RNA–Protein interactions for RNA: ENST00000620040.4

DMD-230, Transcript of dystrophin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DMD, Length 13,746 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-230ENST00000620040 WDR7Q9Y4E6 1490 aa4.89□□□□□ -1.63
DMD-230ENST00000620040 NKTRP30414 1462 aaKnown RBP4.89□□□□□ -1.63
DMD-230ENST00000620040 BCCIPQ9P287 314 aaKnown RBP eCLIP4.89□□□□□ -1.63
DMD-230ENST00000620040 LUC7L2Q9Y383 392 aaKnown RBP4.89□□□□□ -1.63
DMD-230ENST00000620040 NUP160Q12769 1436 aa4.88□□□□□ -1.63
DMD-230ENST00000620040 IFT140Q96RY7 1462 aa4.88□□□□□ -1.63
DMD-230ENST00000620040 DMTNQ08495 405 aa4.88□□□□□ -1.63
DMD-230ENST00000620040 FSD2A1L4K1 749 aa4.88□□□□□ -1.63
DMD-230ENST00000620040 HSF2BPO75031 334 aa4.88□□□□□ -1.63
DMD-230ENST00000620040 BRPF1P55201 1214 aaPredicted RBP4.88□□□□□ -1.63
DMD-230ENST00000620040 ZBTB17Q13105 803 aa4.88□□□□□ -1.63
DMD-230ENST00000620040 SNW1Q13573 536 aaKnown RBP4.88□□□□□ -1.63
DMD-230ENST00000620040 FAM177A1Q8N128 213 aaPredicted RBP4.88□□□□□ -1.63
DMD-230ENST00000620040 NAP1L3Q99457 506 aaPredicted RBP4.88□□□□□ -1.63
DMD-230ENST00000620040 LNPKQ9C0E8 428 aa4.88□□□□□ -1.63
DMD-230ENST00000620040 VGLL3A8MV65 326 aa4.88□□□□□ -1.63
DMD-230ENST00000620040 PAFAH1B1P43034 410 aa4.88□□□□□ -1.63
DMD-230ENST00000620040 CCDC27Q2M243 656 aa4.88□□□□□ -1.63
DMD-230ENST00000620040 GAPVD1Q14C86 1478 aa4.88□□□□□ -1.63
DMD-230ENST00000620040 B4GALNT4Q76KP1 1039 aa4.88□□□□□ -1.63
DMD-230ENST00000620040 SRCIN1Q9C0H9 1055 aa4.88□□□□□ -1.63
DMD-230ENST00000620040 NAIPQ13075 1403 aa4.88□□□□□ -1.63
DMD-230ENST00000620040 CEP135Q66GS9 1140 aa4.88□□□□□ -1.63
DMD-230ENST00000620040 CCDC121Q6ZUS5 278 aa4.88□□□□□ -1.63
DMD-230ENST00000620040 XPCQ01831 940 aaPredicted RBP4.88□□□□□ -1.63
DMD-230ENST00000620040 LMOD2Q6P5Q4 547 aa4.88□□□□□ -1.63
DMD-230ENST00000620040 ATAD2Q6PL18 1390 aa4.88□□□□□ -1.63
DMD-230ENST00000620040 NBPF11Q86T75 865 aa4.88□□□□□ -1.63
DMD-230ENST00000620040 CTCFLQ8NI51 663 aaPredicted RBP4.88□□□□□ -1.63
DMD-230ENST00000620040 BRD2P25440 801 aaKnown RBP4.88□□□□□ -1.63
DMD-230ENST00000620040 AIMP1Q12904 312 aaKnown RBP4.88□□□□□ -1.63
DMD-230ENST00000620040 CAMSAP2Q08AD1 1489 aa4.88□□□□□ -1.63
DMD-230ENST00000620040 USO1O60763 962 aaKnown RBP4.88□□□□□ -1.63
DMD-230ENST00000620040 CCDC38Q502W7 563 aa4.88□□□□□ -1.63
DMD-230ENST00000620040 FANCD2Q9BXW9 1451 aa4.88□□□□□ -1.63
DMD-230ENST00000620040 PPP1R12BO60237 982 aaPredicted RBP4.88□□□□□ -1.63
DMD-230ENST00000620040 TACC1O75410 805 aa4.88□□□□□ -1.63
DMD-230ENST00000620040 GNAI3P08754 354 aa4.88□□□□□ -1.63
DMD-230ENST00000620040 CCDC6Q16204 474 aa4.88□□□□□ -1.63
DMD-230ENST00000620040 CFAP100Q494V2 611 aa4.88□□□□□ -1.63
DMD-230ENST00000620040 NUP133Q8WUM0 1156 aa4.88□□□□□ -1.63
DMD-230ENST00000620040 C16orf45Q96MC5 204 aaPredicted RBP4.88□□□□□ -1.63
DMD-230ENST00000620040 TRERF1Q96PN7 1200 aa4.87□□□□□ -1.63
DMD-230ENST00000620040 KLHL40Q2TBA0 621 aa4.87□□□□□ -1.63
DMD-230ENST00000620040 TRIM22Q8IYM9 498 aa4.87□□□□□ -1.63
DMD-230ENST00000620040 MICALL1Q8N3F8 863 aa4.87□□□□□ -1.63
DMD-230ENST00000620040 DDX19AQ9NUU7 478 aaKnown RBP4.87□□□□□ -1.63
DMD-230ENST00000620040 URI1O94763 535 aaPredicted RBP4.87□□□□□ -1.63
DMD-230ENST00000620040 CAPN2P17655 700 aa4.87□□□□□ -1.63
DMD-230ENST00000620040 TOP1P11387 765 aaKnown RBP4.87□□□□□ -1.63
DMD-230ENST00000620040 KRT32Q14532 448 aa4.87□□□□□ -1.63
DMD-230ENST00000620040 E9PCH4 1651 aa4.87□□□□□ -1.63
DMD-230ENST00000620040 KIF4BQ2VIQ3 1234 aa4.87□□□□□ -1.63
DMD-230ENST00000620040 CEP131Q9UPN4 1083 aa4.87□□□□□ -1.63
DMD-230ENST00000620040 SREK1Q8WXA9 508 aaKnown RBP4.87□□□□□ -1.63
DMD-230ENST00000620040 WASF1Q92558 559 aa4.87□□□□□ -1.63
DMD-230ENST00000620040 ZNF622Q969S3 477 aaKnown RBP eCLIP4.87□□□□□ -1.632e-6■■■□□ 17.4
DMD-230ENST00000620040 RSPH14Q9UHP6 348 aa4.87□□□□□ -1.63
DMD-230ENST00000620040 HOOK3Q86VS8 718 aa4.87□□□□□ -1.63
DMD-230ENST00000620040 DDX23Q9BUQ8 820 aaKnown RBP4.87□□□□□ -1.63
DMD-230ENST00000620040 NAA25Q14CX7 972 aa4.87□□□□□ -1.63
DMD-230ENST00000620040 LMNTD2Q8IXW0 634 aa4.87□□□□□ -1.63
DMD-230ENST00000620040 SHANK2Q9UPX8 1470 aa4.87□□□□□ -1.63
DMD-230ENST00000620040 NUTM1Q86Y26 1132 aa4.87□□□□□ -1.63
DMD-230ENST00000620040 IFT74Q96LB3 600 aa4.87□□□□□ -1.63
DMD-230ENST00000620040 NOL7Q9UMY1 257 aaKnown RBP4.87□□□□□ -1.63
DMD-230ENST00000620040 LARP1BQ659C4 914 aaKnown RBP4.87□□□□□ -1.63
DMD-230ENST00000620040 OTUD6BQ8N6M0 293 aa4.87□□□□□ -1.63
DMD-230ENST00000620040 POTEJP0CG39 1038 aa4.86□□□□□ -1.63
DMD-230ENST00000620040 KDM5CP41229 1560 aa4.86□□□□□ -1.63
DMD-230ENST00000620040 IQGAP2Q13576 1575 aa4.86□□□□□ -1.63
DMD-230ENST00000620040 UHRF1BP1Q6BDS2 1440 aa4.86□□□□□ -1.63
DMD-230ENST00000620040 BCL2L13Q9BXK5 485 aa4.86□□□□□ -1.63
DMD-230ENST00000620040 AP1ARQ63HQ0 302 aa4.86□□□□□ -1.63
DMD-230ENST00000620040 EVC2Q86UK5 1308 aa4.86□□□□□ -1.63
DMD-230ENST00000620040 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.86□□□□□ -1.63
DMD-230ENST00000620040 G3V3G9 751 aa4.86□□□□□ -1.63
DMD-230ENST00000620040 SLC3A2P08195 630 aaKnown RBP4.86□□□□□ -1.63
DMD-230ENST00000620040 ARHGAP25P42331 645 aa4.86□□□□□ -1.63
DMD-230ENST00000620040 EIF5P55010 431 aaKnown RBP4.86□□□□□ -1.63
DMD-230ENST00000620040 DCAF8Q5TAQ9 597 aa4.86□□□□□ -1.63
DMD-230ENST00000620040 CEP57Q86XR8 500 aa4.86□□□□□ -1.63
DMD-230ENST00000620040 ARFGAP2Q8N6H7 521 aa4.86□□□□□ -1.63
DMD-230ENST00000620040 CTDP1Q9Y5B0 961 aaPredicted RBP4.86□□□□□ -1.63
DMD-230ENST00000620040 FGFR1OPO95684 399 aaKnown RBP4.86□□□□□ -1.63
DMD-230ENST00000620040 LRCH2Q5VUJ6 765 aa4.86□□□□□ -1.63
DMD-230ENST00000620040 LRPPRCP42704 1394 aaKnown RBP4.86□□□□□ -1.63
DMD-230ENST00000620040 MYO5CQ9NQX4 1742 aa4.86□□□□□ -1.63
DMD-230ENST00000620040 PIP4K2BP78356 416 aa4.86□□□□□ -1.63
DMD-230ENST00000620040 STX1AQ16623 288 aa4.86□□□□□ -1.63
DMD-230ENST00000620040 CCDC57Q2TAC2 916 aa4.86□□□□□ -1.63
DMD-230ENST00000620040 FKBP15Q5T1M5 1219 aa4.86□□□□□ -1.63
DMD-230ENST00000620040 STIM2Q9P246 746 aa4.86□□□□□ -1.63
DMD-230ENST00000620040 FHOD3Q2V2M9 1422 aa4.86□□□□□ -1.63
DMD-230ENST00000620040 YEATS4O95619 227 aa4.86□□□□□ -1.63
DMD-230ENST00000620040 KRT18P05783 430 aaKnown RBP4.86□□□□□ -1.63
DMD-230ENST00000620040 VCXQ9H320 206 aa4.86□□□□□ -1.63
DMD-230ENST00000620040 PANK3Q9H999 370 aa4.86□□□□□ -1.63
DMD-230ENST00000620040 LACTBP83111 547 aaPredicted RBP4.86□□□□□ -1.63
DMD-230ENST00000620040 CCDC113Q9H0I3 377 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms