.14□□□□□ -0.63
LPCAT3-213ENST00000620843 PTCD1O75127 700 aaKnown RBP11.14□□□□□ -0.63
LPCAT3-213ENST00000620843 RGS20O76081 388 aa11.14□□□□□ -0.63
LPCAT3-213ENST00000620843 VTI1AQ96AJ9 217 aa11.14□□□□□ -0.63
LPCAT3-213ENST00000620843 FHDC1Q9C0D6 1143 aaPredicted RBP11.14□□□□□ -0.63
LPCAT3-213ENST00000620843 ZNF211Q13398 564 aaPredicted RBP11.13□□□□□ -0.63
LPCAT3-213ENST00000620843 GTF3C2Q8WUA4 911 aaPredicted RBP11.13□□□□□ -0.63
LPCAT3-213ENST00000620843 ANO2Q9NQ90 1003 aa11.13□□□□□ -0.63
LPCAT3-213ENST00000620843 IQSEC3Q9UPP2 1182 aaPredicted RBP11.13□□□□□ -0.63
LPCAT3-213ENST00000620843 PSMA6P60900 246 aaKnown RBP11.12□□□□□ -0.63
LPCAT3-213ENST00000620843 NAA30Q147X3 362 aaPredicted RBP11.12□□□□□ -0.63
LPCAT3-213ENST00000620843 CCDC27Q2M243 656 aa11.12□□□□□ -0.63
LPCAT3-213ENST00000620843 NBPF15Q8N660 670 aa11.12□□□□□ -0.63
LPCAT3-213ENST00000620843 COL26A1Q96A83 441 aa11.12□□□□□ -0.63
LPCAT3-213ENST00000620843 TSEN34Q9BSV6 310 aaKnown RBP11.11□□□□□ -0.63
LPCAT3-213ENST00000620843 C2orf49Q9BVC5 232 aaPredicted RBP11.11□□□□□ -0.63
LPCAT3-213ENST00000620843 EGFL7Q9UHF1 273 aa11.11□□□□□ -0.63
LPCAT3-213ENST00000620843 FAM187AA6NFU0 413 aa11.1□□□□□ -0.63
LPCAT3-213ENST00000620843 LINC00528Q8N1L1 170 aa11.1□□□□□ -0.63
LPCAT3-213ENST00000620843 STAG2Q8N3U4 1231 aa11.1□□□□□ -0.63
LPCAT3-213ENST00000620843 ZSCAN10Q96SZ4 725 aaPredicted RBP11.1□□□□□ -0.63
LPCAT3-213ENST00000620843 INSM2Q96T92 566 aaPredicted RBP11.1□□□□□ -0.63
LPCAT3-213ENST00000620843 DNMT3AQ9Y6K1 912 aaPredicted RBP11.1□□□□□ -0.63
LPCAT3-213ENST00000620843 H3BRB1 525 aa11.09□□□□□ -0.63
LPCAT3-213ENST00000620843 TUT1Q9H6E5 874 aaKnown RBP11.09□□□□□ -0.63
LPCAT3-213ENST00000620843 CHMP3Q9Y3E7 222 aa11.09□□□□□ -0.63
LPCAT3-213ENST00000620843 SPINT1O43278 529 aa11.08□□□□□ -0.64
LPCAT3-213ENST00000620843 UPP2O95045 317 aa11.08□□□□□ -0.64
LPCAT3-213ENST00000620843 MTMR3Q13615 1198 aa11.08□□□□□ -0.64
LPCAT3-213ENST00000620843 TMEM214Q6NUQ4 689 aaKnown RBP11.08□□□□□ -0.64
LPCAT3-213ENST00000620843 PPARGC1BQ86YN6 1023 aaKnown RBP11.08□□□□□ -0.64
LPCAT3-213ENST00000620843 CABP1Q9NZU7 370 aa11.08□□□□□ -0.64
LPCAT3-213ENST00000620843 BIN2Q9UBW5 565 aaPredicted RBP11.08□□□□□ -0.64
LPCAT3-213ENST00000620843 SERTM1A2A2V5 107 aa11.07□□□□□ -0.64
LPCAT3-213ENST00000620843 ICMTO60725 284 aa11.07□□□□□ -0.64
LPCAT3-213ENST00000620843 SLC27A3Q5K4L6 730 aa11.07□□□□□ -0.64
LPCAT3-213ENST00000620843 SH3PXD2AQ5TCZ1 1133 aa11.07□□□□□ -0.64
LPCAT3-213ENST00000620843 GLYCTKQ8IVS8 523 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms