RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-223ENST00000620632 SLC52A2Q9HAB3 445 aa14.35□□□□□ -0.11
TARDBP-223ENST00000620632 ZNF831Q5JPB2 1677 aa14.35□□□□□ -0.11
TARDBP-223ENST00000620632 COL5A3P25940 1745 aaPredicted RBP14.35□□□□□ -0.11
TARDBP-223ENST00000620632 TJP1Q07157 1748 aa14.35□□□□□ -0.11
TARDBP-223ENST00000620632 CEMIPQ8WUJ3 1361 aa14.34□□□□□ -0.11
TARDBP-223ENST00000620632 PSDA5PKW4 1024 aaPredicted RBP14.34□□□□□ -0.11
TARDBP-223ENST00000620632 DCTN1Q14203 1278 aa14.34□□□□□ -0.11
TARDBP-223ENST00000620632 WDR43Q15061 677 aaKnown RBP eCLIP14.34□□□□□ -0.11
TARDBP-223ENST00000620632 CASZ1Q86V15 1759 aa14.34□□□□□ -0.11
TARDBP-223ENST00000620632 C4BP0C0L5 1744 aa14.33□□□□□ -0.12
TARDBP-223ENST00000620632 QSER1Q2KHR3 1735 aa14.33□□□□□ -0.12
TARDBP-223ENST00000620632 KCPQ6ZWJ8 1503 aa14.33□□□□□ -0.12
TARDBP-223ENST00000620632 MCM10Q7L590 875 aa14.33□□□□□ -0.12
TARDBP-223ENST00000620632 SLC4A9Q96Q91 983 aa14.33□□□□□ -0.12
TARDBP-223ENST00000620632 MRS2Q9HD23 443 aa14.33□□□□□ -0.12
TARDBP-223ENST00000620632 CICQ96RK0 1608 aaPredicted RBP14.33□□□□□ -0.12
TARDBP-223ENST00000620632 R3HDM1Q15032 1099 aaKnown RBP14.32□□□□□ -0.12
TARDBP-223ENST00000620632 NFE2L2Q16236 605 aa14.32□□□□□ -0.12
TARDBP-223ENST00000620632 ZNF827Q17R98 1081 aa14.32□□□□□ -0.12
TARDBP-223ENST00000620632 SLC27A3Q5K4L6 730 aa14.32□□□□□ -0.12
TARDBP-223ENST00000620632 PNISRQ8TF01 805 aaKnown RBP14.32□□□□□ -0.12
TARDBP-223ENST00000620632 CCNL1Q9UK58 526 aaPredicted RBP14.32□□□□□ -0.12
TARDBP-223ENST00000620632 MYH14Q7Z406 1995 aaKnown RBP14.32□□□□□ -0.12
TARDBP-223ENST00000620632 MAPK8IP3Q9UPT6 1336 aa14.32□□□□□ -0.12
TARDBP-223ENST00000620632 UBR3Q6ZT12 1888 aa14.31□□□□□ -0.12
TARDBP-223ENST00000620632 LOC102724428A0A0B4J2F2 783 aa14.31□□□□□ -0.12
TARDBP-223ENST00000620632 SIK1P57059 783 aa14.31□□□□□ -0.12
TARDBP-223ENST00000620632 SLC39A6Q13433 755 aa14.31□□□□□ -0.12
TARDBP-223ENST00000620632 SMARCC1Q92922 1105 aaPredicted RBP14.31□□□□□ -0.12
TARDBP-223ENST00000620632 KDM3BQ7LBC6 1761 aa14.31□□□□□ -0.12
TARDBP-223ENST00000620632 TMPOP42166 694 aaKnown RBP14.3□□□□□ -0.12
TARDBP-223ENST00000620632 ITPK1Q13572 414 aa14.3□□□□□ -0.12
TARDBP-223ENST00000620632 RUNDC1Q96C34 613 aa14.3□□□□□ -0.12
TARDBP-223ENST00000620632 THUMPD2Q9BTF0 503 aaKnown RBP14.3□□□□□ -0.12
TARDBP-223ENST00000620632 PNNQ9H307 717 aaKnown RBP14.3□□□□□ -0.12
TARDBP-223ENST00000620632 RRP7AQ9Y3A4 280 aaKnown RBP14.3□□□□□ -0.12
TARDBP-223ENST00000620632 NEFMP07197 916 aa14.29□□□□□ -0.12
TARDBP-223ENST00000620632 AKT1S1Q96B36 256 aa14.29□□□□□ -0.12
TARDBP-223ENST00000620632 PDGFDQ9GZP0 370 aaPredicted RBP14.29□□□□□ -0.12
TARDBP-223ENST00000620632 HTATSF1O43719 755 aaKnown RBP14.28□□□□□ -0.12
TARDBP-223ENST00000620632 SLC15A2Q16348 729 aa14.28□□□□□ -0.12
TARDBP-223ENST00000620632 NBPF14Q5TI25 921 aa14.28□□□□□ -0.12
TARDBP-223ENST00000620632 LINC00116Q8NCU8 138 aa14.28□□□□□ -0.12
TARDBP-223ENST00000620632 SRCAPQ6ZRS2 3230 aa14.28□□□□□ -0.12
TARDBP-223ENST00000620632 KCNQ3O43525 872 aa14.27□□□□□ -0.13
TARDBP-223ENST00000620632 PTCD1O75127 700 aaKnown RBP14.27□□□□□ -0.13
TARDBP-223ENST00000620632 ATP6V1AP38606 617 aa14.27□□□□□ -0.13
TARDBP-223ENST00000620632 RIPK4P57078 832 aa14.27□□□□□ -0.13
TARDBP-223ENST00000620632 TEFQ10587 303 aa14.27□□□□□ -0.13
TARDBP-223ENST00000620632 AMIGO3Q86WK7 504 aa14.27□□□□□ -0.13
TARDBP-223ENST00000620632 RTF1Q92541 710 aaKnown RBP14.27□□□□□ -0.13
TARDBP-223ENST00000620632 RBM42Q9BTD8 480 aaKnown RBP14.27□□□□□ -0.13
TARDBP-223ENST00000620632 SENP3-EIF4A1A0A087X0R7 540 aa14.26□□□□□ -0.13
TARDBP-223ENST00000620632 NEUROD2Q15784 382 aa14.26□□□□□ -0.13
TARDBP-223ENST00000620632 DIEXFQ68CQ4 756 aaKnown RBP14.26□□□□□ -0.13
TARDBP-223ENST00000620632 STK32BQ9NY57 414 aa14.26□□□□□ -0.13
TARDBP-223ENST00000620632 TRIM35Q9UPQ4 493 aa14.26□□□□□ -0.13
TARDBP-223ENST00000620632 APAF1O14727 1248 aa14.25□□□□□ -0.13
TARDBP-223ENST00000620632 SMIM5Q71RC9 77 aa14.25□□□□□ -0.13
TARDBP-223ENST00000620632 PNPLA7Q6ZV29 1317 aa14.24□□□□□ -0.13
TARDBP-223ENST00000620632 BTBD11A6QL63 1104 aa14.24□□□□□ -0.13
TARDBP-223ENST00000620632 ZNF790Q6PG37 636 aa14.24□□□□□ -0.13
TARDBP-223ENST00000620632 ZNF496Q96IT1 587 aaPredicted RBP14.24□□□□□ -0.13
TARDBP-223ENST00000620632 MIS18AQ9NYP9 233 aa14.24□□□□□ -0.13
TARDBP-223ENST00000620632 C4AP0C0L4 1744 aa14.24□□□□□ -0.13
TARDBP-223ENST00000620632 COL24A1Q17RW2 1714 aa14.23□□□□□ -0.13
TARDBP-223ENST00000620632 LRP5O75197 1615 aa14.23□□□□□ -0.13
TARDBP-223ENST00000620632 LAMB4A4D0S4 1761 aa14.22□□□□□ -0.13
TARDBP-223ENST00000620632 DNAJC10Q8IXB1 793 aa14.22□□□□□ -0.13
TARDBP-223ENST00000620632 FAM9BQ8IZU0 186 aa14.22□□□□□ -0.13
TARDBP-223ENST00000620632 MIER1Q8N108 512 aa14.22□□□□□ -0.13
TARDBP-223ENST00000620632 HEG1Q9ULI3 1381 aa14.22□□□□□ -0.13
TARDBP-223ENST00000620632 PRAMEF22A3QJZ6 481 aa14.21□□□□□ -0.13
TARDBP-223ENST00000620632 TAF7Q15545 349 aaPredicted RBP14.21□□□□□ -0.13
TARDBP-223ENST00000620632 TTC5Q8N0Z6 440 aa14.21□□□□□ -0.13
TARDBP-223ENST00000620632 TFCP2L1Q9NZI6 479 aa14.21□□□□□ -0.13
TARDBP-223ENST00000620632 CNTNAP4Q9C0A0 1308 aa14.2□□□□□ -0.14
TARDBP-223ENST00000620632 LMOD3Q0VAK6 560 aa14.2□□□□□ -0.14
TARDBP-223ENST00000620632 COL23A1Q86Y22 540 aaPredicted RBP14.2□□□□□ -0.14
TARDBP-223ENST00000620632 CCER2I3L3R5 266 aa14.19□□□□□ -0.14
TARDBP-223ENST00000620632 CYP19A1P11511 503 aaPredicted RBP14.19□□□□□ -0.14
TARDBP-223ENST00000620632 CRKLP46109 303 aaKnown RBP14.19□□□□□ -0.14
TARDBP-223ENST00000620632 VSIG10Q8N0Z9 540 aa14.19□□□□□ -0.14
TARDBP-223ENST00000620632 AK7Q96M32 723 aa14.19□□□□□ -0.14
TARDBP-223ENST00000620632 GNPATO15228 680 aa14.18□□□□□ -0.14
TARDBP-223ENST00000620632 PHF14O94880 888 aa14.18□□□□□ -0.14
TARDBP-223ENST00000620632 ZBTB7AO95365 584 aa14.18□□□□□ -0.14
TARDBP-223ENST00000620632 INTS5Q6P9B9 1019 aaKnown RBP14.18□□□□□ -0.14
TARDBP-223ENST00000620632 FMNL2Q96PY5 1086 aa14.18□□□□□ -0.14
TARDBP-223ENST00000620632 RC3H1Q5TC82 1133 aaKnown RBP14.17□□□□□ -0.14
TARDBP-223ENST00000620632 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.16□□□□□ -0.14
TARDBP-223ENST00000620632 EIF4A1P60842 406 aaKnown RBP14.16□□□□□ -0.14
TARDBP-223ENST00000620632 TSPYL4Q9UJ04 414 aa14.16□□□□□ -0.14
TARDBP-223ENST00000620632 ZBTB1Q9Y2K1 713 aa14.16□□□□□ -0.14
TARDBP-223ENST00000620632 CHL1O00533 1208 aa14.15□□□□□ -0.14
TARDBP-223ENST00000620632 RPS6KA4O75676 772 aa14.15□□□□□ -0.14
TARDBP-223ENST00000620632 SSFA2P28290 1259 aa14.15□□□□□ -0.14
TARDBP-223ENST00000620632 CCDC87Q9NVE4 849 aa14.15□□□□□ -0.14
TARDBP-223ENST00000620632 ATF5Q9Y2D1 282 aaPredicted RBP14.15□□□□□ -0.14
TARDBP-223ENST00000620632 USP16Q9Y5T5 823 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms