RNA–Protein interactions for RNA: ENST00000619408.1

TVP23A-211, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-211ENST00000619408 PHKG2P15735 406 aa9.74□□□□□ -0.85
TVP23A-211ENST00000619408 PDE3AQ14432 1141 aa9.74□□□□□ -0.85
TVP23A-211ENST00000619408 ZKSCAN2Q63HK3 967 aa9.74□□□□□ -0.85
TVP23A-211ENST00000619408 MPRIPQ6WCQ1 1025 aa9.74□□□□□ -0.85
TVP23A-211ENST00000619408 IFNL2Q8IZJ0 200 aa9.74□□□□□ -0.85
TVP23A-211ENST00000619408 CRBNQ96SW2 442 aa9.74□□□□□ -0.85
TVP23A-211ENST00000619408 ZBTB47Q9UFB7 747 aaPredicted RBP9.74□□□□□ -0.85
TVP23A-211ENST00000619408 SOS1Q07889 1333 aaPredicted RBP9.74□□□□□ -0.85
TVP23A-211ENST00000619408 SPATA31A6Q5VVP1 1343 aa9.74□□□□□ -0.85
TVP23A-211ENST00000619408 IPO8O15397 1037 aaKnown RBP9.73□□□□□ -0.85
TVP23A-211ENST00000619408 RRP9O43818 475 aaKnown RBP9.73□□□□□ -0.85
TVP23A-211ENST00000619408 VAMP4O75379 141 aa9.73□□□□□ -0.85
TVP23A-211ENST00000619408 FTSJ3Q8IY81 847 aaKnown RBP9.73□□□□□ -0.85
TVP23A-211ENST00000619408 TSPYL6Q8N831 410 aa9.73□□□□□ -0.85
TVP23A-211ENST00000619408 C8orf58Q8NAV2 365 aa9.73□□□□□ -0.85
TVP23A-211ENST00000619408 EXOC6Q8TAG9 804 aa9.73□□□□□ -0.85
TVP23A-211ENST00000619408 ZCRB1Q8TBF4 217 aaKnown RBP9.73□□□□□ -0.85
TVP23A-211ENST00000619408 SSH1Q8WYL5 1049 aa9.73□□□□□ -0.85
TVP23A-211ENST00000619408 KDM3BQ7LBC6 1761 aa9.73□□□□□ -0.85
TVP23A-211ENST00000619408 KDM6AO15550 1401 aaPredicted RBP9.73□□□□□ -0.85
TVP23A-211ENST00000619408 MRC1P22897 1456 aa9.72□□□□□ -0.85
TVP23A-211ENST00000619408 BTBD11A6QL63 1104 aa9.72□□□□□ -0.85
TVP23A-211ENST00000619408 ELL2O00472 640 aaPredicted RBP9.72□□□□□ -0.85
TVP23A-211ENST00000619408 HOXD11P31277 338 aaPredicted RBP9.72□□□□□ -0.85
TVP23A-211ENST00000619408 BRPF1P55201 1214 aaPredicted RBP9.72□□□□□ -0.85
TVP23A-211ENST00000619408 C20orf194Q5TEA3 1177 aa9.72□□□□□ -0.85
TVP23A-211ENST00000619408 DCAF5Q96JK2 942 aa9.72□□□□□ -0.85
TVP23A-211ENST00000619408 LGR6Q9HBX8 967 aa9.72□□□□□ -0.85
TVP23A-211ENST00000619408 MIS18AQ9NYP9 233 aa9.72□□□□□ -0.85
TVP23A-211ENST00000619408 SCN11AQ9UI33 1791 aa9.72□□□□□ -0.85
TVP23A-211ENST00000619408 VIRMAQ69YN4 1812 aaKnown RBP9.72□□□□□ -0.85
TVP23A-211ENST00000619408 WNK3Q9BYP7 1800 aa9.72□□□□□ -0.85
TVP23A-211ENST00000619408 CHMP4AQ9BY43 222 aa9.71□□□□□ -0.86
TVP23A-211ENST00000619408 DISP2A7MBM2 1401 aa9.71□□□□□ -0.86
TVP23A-211ENST00000619408 SLIT2O94813 1529 aa9.71□□□□□ -0.86
TVP23A-211ENST00000619408 SIPA1L3O60292 1781 aaPredicted RBP9.7□□□□□ -0.86
TVP23A-211ENST00000619408 CYP27B1O15528 508 aa9.7□□□□□ -0.86
TVP23A-211ENST00000619408 KRT24Q2M2I5 525 aa9.7□□□□□ -0.86
TVP23A-211ENST00000619408 ATF7IPQ6VMQ6 1270 aa9.7□□□□□ -0.86
TVP23A-211ENST00000619408 DZIP1LQ8IYY4 767 aaKnown RBP9.7□□□□□ -0.86
TVP23A-211ENST00000619408 CDCA7Q9BWT1 371 aaPredicted RBP9.7□□□□□ -0.86
TVP23A-211ENST00000619408 STK31Q9BXU1 1019 aa9.7□□□□□ -0.86
TVP23A-211ENST00000619408 SLC52A2Q9HAB3 445 aa9.7□□□□□ -0.86
TVP23A-211ENST00000619408 NOB1Q9ULX3 412 aaKnown RBP9.7□□□□□ -0.86
TVP23A-211ENST00000619408 THRAP3Q9Y2W1 955 aaKnown RBP9.7□□□□□ -0.86
TVP23A-211ENST00000619408 SHANK3Q9BYB0 1731 aa9.7□□□□□ -0.86
TVP23A-211ENST00000619408 HOXB7P09629 217 aa9.69□□□□□ -0.86
TVP23A-211ENST00000619408 CABP4P57796 275 aa9.69□□□□□ -0.86
TVP23A-211ENST00000619408 MEX3CQ5U5Q3 659 aaKnown RBP9.69□□□□□ -0.86
TVP23A-211ENST00000619408 CCDC30Q5VVM6 783 aa9.69□□□□□ -0.86
TVP23A-211ENST00000619408 TNS2Q63HR2 1409 aa9.69□□□□□ -0.86
TVP23A-211ENST00000619408 B4GALNT3Q6L9W6 998 aa9.69□□□□□ -0.86
TVP23A-211ENST00000619408 MRPL50Q8N5N7 158 aaKnown RBP9.69□□□□□ -0.86
TVP23A-211ENST00000619408 PANK1Q8TE04 598 aa9.69□□□□□ -0.86
TVP23A-211ENST00000619408 ARHGAP45Q92619 1136 aa9.69□□□□□ -0.86
TVP23A-211ENST00000619408 CCDC9Q9Y3X0 531 aaKnown RBP9.69□□□□□ -0.86
TVP23A-211ENST00000619408 LRP6O75581 1613 aa9.68□□□□□ -0.86
TVP23A-211ENST00000619408 SPATA31A1Q5TZJ5 1347 aa9.68□□□□□ -0.86
TVP23A-211ENST00000619408 TCERG1O14776 1098 aaKnown RBP9.68□□□□□ -0.86
TVP23A-211ENST00000619408 TRIM27P14373 513 aa9.68□□□□□ -0.86
TVP23A-211ENST00000619408 HSPA1LP34931 641 aa9.68□□□□□ -0.86
TVP23A-211ENST00000619408 EIF4A1P60842 406 aaKnown RBP9.68□□□□□ -0.86
TVP23A-211ENST00000619408 AAMPQ13685 434 aa9.68□□□□□ -0.86
TVP23A-211ENST00000619408 TTC5Q8N0Z6 440 aa9.68□□□□□ -0.86
TVP23A-211ENST00000619408 DDX54Q8TDD1 881 aaKnown RBP9.68□□□□□ -0.86
TVP23A-211ENST00000619408 CNKSR2Q8WXI2 1034 aa9.68□□□□□ -0.86
TVP23A-211ENST00000619408 CLUAP1Q96AJ1 413 aa9.68□□□□□ -0.86
TVP23A-211ENST00000619408 NGLY1Q96IV0 654 aa9.68□□□□□ -0.86
TVP23A-211ENST00000619408 C8orf37Q96NL8 207 aa9.68□□□□□ -0.86
TVP23A-211ENST00000619408 API5Q9BZZ5 524 aaKnown RBP9.68□□□□□ -0.86
TVP23A-211ENST00000619408 COG6Q9Y2V7 657 aa9.68□□□□□ -0.86
TVP23A-211ENST00000619408 PTPRCP08575 1304 aa9.67□□□□□ -0.86
TVP23A-211ENST00000619408 SPATA31A5Q5VU36 1347 aa9.67□□□□□ -0.86
TVP23A-211ENST00000619408 SPATA31A7Q8IWB4 1347 aa9.67□□□□□ -0.86
TVP23A-211ENST00000619408 ERVV-2B6SEH9 535 aa9.67□□□□□ -0.86
TVP23A-211ENST00000619408 MVPQ14764 893 aaKnown RBP9.67□□□□□ -0.86
TVP23A-211ENST00000619408 NKX1-1Q15270 411 aaPredicted RBP9.67□□□□□ -0.86
TVP23A-211ENST00000619408 HDGFL1Q5TGJ6 251 aa9.67□□□□□ -0.86
TVP23A-211ENST00000619408 UNC5CLQ8IV45 518 aa9.67□□□□□ -0.86
TVP23A-211ENST00000619408 ITPRIPQ8IWB1 547 aa9.67□□□□□ -0.86
TVP23A-211ENST00000619408 CHMP4BQ9H444 224 aaKnown RBP9.67□□□□□ -0.86
TVP23A-211ENST00000619408 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.67□□□□□ -0.86
TVP23A-211ENST00000619408 RLBP1P12271 317 aa9.66□□□□□ -0.86
TVP23A-211ENST00000619408 ZNF790Q6PG37 636 aa9.66□□□□□ -0.86
TVP23A-211ENST00000619408 NFATC2IPQ8NCF5 419 aa9.66□□□□□ -0.86
TVP23A-211ENST00000619408 DDX19BQ9UMR2 479 aa9.66□□□□□ -0.86
TVP23A-211ENST00000619408 TNNQ9UQP3 1299 aa9.66□□□□□ -0.86
TVP23A-211ENST00000619408 ABCC4O15439 1325 aa9.65□□□□□ -0.86
TVP23A-211ENST00000619408 PAPPAQ13219 1627 aa9.65□□□□□ -0.86
TVP23A-211ENST00000619408 EXOC5O00471 708 aa9.65□□□□□ -0.86
TVP23A-211ENST00000619408 KCNQ3O43525 872 aa9.65□□□□□ -0.86
TVP23A-211ENST00000619408 SLC4A2P04920 1241 aa9.65□□□□□ -0.86
TVP23A-211ENST00000619408 NCLP19338 710 aaKnown RBP9.65□□□□□ -0.86
TVP23A-211ENST00000619408 VPS72Q15906 364 aa9.65□□□□□ -0.86
TVP23A-211ENST00000619408 BARGINQ6ZT62 677 aa9.65□□□□□ -0.86
TVP23A-211ENST00000619408 BCL9LQ86UU0 1499 aa9.65□□□□□ -0.87
TVP23A-211ENST00000619408 TOGARAM1Q9Y4F4 1720 aa9.65□□□□□ -0.87
TVP23A-211ENST00000619408 DDB1Q16531 1140 aa9.64□□□□□ -0.87
TVP23A-211ENST00000619408 FNBP4Q8N3X1 1017 aaPredicted RBP9.64□□□□□ -0.87
TVP23A-211ENST00000619408 TMEM57Q8N5G2 664 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms