RNA–Protein interactions for RNA: ENST00000620232.1

SNORD3A-202, Transcript of small nucleolar RNA, C/D box 3A, humanhuman

Gene SNORD3A, Length 218 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3A-202ENST00000620232 SLC52A2Q9HAB3 445 aa14.31□□□□□ -0.12
SNORD3A-202ENST00000620232 LAS1LQ9Y4W2 734 aaKnown RBP14.31□□□□□ -0.12
SNORD3A-202ENST00000620232 BCL9O00512 1426 aa14.31□□□□□ -0.12
SNORD3A-202ENST00000620232 KDM6AO15550 1401 aaPredicted RBP14.31□□□□□ -0.12
SNORD3A-202ENST00000620232 ZNF831Q5JPB2 1677 aa14.3□□□□□ -0.12
SNORD3A-202ENST00000620232 SLFN5Q08AF3 891 aa14.3□□□□□ -0.12
SNORD3A-202ENST00000620232 DCTN1Q14203 1278 aa14.3□□□□□ -0.12
SNORD3A-202ENST00000620232 TMOD3Q9NYL9 352 aa14.3□□□□□ -0.12
SNORD3A-202ENST00000620232 SOS1Q07889 1333 aaPredicted RBP14.3□□□□□ -0.12
SNORD3A-202ENST00000620232 SENP3-EIF4A1A0A087X0R7 540 aa14.29□□□□□ -0.12
SNORD3A-202ENST00000620232 BTBD11A6QL63 1104 aa14.29□□□□□ -0.12
SNORD3A-202ENST00000620232 CT47B1P0C2W7 299 aaPredicted RBP14.29□□□□□ -0.12
SNORD3A-202ENST00000620232 HMGB2P26583 209 aaKnown RBP14.29□□□□□ -0.12
SNORD3A-202ENST00000620232 KRT27Q7Z3Y8 459 aa14.29□□□□□ -0.12
SNORD3A-202ENST00000620232 TTC5Q8N0Z6 440 aa14.29□□□□□ -0.12
SNORD3A-202ENST00000620232 TSPYL4Q9UJ04 414 aa14.29□□□□□ -0.12
SNORD3A-202ENST00000620232 FAM196AQ6ZSG2 479 aa14.28□□□□□ -0.12
SNORD3A-202ENST00000620232 LGR6Q9HBX8 967 aa14.28□□□□□ -0.12
SNORD3A-202ENST00000620232 RGPD3A6NKT7 1758 aaPredicted RBP14.27□□□□□ -0.12
SNORD3A-202ENST00000620232 RGPD4Q7Z3J3 1758 aa14.27□□□□□ -0.12
SNORD3A-202ENST00000620232 LY75O60449 1722 aa14.27□□□□□ -0.12
SNORD3A-202ENST00000620232 CHL1O00533 1208 aa14.27□□□□□ -0.13
SNORD3A-202ENST00000620232 MARCH10Q8NA82 808 aaPredicted RBP14.27□□□□□ -0.13
SNORD3A-202ENST00000620232 ZNF428Q96B54 188 aa14.27□□□□□ -0.13
SNORD3A-202ENST00000620232 THUMPD2Q9BTF0 503 aaKnown RBP14.27□□□□□ -0.13
SNORD3A-202ENST00000620232 ZNF853P0CG23 659 aa14.26□□□□□ -0.13
SNORD3A-202ENST00000620232 NFATC2IPQ8NCF5 419 aa14.26□□□□□ -0.13
SNORD3A-202ENST00000620232 SYTL4Q96C24 671 aaPredicted RBP14.26□□□□□ -0.13
SNORD3A-202ENST00000620232 CICQ96RK0 1608 aaPredicted RBP14.26□□□□□ -0.13
SNORD3A-202ENST00000620232 RGS12O14924 1447 aa14.25□□□□□ -0.13
SNORD3A-202ENST00000620232 TAF1LQ8IZX4 1826 aa14.25□□□□□ -0.13
SNORD3A-202ENST00000620232 FANCIQ9NVI1 1328 aa14.25□□□□□ -0.13
SNORD3A-202ENST00000620232 TRMT2AQ8IZ69 625 aaKnown RBP14.25□□□□□ -0.13
SNORD3A-202ENST00000620232 SMARCC1Q92922 1105 aaPredicted RBP14.25□□□□□ -0.13
SNORD3A-202ENST00000620232 MBIPQ9NS73 344 aa14.25□□□□□ -0.13
SNORD3A-202ENST00000620232 RGS17Q9UGC6 210 aaPredicted RBP14.25□□□□□ -0.13
SNORD3A-202ENST00000620232 C5P01031 1676 aa14.24□□□□□ -0.13
SNORD3A-202ENST00000620232 DUSP27Q5VZP5 1158 aa14.24□□□□□ -0.13
SNORD3A-202ENST00000620232 POTEAQ6S8J7 498 aa14.24□□□□□ -0.13
SNORD3A-202ENST00000620232 CDCA7LQ96GN5 454 aa14.24□□□□□ -0.13
SNORD3A-202ENST00000620232 HOXB7P09629 217 aa14.23□□□□□ -0.13
SNORD3A-202ENST00000620232 ZNF790Q6PG37 636 aa14.23□□□□□ -0.13
SNORD3A-202ENST00000620232 FMNL2Q96PY5 1086 aa14.23□□□□□ -0.13
SNORD3A-202ENST00000620232 TNS1Q9HBL0 1735 aaKnown RBP14.23□□□□□ -0.13
SNORD3A-202ENST00000620232 PRIM1P49642 420 aaKnown RBP14.22□□□□□ -0.13
SNORD3A-202ENST00000620232 TSR2Q969E8 191 aaKnown RBP14.22□□□□□ -0.13
SNORD3A-202ENST00000620232 COL5A3P25940 1745 aaPredicted RBP14.21□□□□□ -0.13
SNORD3A-202ENST00000620232 TEX13AQ9BXU3 409 aaPredicted RBP14.21□□□□□ -0.13
SNORD3A-202ENST00000620232 EXOSC9Q06265 439 aaKnown RBP14.2□□□□□ -0.14
SNORD3A-202ENST00000620232 TWISTNBQ3B726 338 aaPredicted RBP14.2□□□□□ -0.14
SNORD3A-202ENST00000620232 ACSBG1Q96GR2 724 aa14.2□□□□□ -0.14
SNORD3A-202ENST00000620232 TJP1Q07157 1748 aa14.2□□□□□ -0.14
SNORD3A-202ENST00000620232 EIF4A1P60842 406 aaKnown RBP14.19□□□□□ -0.14
SNORD3A-202ENST00000620232 VSIG10Q8N0Z9 540 aa14.19□□□□□ -0.14
SNORD3A-202ENST00000620232 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.19□□□□□ -0.14
SNORD3A-202ENST00000620232 PIGBQ92521 554 aa14.19□□□□□ -0.14
SNORD3A-202ENST00000620232 BCL11BQ9C0K0 894 aaPredicted RBP14.19□□□□□ -0.14
SNORD3A-202ENST00000620232 SPINK5Q9NQ38 1064 aaPredicted RBP14.19□□□□□ -0.14
SNORD3A-202ENST00000620232 KCPQ6ZWJ8 1503 aa14.19□□□□□ -0.14
SNORD3A-202ENST00000620232 SNRPA1P09661 255 aaKnown RBP14.18□□□□□ -0.14
SNORD3A-202ENST00000620232 ALDH1L2Q3SY69 923 aa14.18□□□□□ -0.14
SNORD3A-202ENST00000620232 CCDC30Q5VVM6 783 aa14.18□□□□□ -0.14
SNORD3A-202ENST00000620232 STK31Q9BXU1 1019 aa14.18□□□□□ -0.14
SNORD3A-202ENST00000620232 MIS18AQ9NYP9 233 aa14.18□□□□□ -0.14
SNORD3A-202ENST00000620232 HEG1Q9ULI3 1381 aa14.18□□□□□ -0.14
SNORD3A-202ENST00000620232 RCAN3Q9UKA8 241 aa14.17□□□□□ -0.14
SNORD3A-202ENST00000620232 SLC39A6Q13433 755 aa14.16□□□□□ -0.14
SNORD3A-202ENST00000620232 SF3B2Q13435 895 aaKnown RBP14.16□□□□□ -0.14
SNORD3A-202ENST00000620232 PALLDQ8WX93 1383 aa14.16□□□□□ -0.14
SNORD3A-202ENST00000620232 N4BP2Q86UW6 1770 aaPredicted RBP14.16□□□□□ -0.14
SNORD3A-202ENST00000620232 GIGYF1O75420 1035 aaPredicted RBP14.15□□□□□ -0.14
SNORD3A-202ENST00000620232 STARD3NLO95772 234 aa14.15□□□□□ -0.14
SNORD3A-202ENST00000620232 RBM42Q9BTD8 480 aaKnown RBP14.15□□□□□ -0.14
SNORD3A-202ENST00000620232 ATG3Q9NT62 314 aa14.15□□□□□ -0.14
SNORD3A-202ENST00000620232 ERBB4Q15303 1308 aa14.15□□□□□ -0.15
SNORD3A-202ENST00000620232 KIF16BQ96L93 1317 aa14.15□□□□□ -0.15
SNORD3A-202ENST00000620232 RREB1Q92766 1687 aa14.14□□□□□ -0.15
SNORD3A-202ENST00000620232 PTCD1O75127 700 aaKnown RBP14.14□□□□□ -0.15
SNORD3A-202ENST00000620232 MS4A1P11836 297 aa14.14□□□□□ -0.15
SNORD3A-202ENST00000620232 FAM182BQ5T319 152 aa14.14□□□□□ -0.15
SNORD3A-202ENST00000620232 HDGFL1Q5TGJ6 251 aa14.14□□□□□ -0.15
SNORD3A-202ENST00000620232 NPM2Q86SE8 214 aaKnown RBP14.14□□□□□ -0.15
SNORD3A-202ENST00000620232 CCDC125Q86Z20 511 aa14.14□□□□□ -0.15
SNORD3A-202ENST00000620232 PIAS4Q8N2W9 510 aaPredicted RBP14.14□□□□□ -0.15
SNORD3A-202ENST00000620232 C8orf58Q8NAV2 365 aa14.14□□□□□ -0.15
SNORD3A-202ENST00000620232 ZNF496Q96IT1 587 aaPredicted RBP14.14□□□□□ -0.15
SNORD3A-202ENST00000620232 ASAP1Q9ULH1 1129 aa14.14□□□□□ -0.15
SNORD3A-202ENST00000620232 AFDNP55196 1824 aaKnown RBP14.13□□□□□ -0.15
SNORD3A-202ENST00000620232 ELL2O00472 640 aaPredicted RBP14.13□□□□□ -0.15
SNORD3A-202ENST00000620232 IPO8O15397 1037 aaKnown RBP14.13□□□□□ -0.15
SNORD3A-202ENST00000620232 KCNQ2O43526 872 aa14.13□□□□□ -0.15
SNORD3A-202ENST00000620232 VAMP4O75379 141 aa14.13□□□□□ -0.15
SNORD3A-202ENST00000620232 TRIM37O94972 964 aa14.13□□□□□ -0.15
SNORD3A-202ENST00000620232 CANXP27824 592 aaKnown RBP14.13□□□□□ -0.15
SNORD3A-202ENST00000620232 SMC4Q9NTJ3 1288 aa14.13□□□□□ -0.15
SNORD3A-202ENST00000620232 DBF4Q9UBU7 674 aaPredicted RBP14.13□□□□□ -0.15
SNORD3A-202ENST00000620232 MYH14Q7Z406 1995 aaKnown RBP14.12□□□□□ -0.15
SNORD3A-202ENST00000620232 ANKRD36CQ5JPF3 1778 aa14.11□□□□□ -0.15
SNORD3A-202ENST00000620232 NUP98P52948 1817 aa14.11□□□□□ -0.15
SNORD3A-202ENST00000620232 LOC102724428A0A0B4J2F2 783 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms